Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,119,003	G→A	A15V (GCG→GTG)	yceJ ←	putative cytochrome b561

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,119,003	0	G	A	100.0%	292.7 / NA	83	A15V (GCG→GTG)	yceJ	putative cytochrome b561
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (48/35);  total (48/35)

TCATTAACAAAATACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCGCAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGATATTTATTT  >  NC_000913/1118866‑1119139                                                                                                                                          |                                                                                                                                         tcatTAACAAAATACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCcaca                                                                                                                                        >  2:748997/1‑140 (MQ=255)     tAACAAAATACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGata                                                                                                                                    <  1:856822/140‑1 (MQ=255)     tAACAAAATACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGata                                                                                                                                    <  1:676104/140‑1 (MQ=255)     tAACAAAATACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCATAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGata                                                                                                                                    <  1:1064211/140‑1 (MQ=255)           aaTACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAacac                                                                                                                              >  2:432381/1‑140 (MQ=255)            aTACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACAcc                                                                                                                             >  2:875170/1‑140 (MQ=255)              aCCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCAt                                                                                                                           >  2:1055968/1‑140 (MQ=255)               ccGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATa                                                                                                                          <  1:1186685/140‑1 (MQ=255)                  aTGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTAAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCg                                                                                                                       <  2:486454/140‑1 (MQ=255)                          aTGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAgggg                                                                                                               <  1:748997/140‑1 (MQ=255)                          aTGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAgggg                                                                                                               <  1:487063/140‑1 (MQ=255)                                ttCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTtg                                                                                                         >  1:857251/1‑140 (MQ=255)                                ttCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTtg                                                                                                         >  1:299275/1‑140 (MQ=255)                                  cGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTtgtg                                                                                                       >  2:1081421/1‑140 (MQ=255)                                    ggTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGaa                                                                                                     <  2:1261/140‑1 (MQ=255)                                    ggTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGaa                                                                                                     <  1:432381/140‑1 (MQ=255)                                     gTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAAt                                                                                                    <  1:771718/140‑1 (MQ=255)                                          ttGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACAt                                                                                               >  2:2690/1‑140 (MQ=255)                                               aTACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTAt                                                                                                            >  2:239758/1‑122 (MQ=255)                                               aTACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTAt                                                                                                            <  1:239758/122‑1 (MQ=255)                                                   cAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGa                                                                                                  >  2:1055269/1‑128 (MQ=255)                                                   cAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGa                                                                                                  <  1:1055269/128‑1 (MQ=255)                                                     gCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCa                                                                                    >  2:1101491/1‑140 (MQ=255)                                                     gCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCa                                                                                    >  2:259628/1‑140 (MQ=255)                                                     gCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCa                                                                                    >  1:632312/1‑140 (MQ=255)                                                     gCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCa                                                                                    >  1:880654/1‑140 (MQ=255)                                                     gCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGCATTTGTGAATGACATAAGAGCATCCa                                                                                    >  2:113055/1‑140 (MQ=255)                                                       cATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCaaa                                                                                  >  1:612731/1‑140 (MQ=255)                                                       cATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCaaa                                                                                  >  2:326024/1‑140 (MQ=255)                                                          cGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACg                                                                               >  2:1065903/1‑140 (MQ=255)                                                                   tGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCga                                                                      <  1:797880/140‑1 (MQ=255)                                                                    gAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgag                                                                     <  2:857251/140‑1 (MQ=255)                                                                     aGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgaga                                                                    >  2:943398/1‑140 (MQ=255)                                                                     aGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgaga                                                                    >  2:216168/1‑140 (MQ=255)                                                                     aGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgaga                                                                    >  2:998836/1‑140 (MQ=255)                                                                     aGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgaga                                                                    >  1:708605/1‑140 (MQ=255)                                                                      gCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgagag                                                                   <  1:856162/140‑1 (MQ=255)                                                                      gCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgagag                                                                   >  2:594740/1‑140 (MQ=255)                                                                       cGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGCATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCgagaga                                                                  >  2:305360/1‑140 (MQ=255)                                                                           aCCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGagaaaga                                                              >  1:312702/1‑140 (MQ=255)                                                                           aCCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGagaaaga                                                              >  1:71837/1‑140 (MQ=255)                                                                           aCCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGagaaaga                                                              >  2:174983/1‑140 (MQ=255)                                                                           aCCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGagaaaga                                                              >  2:1166565/1‑140 (MQ=255)                                                                           aCCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGagaaaga                                                              >  1:410929/1‑140 (MQ=255)                                                                                 cacaGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATgg                                                        >  2:143361/1‑140 (MQ=255)                                                                                   caGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCg                                                      >  1:703004/1‑140 (MQ=255)                                                                                   caGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCg                                                      <  2:459057/140‑1 (MQ=255)                                                                                     gACCTAAAGCAAACATGCCGTAGACAATAATTGCGC‑TAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCgtgt                                                   >  1:643022/1‑140 (MQ=255)                                                                                       ccTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTc                                                  <  2:150974/140‑1 (MQ=255)                                                                                          aaaGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGga                                               >  1:140440/1‑140 (MQ=255)                                                                                          aaaGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGga                                               >  2:190710/1‑140 (MQ=255)                                                                                          aaaGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGga                                               >  2:857889/1‑140 (MQ=255)                                                                                           aaGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCg                                                      >  2:478004/1‑132 (MQ=255)                                                                                           aaGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCg                                                      <  1:478004/132‑1 (MQ=255)                                                                                           aaGCAAACATGCCGTAGACAATAATTGCGC‑TAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGgaga                                             <  2:643022/140‑1 (MQ=255)                                                                                             gCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAgaa                                            <  1:943398/140‑1 (MQ=255)                                                                                                aaCATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAgaatga                                         >  1:859245/1‑140 (MQ=255)                                                                                                aaCATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAgaatga                                         >  1:115825/1‑140 (MQ=255)                                                                                                 aCATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAgaatgaa                                        >  2:167852/1‑140 (MQ=255)                                                                                                        gTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAac                                 <  1:143361/140‑1 (MQ=255)                                                                                                        gTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAac                                 <  2:1138796/140‑1 (MQ=255)                                                                                                        gTAGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAac                                 <  1:875170/140‑1 (MQ=255)                                                                                                          aGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAacac                               <  1:1019081/140‑1 (MQ=255)                                                                                                          aGACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAacac                               <  1:2690/140‑1 (MQ=255)                                                                                                           gACAATAATTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAG‑AAATGGCGTGTCGGAGAATGAATTGCAACACaa                             <  1:174983/140‑1 (MQ=255)                                                                                                                 aatTGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATa                        <  1:167852/140‑1 (MQ=255)                                                                                                                   ttGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAGAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAAc                      <  1:754210/140‑1 (MQ=255)                                                                                                                   ttGCGCTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAAc                      >  1:786412/1‑140 (MQ=255)                                                                                                                      cgcTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAAc                      <  2:368537/137‑1 (MQ=255)                                                                                                                      cgcTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAAc                      >  1:368537/1‑137 (MQ=255)                                                                                                                        cTTAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAAtt                 >  1:769726/1‑140 (MQ=255)                                                                                                                          tAGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGa               >  1:789063/1‑140 (MQ=255)                                                                                                                           aGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGaa              <  1:422428/140‑1 (MQ=255)                                                                                                                           aGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGaa              <  2:789063/140‑1 (MQ=255)                                                                                                                           aGCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGaa              <  1:348705/140‑1 (MQ=255)                                                                                                                            gCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAAt                         >  1:378684/1‑128 (MQ=255)                                                                                                                            gCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAAt                         <  2:378684/128‑1 (MQ=255)                                                                                                                            gCCAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAAt             <  1:1166565/140‑1 (MQ=255)                                                                                                                             ccAATGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATg            <  1:1081421/140‑1 (MQ=255)                                                                                                                                aTGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGata         >  1:703582/1‑140 (MQ=255)                                                                                                                                 tGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGatat        >  2:729463/1‑140 (MQ=255)                                                                                                                                 tGGAAGGCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGatat        >  1:10334/1‑140 (MQ=255)                                                                                                                                      ggCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGAtatttatt   >  1:366248/1‑140 (MQ=255)                                                                                                                                       gCCACAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGATatttattt  >  1:259170/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                         TCATTAACAAAATACCGATGCTTTTATGCAGTTCGGGTGCTTTGTGATACCAGCCATCGTAATAACTGAGCGTGACCATCCACAGACCTAAAGCAAACATGCCGTAGACAATAATTGCGCTTAGCCAATGGAAGGCCGCAGATATAACACCATAGCGTTCAGGGGTATTTGTGAATGACATAAGTGCATCCAAAACGAATTTGCGAGAGAAAGAAAATGGCGTGTCGGAGAATGAATTGCAACACAAAAATAACAAATTGAATGATATTTATTT  >  NC_000913/1118866‑1119139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑