| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,213,155 | G→T | D37Y (GAT→TAT) | rpoD → | RNA polymerase, sigma 70 (sigma D) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,213,155 | 0 | G | T | 97.8% | 310.0 / ‑0.0 | 89 | D37Y (GAT→TAT) | rpoD | RNA polymerase, sigma 70 (sigma D) factor |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (44/43); total (45/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
CTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGC > NC_000913/3213019‑3213290 | cTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTAtt < 2:526729/140‑1 (MQ=255) aTGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcag > 2:764581/1‑140 (MQ=255) aTGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcag > 2:633969/1‑140 (MQ=255) tGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcaga > 1:412461/1‑140 (MQ=255) tGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcag < 2:1049374/139‑1 (MQ=255) tGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcag > 1:1049374/1‑139 (MQ=255) gAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcagat < 1:794832/140‑1 (MQ=255) aaaTAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcagatc < 1:38299/140‑1 (MQ=255) tAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATtcagatcaga > 1:852960/1‑140 (MQ=255) aaGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTcagatcagat > 1:50370/1‑140 (MQ=255) aaGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTcagatcagat > 2:758906/1‑140 (MQ=255) aGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCagatcagatc > 2:1130942/1‑140 (MQ=255) aGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCagatcagatc > 2:654749/1‑140 (MQ=255) tgtgGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGa > 1:1233319/1‑140 (MQ=255) tgtgGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGa < 1:970968/140‑1 (MQ=255) tgtgGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGACATCGTCTATTCAGATCAGATCGa > 2:452228/1‑140 (MQ=255) tgtgGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCCAGGCAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGa > 2:1032509/1‑140 (MQ=255) tgGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAg > 2:261140/1‑140 (MQ=255) ggATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGa < 1:499024/140‑1 (MQ=255) ggATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGa < 1:705829/140‑1 (MQ=255) gATACCGTCTTATGGAGCAAAACCCGCAGTCTCAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAc > 1:139379/1‑140 (MQ=255) gATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGa < 2:1127325/139‑1 (MQ=255) gATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGa > 1:1127325/1‑139 (MQ=255) gATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGAc > 2:614863/1‑140 (MQ=255) aTACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAca < 1:633969/140‑1 (MQ=255) aTACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAca < 1:1010324/140‑1 (MQ=255) tACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGTCGGAAGATATCGTCTATTCAGATCAGATCGAAGAcat < 2:540933/140‑1 (MQ=255) ccGTCTTATGGAGCAAAACCCGCAGTCTCAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAcatca < 2:139379/140‑1 (MQ=255) cGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAcatcat > 2:480687/1‑140 (MQ=255) cGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAcatcat > 1:908392/1‑140 (MQ=255) cGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGAcatcat > 2:508032/1‑140 (MQ=255) cTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCa > 1:366848/1‑140 (MQ=255) ttATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCaa < 2:1233319/140‑1 (MQ=255) tATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCCACCGCGGTAAGGAGCAAGGATATCTGACCTATGCCGAGGTCAATGGCCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCaaa < 2:523761/140‑1 (MQ=255) aTGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAAt < 1:1007536/140‑1 (MQ=255) aGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATc > 2:258596/1‑140 (MQ=255) aGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATc > 2:79108/1‑140 (MQ=255) aGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATc > 1:575887/1‑140 (MQ=255) cAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATcc < 2:903227/130‑1 (MQ=255) cAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATcc > 1:903227/1‑130 (MQ=255) cAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCaa > 1:456922/1‑140 (MQ=255) cAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCaa > 2:111382/1‑140 (MQ=255) aaCCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGa > 2:51674/1‑140 (MQ=255) ccGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACAt < 2:1050239/140‑1 (MQ=255) gCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATgg > 1:1045117/1‑140 (MQ=255) gCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATgg < 1:480687/140‑1 (MQ=255) cacaGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCAtt < 2:366848/140‑1 (MQ=255) cacaGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCAtt < 2:575887/140‑1 (MQ=255) caGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCa < 2:828816/140‑1 (MQ=255) aGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAg < 1:258596/140‑1 (MQ=255) gCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAgg < 1:869107/140‑1 (MQ=255) gCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAgg < 2:1129565/140‑1 (MQ=255) tGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTg < 1:764581/140‑1 (MQ=255) cttcttGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGga < 1:508032/140‑1 (MQ=255) ttcttGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGgaa < 2:1207429/140‑1 (MQ=255) ttcttGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGgaa < 1:188457/140‑1 (MQ=255) tcttGTCACCCGGGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGgaag > 2:286476/1‑140 (MQ=255) tCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCa < 1:1110984/140‑1 (MQ=255) cGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGa < 2:852960/140‑1 (MQ=255) cGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGa < 1:269601/140‑1 (MQ=255) tAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCg < 1:1167554/140‑1 (MQ=255) tAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCg < 1:614863/140‑1 (MQ=255) aaGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGCCCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAAGGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCga < 2:143735/140‑1 (MQ=255) aaGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCga < 1:51674/140‑1 (MQ=255) aaGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGACATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCga < 1:452228/140‑1 (MQ=255) gAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCgatga > 1:858108/1‑140 (MQ=255) cAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCt > 1:483985/1‑140 (MQ=255) cAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCt > 1:153818/1‑140 (MQ=255) cAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCt > 2:694096/1‑140 (MQ=255) ggCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGAt > 2:1029036/1‑140 (MQ=255) aTCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATgctg < 2:1153296/140‑1 (MQ=255) tCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCg < 2:1223495/125‑1 (MQ=255) tCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCg > 1:1223495/1‑125 (MQ=255) tCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATgctgg > 2:247427/1‑140 (MQ=255) tCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATgctgg > 2:536470/1‑140 (MQ=255) tCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATgctgg > 2:542863/1‑140 (MQ=255) tCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATgctgg > 2:687312/1‑140 (MQ=255) gCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAacac > 1:660395/1‑140 (MQ=255) gCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAacac > 2:702731/1‑140 (MQ=255) cGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACcg < 1:1029036/140‑1 (MQ=255) cGAGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACcg < 1:702731/140‑1 (MQ=255) aGGTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACcgcg < 1:1032509/140‑1 (MQ=255) gTCAATGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCAGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGa < 1:758906/140‑1 (MQ=255) aTGACCATCTGCCGGAGGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGaa > 2:827397/1‑140 (MQ=255) aTGACCATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGaa < 2:456922/140‑1 (MQ=255) ccATCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGAtg < 2:412461/140‑1 (MQ=255) tCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGAtgctg > 1:1234572/1‑140 (MQ=255) tCTGCCGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGAtgctg > 2:533969/1‑140 (MQ=255) ccGGAAGATATCGTCTATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGa > 2:882240/1‑140 (MQ=255) cgtctATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCgcgc < 1:654749/140‑1 (MQ=255) cgtctATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCgcgc > 1:1252852/1‑140 (MQ=255) cgtctATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCgcgc < 1:261140/140‑1 (MQ=255) | CTCATGAAATAAGTGTGGATACCGTCTTATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGC > NC_000913/3213019‑3213290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |