Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,011,485	C→A	L9M (CTG→ATG)	yqeA →	putative amino acid kinase YqeA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,011,485	0	C	A	100.0%	290.5 / NA	81	L9M (CTG→ATG)	yqeA	putative amino acid kinase YqeA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (50/31);  total (50/31)

TTACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCCTGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTGGG  >  NC_000913/3011349‑3011618                                                                                                                                         |                                                                                                                                      ttACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATgg                                                                                                                                    >  2:796543/1‑140 (MQ=255)  tACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATggg                                                                                                                                   <  1:173222/140‑1 (MQ=255)  tACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATggg                                                                                                                                   <  2:1036681/140‑1 (MQ=255)         aaaGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAAt                                                                                                                            >  1:574375/1‑140 (MQ=255)           aGCCGGGCGTGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATgc                                                                                                                          >  2:460381/1‑140 (MQ=255)                 gCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTggg                                                                                                                    >  2:937595/1‑140 (MQ=255)                      gTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGAACTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATg                                                                                                               >  1:152057/1‑140 (MQ=255)                        cGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGAc                                                                                                             <  1:1206089/140‑1 (MQ=255)                           ttCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTg                                                                                                          >  1:959665/1‑140 (MQ=255)                                    cGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCaa                                                                                                 >  2:1335742/1‑140 (MQ=255)                                    cGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCaa                                                                                                 >  2:316329/1‑140 (MQ=255)                                         aCCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGaa                                                                                            <  1:937595/140‑1 (MQ=255)                                                     tcccGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAAt                                                                                >  1:414908/1‑140 (MQ=255)                                                      cccGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCg                                                                                        >  2:1315939/1‑131 (MQ=255)                                                      cccGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCg                                                                                        <  1:1315939/131‑1 (MQ=255)                                                           gCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTtc                                                                          >  2:1266933/1‑140 (MQ=255)                                                            ctctAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTtct                                                                         <  2:1089985/140‑1 (MQ=255)                                                              ctAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCa                                                                       <  1:283926/140‑1 (MQ=255)                                                                aaCCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAgg                                                                     <  2:414908/140‑1 (MQ=255)                                                                 aCCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGc                                                                    <  1:796543/140‑1 (MQ=255)                                                                 aCCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGc                                                                    <  1:316329/140‑1 (MQ=255)                                                                     cTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAAtt                                                                <  1:1078606/140‑1 (MQ=255)                                                                      tGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACt                                                                            >  1:1048427/1‑127 (MQ=255)                                                                      tGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACt                                                                            <  2:1048427/127‑1 (MQ=255)                                                                      tGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAAttg                                                               >  2:510483/1‑140 (MQ=255)                                                                      agCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAAttg                                                               >  2:1256740/2‑140 (MQ=255)                                                                       gCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAAttgt                                                              >  2:982144/1‑140 (MQ=255)                                                                       gCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAAttgt                                                              >  2:803645/1‑140 (MQ=255)                                                                        ccAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAAttgtt                                                             >  1:90496/1‑140 (MQ=255)                                                                            ggATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGAtt                                                         >  1:757099/1‑140 (MQ=255)                                                                             gATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGAttt                                                        >  2:1229438/1‑140 (MQ=255)                                                                                cTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAAt                                                     >  1:790722/1‑140 (MQ=255)                                                                                cTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGAAATTGTTGATTTAAt                                                     <  1:1256740/140‑1 (MQ=255)                                                                                   taCACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGc                                                  >  1:546163/1‑140 (MQ=255)                                                                                    acacAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGcc                                                 <  2:959665/140‑1 (MQ=255)                                                                                       caATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAg                                              >  1:777458/1‑140 (MQ=255)                                                                                        aaTCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAgg                                             >  2:592013/1‑140 (MQ=255)                                                                                        aaTCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAgg                                             >  2:439018/1‑140 (MQ=255)                                                                                        aaTCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAgg                                             >  2:45293/1‑140 (MQ=255)                                                                                        aaTCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAgg                                             >  1:282858/1‑140 (MQ=255)                                                                                        aaTCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAgg                                             >  2:1060055/1‑140 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTaa                                                      >  1:867148/1‑129 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTaa                                                      <  2:867148/129‑1 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGcc                                                 >  2:1409587/1‑134 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGcc                                                 <  1:1409587/134‑1 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGa                                           >  1:824500/1‑140 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGa                                           >  2:187812/1‑140 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGa                                           >  1:330138/1‑140 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGa                                           >  1:1194168/1‑140 (MQ=255)                                                                                          tCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGa                                           >  1:725579/1‑140 (MQ=255)                                                                                           cAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGAc                                          >  1:1087465/1‑140 (MQ=255)                                                                                             aGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACAt                                        >  1:1225150/1‑140 (MQ=255)                                                                                                    tgagtgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACa                                         <  1:11133/132‑1 (MQ=255)                                                                                                    tgagtgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACa                                         >  2:11133/1‑132 (MQ=255)                                                                                                    tgagtgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTa                                 >  1:231644/1‑140 (MQ=255)                                                                                                    tgagtgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTa                                 >  1:816044/1‑140 (MQ=255)                                                                                                       gtgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCg                              <  2:1087465/140‑1 (MQ=255)                                                                                                       gtgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCg                              <  2:816044/140‑1 (MQ=255)                                                                                                        tgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGt                             >  1:1236507/1‑140 (MQ=255)                                                                                                        tgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGt                             <  1:439018/140‑1 (MQ=255)                                                                                                        tgagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGt                             >  2:1394808/1‑140 (MQ=255)                                                                                                         gagGAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTc                            >  2:869268/1‑140 (MQ=255)                                                                                                           ggAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGt                                   <  2:902539/131‑1 (MQ=255)                                                                                                           ggAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGt                                   >  1:902539/1‑131 (MQ=255)                                                                                                           ggAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCAc                          <  1:1335742/140‑1 (MQ=255)                                                                                                           ggAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCAc                          >  1:311342/1‑140 (MQ=255)                                                                                                            gAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACt                         <  1:942678/140‑1 (MQ=255)                                                                                                            gAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACt                         >  1:1009942/1‑140 (MQ=255)                                                                                                            gAAAAATGAGTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACt                         <  1:1266933/140‑1 (MQ=255)                                                                                                                     gTAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAAc                >  1:161037/1‑140 (MQ=255)                                                                                                                      tAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACg               >  1:7809/1‑140 (MQ=255)                                                                                                                      tAAGAAAATTGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACg               >  1:1394602/1‑140 (MQ=255)                                                                                                                              ttGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAg       >  1:328125/1‑140 (MQ=255)                                                                                                                               tGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAgg      <  2:790722/140‑1 (MQ=255)                                                                                                                               tGTTCTCGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAgg      <  1:869268/140‑1 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  <  1:1248169/140‑1 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  <  1:460381/140‑1 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  <  1:592013/140‑1 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  >  2:1248169/1‑140 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  <  2:1236507/140‑1 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  >  1:1007453/1‑140 (MQ=255)                                                                                                                                   ctcGCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTggg  <  1:982144/140‑1 (MQ=255)                                                                                                                                      gCCATGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAgg      <  1:1289439/133‑1 (MQ=255)                                                                                                                                         |                                                                                                                                      TTACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAACCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCCTGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTGGG  >  NC_000913/3011349‑3011618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑