BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,094	A→G	intergenic (‑186/‑26)	marC ← / → marR	inner membrane protein MarC/DNA‑binding transcriptional repressor MarR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,094	0	A	G	100.0%	439.4 / NA	112	intergenic (‑186/‑26)	marC/marR	inner membrane protein MarC/DNA‑binding transcriptional repressor MarR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (59/53); total (59/53)

Only 100 of 113 total aligned reads displayed.

GGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGA  >  NC_000913/1618957‑1619229

ggTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCt                                                                                                                                       <  2:318661/140‑1 (MQ=255)

 gTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTa                                                                                                                                      >  2:641428/1‑140 (MQ=255)

   aaaCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCt                                                                                                                                       >  1:537585/1‑137 (MQ=255)

     aCAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTa                                                                                                                                  >  1:1301641/1‑140 (MQ=255)

          gATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGc                                                                                                                             >  1:455271/1‑140 (MQ=255)

          gATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGc                                                                                                                             <  1:641428/140‑1 (MQ=255)

          gATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGc                                                                                                                             >  2:165407/1‑140 (MQ=255)

               aGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGc                                                                                                                             <  1:177086/135‑1 (MQ=255)

               aGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGc                                                                                                                             >  2:177086/1‑135 (MQ=255)

               aGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAggg                                                                                                                        >  1:953033/1‑140 (MQ=255)

                gtgtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGc                                                                                                                       <  1:994509/140‑1 (MQ=255)

                 tgtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCa                                                                                                                      >  2:29512/1‑140 (MQ=255)

                  gtCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCaa                                                                                                                     <  1:433152/140‑1 (MQ=255)

                    cACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACt                                                                                                                   >  1:451655/1‑140 (MQ=255)

                     aCTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTa                                                                                                                  >  1:1098029/1‑140 (MQ=255)

                           tagctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGa                                                                                                            >  2:408832/1‑140 (MQ=255)

                           tagctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGa                                                                                                            >  2:683264/1‑140 (MQ=255)

                           tagctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGa                                                                                                            <  2:895748/140‑1 (MQ=255)

                           tagctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGa                                                                                                            >  2:921388/1‑140 (MQ=255)

                            agctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGaa                                                                                                           <  1:1011247/140‑1 (MQ=255)

                              ctagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGaaaa                                                                                                         <  1:893848/140‑1 (MQ=255)

                               tagcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAg                                                                                                        <  2:605607/140‑1 (MQ=255)

                                 gcCTTGCATCGCATTGAACAAAACTTGTACCGATTTAGCAAAACGTTGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTa                                                                                                      >  2:1262324/1‑140 (MQ=255)

                                 gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTa                                                                                                      >  2:745781/1‑140 (MQ=255)

                                 gcCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTa                                                                                                      <  1:389071/140‑1 (MQ=255)

                                  ccTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTAc                                                                                                     <  1:1262324/140‑1 (MQ=255)

                                  ccTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTAc                                                                                                     >  1:111474/1‑140 (MQ=255)

                                  ccTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTAc                                                                                                     <  1:262580/140‑1 (MQ=255)

                                   cTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTAcc                                                                                                    >  2:1253515/1‑140 (MQ=255)

                                    ttGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCa                                                                                                   <  1:29512/140‑1 (MQ=255)

                                    ttGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCa                                                                                                   <  1:805810/140‑1 (MQ=255)

                                     tGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAg                                                                                                  >  1:746335/1‑140 (MQ=255)

                                     tGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAg                                                                                                  >  2:604466/1‑140 (MQ=255)

                                        aTCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGa                                                                                               >  2:398375/1‑140 (MQ=255)

                                         tCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGAt                                                                                              <  1:165407/140‑1 (MQ=255)

                                            cATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTg                                                                                           >  1:804895/1‑140 (MQ=255)

                                              ttGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGtt                                                                                         <  2:368569/140‑1 (MQ=255)

                                                 aaCAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCaa                                                                                      <  2:1064625/140‑1 (MQ=255)

                                                         ttGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                              <  1:429129/140‑1 (MQ=255)

                                                           gAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAattatt                                                                            >  1:779117/1‑140 (MQ=255)

                                                             aCCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTcc                                                                          >  1:546071/1‑140 (MQ=255)

                                                              ccGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCa                                                                         <  1:478674/140‑1 (MQ=255)

                                                              ccGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCa                                                                         <  1:948546/140‑1 (MQ=255)

                                                                 aTTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTg                                                                      >  1:139551/1‑140 (MQ=255)

                                                                  tttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTgg                                                                     <  1:408832/140‑1 (MQ=255)

                                                                   ttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTggg                                                                    <  2:451655/140‑1 (MQ=255)

                                                                   ttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTggg                                                                    <  2:42069/140‑1 (MQ=255)

                                                                   ttAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTggg                                                                    <  2:546071/140‑1 (MQ=255)

                                                                        aaaaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCt                                                               <  2:813528/140‑1 (MQ=255)

                                                                         aaaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCtt                                                              <  1:745781/140‑1 (MQ=255)

                                                                         aaaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCtt                                                              <  2:215758/140‑1 (MQ=255)

                                                                          aaCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTa                                                             <  1:1253515/140‑1 (MQ=255)

                                                                           aCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTaa                                                            <  2:492709/140‑1 (MQ=255)

                                                                           aCGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTaa                                                            <  2:779117/140‑1 (MQ=255)

                                                                            cGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAt                                                           >  2:1170969/1‑140 (MQ=255)

                                                                               ggCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCa                                                        <  1:398375/140‑1 (MQ=255)

                                                                               ggCATCAGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCa                                                        >  2:716450/1‑140 (MQ=255)

                                                                                 cATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCata                                                      <  1:180132/140‑1 (MQ=255)

                                                                                    cGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATgg                                                   >  1:1156601/1‑140 (MQ=255)

                                                                                      gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGtt                                                 <  1:921388/140‑1 (MQ=255)

                                                                                      gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGtt                                                 >  1:599548/1‑140 (MQ=255)

                                                                                      gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGtt                                                 >  1:1024587/1‑140 (MQ=255)

                                                                                      gTCAATTCATTCATTTGACTTATACTTGCCTGGGCAA‑‑‑TATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAt                                              <  2:595604/140‑1 (MQ=255)

                                                                                         aaTTCATTCATTTGACTTATGCTTGCCTCGGCAATATTATCTCATACAGATAAATACTTGCCCGTGCTTCTAATGTTAAAAGTGCCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAAACAATATGGTTAAt                                              <  2:1163444/140‑1 (MQ=255)

                                                                                         aaTTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAt                                              <  2:179291/140‑1 (MQ=255)

                                                                                         aaTTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAt                                              <  1:716450/140‑1 (MQ=255)

                                                                                         aaTTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAAt                                              <  1:779216/140‑1 (MQ=255)

                                                                                            tcattcatTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCag                                           <  2:787255/140‑1 (MQ=255)

                                                                                              attcattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCagaa                                         <  2:1098029/140‑1 (MQ=255)

                                                                                                tcattTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCACTTAATCCATATGGTTAATCagaaga                                       >  2:712937/1‑140 (MQ=255)

                                                                                                   tttGACTTATACTTGCCTGGGCAATATTATCCCCTGTAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGaagaaag                                    >  2:863482/1‑140 (MQ=255)

                                                                                                     tGACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGAt                                  >  2:289757/1‑140 (MQ=255)

                                                                                                      gACTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATc                                 <  1:251340/140‑1 (MQ=255)

                                                                                                        cTTATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGc                               >  1:389788/1‑140 (MQ=255)

                                                                                                         ttATACTTGCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGcc                              <  2:881780/140‑1 (MQ=255)

                                                                                                                 gCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                      >  2:429050/1‑140 (MQ=255)

                                                                                                                 gCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                      >  2:850575/1‑140 (MQ=255)

                                                                                                                 gCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                      >  2:586067/1‑140 (MQ=255)

                                                                                                                 gCCTGGGCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCATAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAAc                      >  1:714355/1‑140 (MQ=255)

                                                                                                                      ggCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTa                 >  2:364280/1‑140 (MQ=255)

                                                                                                                      ggCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTa                 >  2:304774/1‑140 (MQ=255)

                                                                                                                      ggCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTa                 >  2:138395/1‑140 (MQ=255)

                                                                                                                       gCAATATTATCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTAt                <  1:242221/140‑1 (MQ=255)

                                                                                                                           tattatCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGt            >  2:702085/1‑140 (MQ=255)

                                                                                                                           tattatCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGt            <  1:1151943/140‑1 (MQ=255)

                                                                                                                           tattatCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGt            <  1:304774/140‑1 (MQ=255)

                                                                                                                           tattatCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGt            <  2:599548/140‑1 (MQ=255)

                                                                                                                                tCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg       <  2:793741/140‑1 (MQ=255)

                                                                                                                                tCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg       >  1:839108/1‑140 (MQ=255)

                                                                                                                                tCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg       <  2:804895/140‑1 (MQ=255)

                                                                                                                                tCCCCTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCg       <  1:166386/140‑1 (MQ=255)

                                                                                                                                  cccTGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCt     >  2:762286/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  1:17279/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  1:1127073/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  1:509047/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  1:564722/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  1:1134418/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  1:844408/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  2:886370/1‑140 (MQ=255)

                                                                                                                                     tGCAGCTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa  >  2:269595/1‑140 (MQ=255)

GGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGA  >  NC_000913/1618957‑1619229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`