Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,597,702	T→C	intergenic (‑142/‑282)	livK ← / → panZ	L‑leucine/L‑phenylalanine ABC transporter periplasmic binding protein/PanD maturation factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,597,702	0	T	C	100.0%	353.6 / NA	91	intergenic (‑142/‑282)	livK/panZ	L‑leucine/L‑phenylalanine ABC transporter periplasmic binding protein/PanD maturation factor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (42/49);  total (42/49)

AAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATGC  >  NC_000913/3597565‑3597835                                                                                                                                          |                                                                                                                                      aaaaaTCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAAccc                                                                                                                                     >  1:1053946/1‑140 (MQ=255)       ccccATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTAttt                                                                                                                               >  2:244818/1‑140 (MQ=255)        cccATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTAtttt                                                                                                                              >  2:1220909/1‑140 (MQ=255)           aTTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCa                                                                                                                           <  1:367797/140‑1 (MQ=255)             tCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGt                                                                                                                         <  2:79944/140‑1 (MQ=255)             tCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGt                                                                                                                         <  2:1053946/140‑1 (MQ=255)             tCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGt                                                                                                                         <  2:67938/140‑1 (MQ=255)             tCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGt                                                                                                                         <  2:279837/140‑1 (MQ=255)                 gATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGt                                                                                                                         >  1:551610/1‑136 (MQ=255)                 gATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGt                                                                                                                         <  2:551610/136‑1 (MQ=255)                 gATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGAt                                                                                                                     <  1:100402/140‑1 (MQ=255)                    gttgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTaa                                                                                                                  <  2:582485/140‑1 (MQ=255)                    gttgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTaa                                                                                                                  <  1:805296/140‑1 (MQ=255)                      tgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGa                                                                                                                <  1:54016/140‑1 (MQ=255)                      tgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGa                                                                                                                <  1:1147956/140‑1 (MQ=255)                      tgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGa                                                                                                                <  1:82961/140‑1 (MQ=255)                      tgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGATTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAg                                                                                                                 >  1:149870/1‑139 (MQ=255)                      tgtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGATTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAg                                                                                                                 <  2:149870/139‑1 (MQ=255)                       gtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTTCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCg                                                                                                                       <  1:640863/132‑1 (MQ=255)                       gtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTTCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCg                                                                                                                       >  2:640863/1‑132 (MQ=255)                       gtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTaa                                                                                                                  <  1:68748/137‑1 (MQ=255)                       gtgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTaa                                                                                                                  >  2:68748/1‑137 (MQ=255)                        tgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGa                                                                                                                <  2:1138778/138‑1 (MQ=255)                        tgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGa                                                                                                                >  1:1138778/1‑138 (MQ=255)                        tgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAAc                                                                                                              <  1:1226522/140‑1 (MQ=255)                        tgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAAc                                                                                                              <  2:762477/140‑1 (MQ=255)                        tgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAAc                                                                                                              <  2:937007/140‑1 (MQ=255)                        tgttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAAc                                                                                                              <  2:596982/140‑1 (MQ=255)                         gttgCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACa                                                                                                             >  1:647659/1‑140 (MQ=255)                             cTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGata                                                                                                         <  2:611416/140‑1 (MQ=255)                             cTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGata                                                                                                         >  1:1032450/1‑140 (MQ=255)                             cTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGat                                                                                                          <  1:448586/139‑1 (MQ=255)                             cTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGat                                                                                                          >  2:448586/1‑139 (MQ=255)                             cTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTACTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGata                                                                                                         <  2:1172216/140‑1 (MQ=255)                                            ttAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTAt                                                                                          >  1:1313915/1‑140 (MQ=255)                                            ttAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTAt                                                                                          >  1:390904/1‑140 (MQ=255)                                            ttAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATCTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTAt                                                                                          >  1:281302/1‑140 (MQ=255)                                             tAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTAtt                                                                                         <  2:611320/140‑1 (MQ=255)                                                       gACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATaaa                                                                               >  1:552115/1‑140 (MQ=255)                                                        aCTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAAc                                                                              >  2:743522/1‑140 (MQ=255)                                                                ttttttATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGaaaaaa                                                                      <  2:390904/140‑1 (MQ=255)                                                                ttttttATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGaaaaaa                                                                      <  2:1032450/140‑1 (MQ=255)                                                                      ataCTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCt                                                                >  2:495346/1‑140 (MQ=255)                                                                          tGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            <  1:244818/140‑1 (MQ=255)                                                                           gCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            <  2:90279/139‑1 (MQ=255)                                                                           gCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            >  1:90279/1‑139 (MQ=255)                                                                           gCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTc                                                           >  1:426359/1‑140 (MQ=255)                                                                            cACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            >  2:1089955/1‑138 (MQ=255)                                                                            cACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            <  1:1089955/138‑1 (MQ=255)                                                                            cACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCa                                                          >  2:52689/1‑140 (MQ=255)                                                                            cACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCa                                                          >  1:848576/1‑140 (MQ=255)                                                                            cACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTA‑TTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAg                                                         >  1:1292931/1‑140 (MQ=255)                                                                             aCTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAg                                                         <  2:1313915/140‑1 (MQ=255)                                                                                 tttttGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATa                                                     >  1:1039767/1‑140 (MQ=255)                                                                                      gCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTc                                                           >  1:348001/1‑129 (MQ=255)                                                                                      gCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTc                                                           <  2:348001/129‑1 (MQ=255)                                                                                      gCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATa                                                >  2:269655/1‑140 (MQ=255)                                                                                        cTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAAc                                              <  1:269655/140‑1 (MQ=255)                                                                                         tGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACg                                             >  1:686933/1‑140 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            <  1:637164/123‑1 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGt                                                            >  2:637164/1‑123 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGc                                           >  2:727938/1‑140 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGc                                           >  2:1019359/1‑140 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGc                                           >  1:8818/1‑140 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGc                                           >  1:693048/1‑140 (MQ=255)                                                                                           tCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGc                                           >  1:609460/1‑140 (MQ=255)                                                                                              gATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGcaca                                        <  2:503552/140‑1 (MQ=255)                                                                                                   aGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAggg                                   <  2:426359/140‑1 (MQ=255)                                                                                                   aGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAggg                                   <  2:552115/140‑1 (MQ=255)                                                                                                     gggTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAggg                                   >  2:667050/1‑138 (MQ=255)                                                                                                     gggTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAggg                                   <  1:667050/138‑1 (MQ=255)                                                                                                     gggTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCg                                 <  2:848576/140‑1 (MQ=255)                                                                                                       gTTAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGa                               >  2:375255/1‑140 (MQ=255)                                                                                                        ttAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGaa                              <  2:8818/140‑1 (MQ=255)                                                                                                        ttAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGaa                              <  1:1036880/140‑1 (MQ=255)                                                                                                        ttAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGaa                              <  1:52689/140‑1 (MQ=255)                                                                                                        ttAGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGaa                              <  1:495346/140‑1 (MQ=255)                                                                                                          aGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGaa                              <  1:14202/138‑1 (MQ=255)                                                                                                          aGCGCAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGaa                              >  2:14202/1‑138 (MQ=255)                                                                                                            cgcAGTA‑TTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAAtt                         <  2:1292931/140‑1 (MQ=255)                                                                                                             gcAGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAAtt                         <  2:1039767/140‑1 (MQ=255)                                                                                                               aGTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAGCGGCACAAAGGGCGGAATAATTCa                       <  2:693048/140‑1 (MQ=255)                                                                                                                gTATTTTGTGATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCAc                      >  2:767179/1‑140 (MQ=255)                                                                                                                      tgtgATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCAt                >  2:590882/1‑140 (MQ=255)                                                                                                                         gATAATAGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCa             <  2:686933/140‑1 (MQ=255)                                                                                                                           taataGCGATTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAgg           >  1:612658/1‑140 (MQ=255)                                                                                                                             ataGCGATTAAAACCCCTATTTTTCAGTCGATTATGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAgggg         >  1:231260/1‑140 (MQ=255)                                                                                                                              taGCGATTAAAACCCCTATCTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGa        <  2:281302/140‑1 (MQ=255)                                                                                                                                   aTTAAAGCCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATg   <  2:231260/140‑1 (MQ=255)                                                                                                                                   aTTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATg   >  1:512859/1‑140 (MQ=255)                                                                                                                                   aTTAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATg   <  2:647140/140‑1 (MQ=255)                                                                                                                                    ttAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATGc  >  2:309147/1‑140 (MQ=255)                                                                                                                                    ttAAAACCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATGc  >  2:11337/1‑140 (MQ=255)                                                                                                                                          |                                                                                                                                      AAAAATCCCCATTCGTGATGTTGTGTTGCTTTGTTTTTATGTGTTAACAAATCAGACTGTTCTTTTTTTATACTGCACTGTTTTTGCCTGTCTGATTAAGGGGTTAGCGCAGTATTTTGTGATAATAGCGATTAAAATCCCTATTTTTCAGTCGATTAAGAACAGATAATATTCTGAATTTATTGATAGATAAACAGAAAAAAGTGCCTTTGTCAGCATAAAATAACGGCACAAAGGGCGGAATAATTCACTATCATTCAGGGGATTATGC  >  NC_000913/3597565‑3597835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑