BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,801,792	C→A	G70C (GGT→TGT)	waaJ ←	UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,801,792	0	C	A	100.0%	454.0 / NA	126	G70C (GGT→TGT)	waaJ	UDP‑glucose:(glucosyl)LPS alpha‑1,2‑glucosyltransferase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (60/66); total (60/66)

Only 100 of 129 total aligned reads displayed.

TGCAAATAAACGGAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACCATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAGAA  >  NC_000913/3801655‑3801928

tGCAAATAAACGGAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACaat                                                                                                                                        >  2:684558/1‑140 (MQ=255)

       aaaCGGAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATtata                                                                                                                                 <  1:772298/140‑1 (MQ=255)

       aaaCGGAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATtata                                                                                                                                 <  1:684558/140‑1 (MQ=255)

            gAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACAt                                                                                                                            >  1:834674/1‑140 (MQ=255)

            gAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACAt                                                                                                                            <  1:241383/140‑1 (MQ=255)

             aaGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATc                                                                                                                           <  2:319385/140‑1 (MQ=255)

                  cATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCaa                                                                                                                      <  1:531142/140‑1 (MQ=255)

                   aTTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCaa                                                                                                                      >  1:737633/1‑139 (MQ=255)

                      gCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCaataat                                                                                                                  >  1:301309/1‑140 (MQ=255)

                       ctctTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAataata                                                                                                                 >  2:417781/1‑140 (MQ=255)

                       ctctTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAataata                                                                                                                 >  1:838513/1‑140 (MQ=255)

                       ctctTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGGGTTAGTGCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAATAACCAATCATTATAAACATCAGCAataata                                                                                                                 >  2:787840/1‑140 (MQ=255)

                         ctTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAAtata                                                                                                               <  1:587144/140‑1 (MQ=255)

                            gACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATaaaa                                                                                                            >  1:373500/1‑140 (MQ=255)

                              ccAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAAt                                                                                                          <  1:96328/140‑1 (MQ=255)

                              ccAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAAt                                                                                                          <  1:862490/140‑1 (MQ=255)

                               cAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATc                                                                                                         <  1:943011/140‑1 (MQ=255)

                               cAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATc                                                                                                         <  2:524507/140‑1 (MQ=255)

                                 gACCTGTGTACAGGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCaa                                                                                                       >  2:373628/1‑140 (MQ=255)

                                 gACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCaa                                                                                                       >  1:284235/1‑140 (MQ=255)

                                 gACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCaa                                                                                                       >  2:585397/1‑140 (MQ=255)

                                 gACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCaa                                                                                                       >  2:56487/1‑140 (MQ=255)

                                 gACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCaa                                                                                                       >  2:1116194/1‑140 (MQ=255)

                                 gACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCaa                                                                                                       >  2:262722/1‑140 (MQ=255)

                                  aCCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAg                                                                                                      >  1:542858/1‑140 (MQ=255)

                                       tgtACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTaa                                                                                                 >  2:504680/1‑140 (MQ=255)

                                          aCAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAatat                                                                                              <  1:262722/140‑1 (MQ=255)

                                          aCAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAatat                                                                                              <  1:831554/140‑1 (MQ=255)

                                            aaGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAAt                                                                                                          <  2:616400/126‑1 (MQ=255)

                                            aaGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGt                                                                                            >  1:1022270/1‑140 (MQ=255)

                                              ggCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCg                                                                                          >  2:414945/1‑140 (MQ=255)

                                              ggCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCg                                                                                          >  1:780127/1‑140 (MQ=255)

                                               gCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGa                                                                                         <  2:1117881/140‑1 (MQ=255)

                                               gCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGa                                                                                         <  1:417781/140‑1 (MQ=255)

                                               gCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGa                                                                                         <  2:780127/140‑1 (MQ=255)

                                                 aaGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGatt                                                                                       >  1:328460/1‑140 (MQ=255)

                                                 aaGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGa                                                                                         >  1:556610/1‑138 (MQ=255)

                                                 aaGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGa                                                                                         <  2:556610/138‑1 (MQ=255)

                                                   gCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGattat                                                                                     >  1:630260/1‑140 (MQ=255)

                                                   gCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGattat                                                                                     >  1:219198/1‑140 (MQ=255)

                                                   gCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGattat                                                                                     >  1:180196/1‑140 (MQ=255)

                                                   gCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGa                                                                                         >  2:481322/1‑136 (MQ=255)

                                                    cACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGattatt                                                                                    <  2:630260/140‑1 (MQ=255)

                                                       tGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAg                                                                                 <  1:1146369/140‑1 (MQ=255)

                                                       tGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAg                                                                                 <  2:328460/140‑1 (MQ=255)

                                                       tGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAg                                                                                 <  1:373628/140‑1 (MQ=255)

                                                       tGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAg                                                                                 <  1:164894/140‑1 (MQ=255)

                                                            cTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACaa                                                                            <  1:1069903/140‑1 (MQ=255)

                                                             ttATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAAt                                                                           >  2:1007002/1‑140 (MQ=255)

                                                               aTCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATtg                                                                         <  1:414945/140‑1 (MQ=255)

                                                                   gtgtTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATtgatgt                                                                     >  2:669278/1‑140 (MQ=255)

                                                                    tgtTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATtgatgtg                                                                    <  2:284235/140‑1 (MQ=255)

                                                                    tgtTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATtgatgtg                                                                    <  2:373500/140‑1 (MQ=255)

                                                                         aTTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  2:1158374/140‑1 (MQ=255)

                                                                         aTTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  1:1152/140‑1 (MQ=255)

                                                                         aTTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  1:481797/140‑1 (MQ=255)

                                                                         aTTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  2:1022270/140‑1 (MQ=255)

                                                                              atataACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGaaa                                                             >  1:1055619/1‑137 (MQ=255)

                                                                              atataACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGaaa                                                             <  2:1055619/137‑1 (MQ=255)

                                                                              atataACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               >  2:900633/1‑135 (MQ=255)

                                                                              atataACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAacac                                                          >  1:164859/1‑140 (MQ=255)

                                                                              atataACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAacac                                                          >  2:323304/1‑140 (MQ=255)

                                                                                   aCGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               >  2:1013765/1‑130 (MQ=255)

                                                                                   aCGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  1:1013765/130‑1 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  1:400658/129‑1 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  2:698345/129‑1 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               >  1:698345/1‑129 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTacac                                                    >  1:714062/1‑140 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTacac                                                    >  2:1060986/1‑140 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTacac                                                    >  2:509683/1‑140 (MQ=255)

                                                                                    cGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTacac                                                    >  2:925626/1‑140 (MQ=255)

                                                                                       gATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATTTAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCAt                                                 >  1:511759/1‑140 (MQ=255)

                                                                                       gATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               >  2:458925/1‑126 (MQ=255)

                                                                                       gATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGa                                                               <  1:458925/126‑1 (MQ=255)

                                                                                       gATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCAt                                                 >  2:955519/1‑140 (MQ=255)

                                                                                       gATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCAt                                                 <  2:744771/140‑1 (MQ=255)

                                                                                       gATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCAt                                                 >  2:151701/1‑140 (MQ=255)

                                                                                         ttCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCa                                               >  2:68893/1‑140 (MQ=255)

                                                                                         ttCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCa                                               >  2:444377/1‑140 (MQ=255)

                                                                                         ttCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCa                                               >  2:28104/1‑140 (MQ=255)

                                                                                         ttCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCa                                               >  1:343948/1‑140 (MQ=255)

                                                                                           cTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAg                                             <  1:669278/140‑1 (MQ=255)

                                                                                                 tGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAAtt                                       <  1:323304/140‑1 (MQ=255)

                                                                                                    ttttGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGc                                    <  1:714428/140‑1 (MQ=255)

                                                                                                      ttGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCAt                                  >  1:564262/1‑140 (MQ=255)

                                                                                                        gCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCg                                <  1:68893/140‑1 (MQ=255)

                                                                                                         ctctGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGa                               <  1:585397/140‑1 (MQ=255)

                                                                                                            tGCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGacac                            >  1:970386/1‑140 (MQ=255)

                                                                                                             gCAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACAcc                           >  2:223247/1‑140 (MQ=255)

                                                                                                              cAAGCTTTGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCa                          >  1:587130/1‑140 (MQ=255)

                                                                                                                    ttGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCa                    <  2:39580/140‑1 (MQ=255)

                                                                                                                     tGCAATTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCaa                   <  1:504680/140‑1 (MQ=255)

                                                                                                                        aaTTTTTTGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACAt                >  2:1127911/1‑140 (MQ=255)

                                                                                                                           tttttGAAAAAAACAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTa             <  1:1189422/140‑1 (MQ=255)

                                                                                                                                 aaaaaaaCAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACAtt       <  1:223247/140‑1 (MQ=255)

                                                                                                                                    aaaaCAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAg    <  2:180196/140‑1 (MQ=255)

                                                                                                                                      aaCAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAGaa  <  2:714062/140‑1 (MQ=255)

                                                                                                                                      aaCAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAGaa  <  1:955519/140‑1 (MQ=255)

                                                                                                                                      aaCAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAGaa  <  1:968519/140‑1 (MQ=255)

                                                                                                                                      aaCAATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAGaa  <  2:337912/140‑1 (MQ=255)

TGCAAATAAACGGAAGTACATTGCTCTTGACCAGACCTGTGTACAAGGCAAGCACTGGAGCTTATCAGTGTTAATTCTATATAACGTGATTCTTAATTGGTTTTGCTCTGCAAGCTTTGCAATTTTTTGAAAAAAACCATCATTATAAACATCAGCAATAATATAAAAATCAAGATTAATATGTCGATTATTTAGGACAATTGATGTGATGGAAACACCTACACCATCAAGATAATTAGCATCGACACCATAGGCAACATTTAAACATTCAGAA  >  NC_000913/3801655‑3801928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`