Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,731,477	C→T	intergenic (‑320/+123)	rrsG ← / ← clpB	16S ribosomal RNA/ClpB chaperone

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,731,477	0	C	T	100.0%	228.0 / NA	64	intergenic (‑320/+123)	rrsG/clpB	16S ribosomal RNA/ClpB chaperone
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (33/31);  total (33/31)

ATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGG  >  NC_000913/2731342‑2731610                                                                                                                                        |                                                                                                                                      ataCGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGa                                                                                                                                   >  2:957708/1‑140 (MQ=255)     gCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAg                                                                                                                               >  2:679590/1‑140 (MQ=255)     gCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAg                                                                                                                               >  2:321213/1‑140 (MQ=255)     gCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAg                                                                                                                               >  1:553198/1‑140 (MQ=255)     gCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAAGAGAACCACGCCGACCCGGCGGCGTGTTTGCCGTCGTTCCGTGACACTGGCGGCGCATTATAGGGAGTTATTCCGGTCTGTCAAg                                                                                                                               >  2:108780/1‑140 (MQ=18)          cccGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGaaa                                                                                                                          <  2:809243/140‑1 (MQ=255)                 cAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATaa                                                                                                                   <  1:931508/140‑1 (MQ=255)                   gagTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATaaaa                                                                                                                 <  1:321213/140‑1 (MQ=255)                        aaGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACttt                                                                                                            >  1:841508/1‑140 (MQ=255)                         aGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTa                                                                                                           >  1:1058094/1‑140 (MQ=255)                         aGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTa                                                                                                           >  1:480942/1‑140 (MQ=255)                               tCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTc                                                                                                     <  1:911077/140‑1 (MQ=255)                                cTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCg                                                                                                    <  2:326811/140‑1 (MQ=255)                                cTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCg                                                                                                    >  1:326811/1‑140 (MQ=255)                                  ttGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCAGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCt                                                                                                  <  2:134238/140‑1 (MQ=255)                                   tGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTc                                                                                                 <  2:357186/140‑1 (MQ=255)                                        ttCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACttt                                                                                            >  1:1003141/1‑140 (MQ=255)                                             tGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAgg                                                                                       >  2:177108/1‑140 (MQ=255)                                               ttGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCa                                                                                     >  1:405768/1‑140 (MQ=255)                                                tGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCaa                                                                                    <  1:549114/140‑1 (MQ=255)                                                 gagaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCaaa                                                                                   <  2:841508/140‑1 (MQ=255)                                                  agaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCaaaa                                                                                  >  1:686651/1‑140 (MQ=255)                                                   gaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAAc                                                                                 <  2:480942/140‑1 (MQ=255)                                                   gaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAAc                                                                                 <  2:389583/140‑1 (MQ=255)                                                   gaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAAc                                                                                 <  2:908507/140‑1 (MQ=255)                                                   gaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAAc                                                                                 <  1:666404/140‑1 (MQ=255)                                                   gaTTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTCGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAAc                                                                                 <  1:1063802/140‑1 (MQ=255)                                                     ttCTCAGGATAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACAt                                                                               <  2:1119906/140‑1 (MQ=255)                                                         cAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTa                                                                           >  1:755582/1‑140 (MQ=255)                                                         cAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTa                                                                           >  2:438010/1‑140 (MQ=255)                                                          aGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTaa                                                                          >  2:672414/1‑140 (MQ=255)                                                            gagaACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAat                                                                        <  2:512290/140‑1 (MQ=255)                                                              gaACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAatat                                                                      >  1:667805/1‑140 (MQ=255)                                                              gaACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAatat                                                                      <  2:755582/140‑1 (MQ=255)                                                                 ccccGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGt                                                                   >  1:504256/1‑140 (MQ=255)                                                                    cgccgACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCtt                                                                <  2:1003141/140‑1 (MQ=255)                                                                    cgccgACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCtt                                                                >  1:574212/1‑140 (MQ=255)                                                                    cgccgACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCtt                                                                <  1:679590/140‑1 (MQ=255)                                                                      ccgACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCtttt                                                              <  1:583739/140‑1 (MQ=255)                                                                      ccgACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCtttt                                                              <  1:115688/140‑1 (MQ=255)                                                                           ccGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTc                                                         >  1:331897/1‑140 (MQ=255)                                                                            cggcggCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCt                                                        <  1:957708/140‑1 (MQ=255)                                                                            cggcggCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCt                                                        <  2:563660/140‑1 (MQ=255)                                                                            cggcggCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCt                                                        <  2:331897/140‑1 (MQ=255)                                                                            cggcggCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCt                                                        <  1:1114121/140‑1 (MQ=255)                                                                              gcggcgGGTTTGCCGTTGTTCCGTGCCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTaa                                                      >  2:858810/1‑140 (MQ=255)                                                                                    tgtTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTtata                                                >  2:378122/1‑140 (MQ=255)                                                                                             ttgttCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAAc                                       <  2:124041/140‑1 (MQ=255)                                                                                                      gtCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGa                              <  2:430554/140‑1 (MQ=255)                                                                                                      gtCAGTGGTGGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGa                              >  2:148981/1‑140 (MQ=255)                                                                                                          gtggtgGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAggg                          >  2:964664/1‑140 (MQ=255)                                                                                                          gtggtgGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAggg                          <  2:1058094/140‑1 (MQ=255)                                                                                                          gtggtgGCGCATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAggg                          >  1:702031/1‑140 (MQ=255)                                                                                                                gcgcATTATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGtt                    <  2:936568/140‑1 (MQ=255)                                                                                                                     ttATAGGGAGTTATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATc               <  1:108780/140‑1 (MQ=255)                                                                                                                             aataactCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTg       >  2:862819/7‑140 (MQ=255)                                                                                                                               ttATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGa     >  2:522808/1‑140 (MQ=255)                                                                                                                               ttATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGa     >  1:698525/1‑140 (MQ=255)                                                                                                                                tATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTa                 >  2:426087/1‑127 (MQ=255)                                                                                                                                tATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTa                 <  1:426087/127‑1 (MQ=255)                                                                                                                                tATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGAc    >  1:637321/1‑140 (MQ=255)                                                                                                                                tATTCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCG‑TTTATCATTTACTGGACg   >  1:32564/1‑140 (MQ=255)                                                                                                                                  ttCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACgg  >  2:1104721/1‑140 (MQ=255)                                                                                                                                  ttCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACgg  <  1:788789/140‑1 (MQ=255)                                                                                                                                  ttCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACgg  >  2:7553/1‑140 (MQ=255)                                                                                                                                  ttCCGGTCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACgg  >  1:461220/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                      ATACGCCTTCCCGCTACAGAGTCAAGCATTTCTTTGCTTTTCTCTGTTGAGATTCTCAGGAGAACCCCGCCGACCCGGCGGCGTGTTTGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTCCGGCCTGACAAGCGAAAAATATAAAAACTTTATCGTTCGCTCACTTTTCAGGCAAAACATCTTAAATATAGTCTTTTCCGTCTAACTTATAGACAAAAACGAGCCCCGAAGGGCTCGTTTTATCATTTACTGGACGG  >  NC_000913/2731342‑2731610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑