BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	527,423	C→A	A1388E (GCA→GAA)	rhsD →	protein RhsD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	527,423	0	C	A	100.0%	417.4 / NA	116	A1388E (GCA→GAA)	rhsD	protein RhsD
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (53/63); total (53/63)

Only 100 of 117 total aligned reads displayed.

AAAATGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGCATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTTTATTAG  >  NC_000913/527289‑527559

aaaaTGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAAtttt                                                                                                                                     >  2:898814/1‑140 (MQ=255)

  aaTGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTAt                                                                                                                                   <  2:372414/140‑1 (MQ=255)

    tGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTAtct                                                                                                                                 <  2:516147/140‑1 (MQ=255)

     gTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTAtctc                                                                                                                                >  1:1207526/1‑140 (MQ=255)

      tCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCg                                                                                                                               <  1:389444/140‑1 (MQ=255)

        ccACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATTGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCa                                                                                                                             <  1:1081561/140‑1 (MQ=255)

         cacaGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCaa                                                                                                                            <  2:1207526/140‑1 (MQ=255)

          acaGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAac                                                                                                                           >  1:260673/1‑140 (MQ=255)

            aGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAacac                                                                                                                         <  1:1008443/140‑1 (MQ=255)

            aGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAacac                                                                                                                         <  1:57742/140‑1 (MQ=255)

              gTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAac                                                                                                                           <  1:643694/136‑1 (MQ=255)

              gTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAac                                                                                                                           >  2:643694/1‑136 (MQ=255)

                 cAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCaa                                                                                                                            >  2:87767/1‑132 (MQ=255)

                  aGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATg                                                                                                                   <  1:287729/140‑1 (MQ=255)

                    aTAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGa                                                                                                                 <  2:706046/140‑1 (MQ=255)

                      agagTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACg                                                                                                               >  2:647710/1‑140 (MQ=255)

                      agagTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACg                                                                                                               >  1:215913/1‑140 (MQ=255)

                        agTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATTAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGAt                                                                                                             >  2:931265/1‑140 (MQ=255)

                        agTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGAt                                                                                                             >  1:986314/1‑140 (MQ=255)

                             ctgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAg                                                                                                        >  1:289427/1‑140 (MQ=255)

                             ctgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAg                                                                                                        >  2:1061907/1‑140 (MQ=255)

                             ctgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAg                                                                                                        >  2:84910/1‑140 (MQ=255)

                             ctgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAg                                                                                                        >  2:925094/1‑140 (MQ=255)

                              tgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       <  1:987470/140‑1 (MQ=255)

                              tgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       <  1:676600/140‑1 (MQ=255)

                              tgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       >  2:866117/1‑140 (MQ=255)

                              tgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       >  1:389970/1‑140 (MQ=255)

                              tgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       >  1:1041700/1‑140 (MQ=255)

                              tgctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTCTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       <  1:286794/140‑1 (MQ=255)

                                ctTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGgcg                                                                                                     <  2:215913/140‑1 (MQ=255)

                                  tATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       <  1:1146123/136‑1 (MQ=255)

                                   aTCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCtt                                                                                                  <  1:599036/140‑1 (MQ=255)

                                   aTCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCtt                                                                                                  <  2:652585/140‑1 (MQ=255)

                                        aCTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       >  1:1031209/1‑130 (MQ=255)

                                        aCTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAgg                                                                                                       <  2:1031209/130‑1 (MQ=255)

                                         cTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTtaataat                                                                                            >  1:469678/1‑140 (MQ=255)

                                            aCGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATaaa                                                                                         <  1:1061907/140‑1 (MQ=255)

                                            aCGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATaaa                                                                                         >  1:159816/1‑140 (MQ=255)

                                            aCGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATaaa                                                                                         >  2:683364/1‑140 (MQ=255)

                                             cGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAg                                                                                        <  1:102989/140‑1 (MQ=255)

                                             cGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAg                                                                                        <  1:29804/140‑1 (MQ=255)

                                             cGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAg                                                                                        <  1:647710/140‑1 (MQ=255)

                                              ggTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAgg                                                                                       >  2:74042/1‑140 (MQ=255)

                                              ggTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAgg                                                                                       >  2:429790/1‑140 (MQ=255)

                                                tGCAGATAGTCATGGCAATTATGTTGATGATCTCTTTTCAAGTAGCGACAAAAACCTTGTAAGAAGGAAAGATAATAAACTTGAAGAATTTTATCTCGCAACACCTGATGGACCATTTGAGGCGCTTAACAATAAAGgag                                                                                     >  2:216670/1‑140 (MQ=255)

                                                 gCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGgaga                                                                                    >  2:162933/1‑140 (MQ=255)

                                                  cAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGaa                                                                                   >  2:191620/1‑140 (MQ=255)

                                                  cAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGaa                                                                                   >  1:958679/1‑140 (MQ=255)

                                                   aGATAGTCATGGCGATTTTGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGaaa                                                                                  >  2:277615/1‑139 (MQ=255)

                                                         tCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATAttt                                                                            <  1:898814/140‑1 (MQ=255)

                                                          cATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATAtttt                                                                           >  2:402260/1‑140 (MQ=255)

                                                          cATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATAtttt                                                                           >  1:162019/1‑140 (MQ=255)

                                                           aTGGCGATTATGTTGATTAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATAttttt                                                                          <  1:931265/140‑1 (MQ=255)

                                                           aTGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATAttttt                                                                          <  1:1114889/140‑1 (MQ=255)

                                                            tGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTa                                                                         >  1:1155640/1‑140 (MQ=255)

                                                              gCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTAt                                                                        >  2:669136/1‑139 (MQ=255)

                                                              gCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATc                                                                       >  1:602290/1‑140 (MQ=255)

                                                              gCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATc                                                                       <  2:983615/140‑1 (MQ=255)

                                                               cGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCa                                                                      >  2:121251/1‑140 (MQ=255)

                                                                 aTTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGa                                                                    >  2:433884/1‑140 (MQ=255)

                                                                 aTTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGa                                                                    >  2:759754/1‑140 (MQ=255)

                                                                      gTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAg                                                               <  2:194591/140‑1 (MQ=255)

                                                                           tgaATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTcc                                                          <  1:191620/140‑1 (MQ=255)

                                                                             aaTTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCg                                                        <  1:178001/140‑1 (MQ=255)

                                                                             aaTTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCg                                                        <  2:289427/140‑1 (MQ=255)

                                                                             aaTTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCg                                                        <  2:469678/140‑1 (MQ=255)

                                                                             aaTTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCg                                                        <  2:1155640/140‑1 (MQ=255)

                                                                               tttttttCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCggg                                                      <  2:1133292/140‑1 (MQ=255)

                                                                                ttttttCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGa                                                     <  1:747835/140‑1 (MQ=255)

                                                                                    ttCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGa                                                 <  1:759754/140‑1 (MQ=255)

                                                                                      cAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGt                                               <  2:958679/140‑1 (MQ=255)

                                                                                        aGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTc                                             <  2:20949/140‑1 (MQ=255)

                                                                                        aGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTc                                             <  1:1139724/140‑1 (MQ=255)

                                                                                        aGTAGCAATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTc                                             <  1:941074/140‑1 (MQ=255)

                                                                                         gTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAg                                                >  2:379149/1‑136 (MQ=255)

                                                                                         gTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAg                                                <  1:379149/136‑1 (MQ=255)

                                                                                         gTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCa                                            >  2:977993/1‑140 (MQ=255)

                                                                                         gTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCa                                            <  1:925094/140‑1 (MQ=255)

                                                                                         gTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCa                                            <  1:84910/140‑1 (MQ=255)

                                                                                          tAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAg                                           <  2:602290/140‑1 (MQ=255)

                                                                                            gCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTa                                         >  2:962813/1‑140 (MQ=255)

                                                                                               aTAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGc                                      <  1:866117/140‑1 (MQ=255)

                                                                                                tAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGACATAGTGTCCCGGGATTGAGTTCAGTATGCa                                     <  2:819276/140‑1 (MQ=255)

                                                                                                tAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCa                                     <  1:977993/140‑1 (MQ=255)

                                                                                                tAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCa                                     <  2:159816/140‑1 (MQ=255)

                                                                                                        ttGTAAGAAGTAAAGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTAt                             <  2:307844/140‑1 (MQ=255)

                                                                                                                     aGATAATAATCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAAtttt                >  2:546704/1‑140 (MQ=255)

                                                                                                                        taataaTCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGt             <  1:478367/140‑1 (MQ=255)

                                                                                                                        taataaTCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGt             <  2:692524/140‑1 (MQ=255)

                                                                                                                        taataaTCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGt             <  1:762233/140‑1 (MQ=255)

                                                                                                                         aataatCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTg            >  1:1138839/1‑140 (MQ=255)

                                                                                                                          ataatCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGc           >  2:986242/1‑140 (MQ=255)

                                                                                                                              tCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCtttt       >  2:435255/1‑140 (MQ=255)

                                                                                                                              tCTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCtttt       >  2:623472/1‑140 (MQ=255)

                                                                                                                               cTTGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTtta      <  1:416023/140‑1 (MQ=255)

                                                                                                                                ttGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTttat     >  1:1221136/1‑140 (MQ=255)

                                                                                                                                ttGAAGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTttat     >  2:1209294/1‑140 (MQ=255)

                                                                                                                                   aaGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTttatt    <  1:1218461/138‑1 (MQ=255)

                                                                                                                                   aaGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTttatt    >  2:1218461/1‑138 (MQ=255)

                                                                                                                                   aaGAATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTTTATTAg  <  1:546704/140‑1 (MQ=255)

AAAATGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGCATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAATTTTAGTGCTTTTATTAG  >  NC_000913/527289‑527559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`