BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,506,188	G→T	R6L (CGC→CTC)	sutR →	DNA‑binding transcriptional dual regulator SutR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,506,188	0	G	T	100.0%	491.3 / NA	135	R6L (CGC→CTC)	sutR	DNA‑binding transcriptional dual regulator SutR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (80/55); total (80/55)

Only 100 of 142 total aligned reads displayed.

TGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACA  >  NC_000913/1506053‑1506324

tgggtggAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCttt                                                                                                                                      <  1:720193/140‑1 (MQ=255)

  ggtggAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCttttt                                                                                                                                    >  1:738133/1‑140 (MQ=255)

      gaggaATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATcc                                                                                                                                >  2:1094159/1‑140 (MQ=255)

      gaggaATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATcc                                                                                                                                >  1:389362/1‑140 (MQ=255)

       aggaATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATcca                                                                                                                               >  1:194577/1‑140 (MQ=255)

           aTAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCcaccac                                                                                                                           <  1:198840/140‑1 (MQ=255)

            tAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCcaccac                                                                                                                           >  2:1480114/1‑139 (MQ=255)

             aGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCacac                                                                                                                         <  1:945508/140‑1 (MQ=255)

             aGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCacac                                                                                                                         >  1:1385433/1‑140 (MQ=255)

             aGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCacac                                                                                                                         >  1:1453449/1‑140 (MQ=255)

                 aaCAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGTGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTaa                                                                                                                     >  1:1580934/1‑140 (MQ=255)

                 aaCAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTaa                                                                                                                     >  1:1659674/1‑140 (MQ=255)

                 aaCAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTaa                                                                                                                     >  1:1070902/1‑140 (MQ=255)

                  aCAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTAT‑CACCACACTTAaac                                                                                                                   <  1:790194/140‑1 (MQ=255)

                  aCAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCG‑TTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAaac                                                                                                                   <  1:360540/140‑1 (MQ=255)

                   cAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATccacc                                                                                                                             >  2:1542562/1‑130 (MQ=255)

                   cAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATccacc                                                                                                                             <  1:1542562/130‑1 (MQ=255)

                    aGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAaaca                                                                                                                  >  2:1740977/1‑140 (MQ=255)

                      aCGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAaacaac                                                                                                                <  2:1070902/140‑1 (MQ=255)

                      aCGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAaacaac                                                                                                                >  1:55147/1‑140 (MQ=255)

                         cATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTAc                                                                                                             >  1:1636629/1‑140 (MQ=255)

                         cATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTAc                                                                                                             >  1:1463308/1‑140 (MQ=255)

                                aCCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCcagca                                                                                                      >  2:1307520/1‑140 (MQ=255)

                                  cTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCagcagc                                                                                                    >  2:712187/1‑140 (MQ=255)

                                   tCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGTGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAgcg                                                                                                   <  2:1580934/140‑1 (MQ=255)

                                      tGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAgcgc                                                                                                  <  2:164486/138‑1 (MQ=255)

                                      tGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAgcg                                                                                                   <  2:720019/137‑1 (MQ=255)

                                      tGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCgg                                                                                                >  1:691761/1‑140 (MQ=255)

                                      tGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCgg                                                                                                <  1:711908/140‑1 (MQ=255)

                                      tGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCgg                                                                                                >  2:1629505/1‑140 (MQ=255)

                                      tGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTCTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTACACATCTACGCCAGCAGCGCgg                                                                                                >  2:1817287/1‑140 (MQ=255)

                                        cGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCt                                                                                              >  2:1304680/1‑140 (MQ=255)

                                                cGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCtt                                                                                      >  2:590892/1‑140 (MQ=255)

                                                  tACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCcagcag                                                                                                     <  2:108167/123‑1 (MQ=255)

                                                  tACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCcagcag                                                                                                     >  1:108167/1‑123 (MQ=255)

                                                  tACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTc                                                                                    >  1:1110194/1‑140 (MQ=255)

                                                  tACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTc                                                                                    >  1:105382/1‑140 (MQ=255)

                                                    cAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTcgc                                                                                  >  1:913793/1‑140 (MQ=255)

                                                    cAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTcgc                                                                                  >  1:867059/1‑140 (MQ=255)

                                                     aGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTcgcg                                                                                 >  2:1644989/1‑140 (MQ=255)

                                                      ggCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGa                                                                                <  1:1476212/140‑1 (MQ=255)

                                                      ggCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGa                                                                                <  2:867059/140‑1 (MQ=255)

                                                       gCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAATTCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGACTTTCGCGAc                                                                               >  2:446611/1‑140 (MQ=255)

                                                       gCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGAc                                                                               >  1:1035821/1‑140 (MQ=255)

                                                          ccGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTgg                                                                            >  1:100116/1‑140 (MQ=255)

                                                            gTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCa                                                                          <  1:1583595/140‑1 (MQ=255)

                                                              aGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGa                                                                        <  1:1307520/140‑1 (MQ=255)

                                                                 aTTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGa                                                                        >  1:980644/1‑137 (MQ=255)

                                                                 aTTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGc                                                                     >  1:738105/1‑140 (MQ=255)

                                                                     gTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACg                                                                 >  2:935974/1‑140 (MQ=255)

                                                                     gTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACg                                                                 >  1:1511500/1‑140 (MQ=255)

                                                                     gTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACg                                                                 >  2:264019/1‑140 (MQ=255)

                                                                        cGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGc                                                              <  1:1740977/140‑1 (MQ=255)

                                                                        cGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGc                                                              <  1:1800446/140‑1 (MQ=255)

                                                                          ttATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGt                                                            >  1:4309/1‑140 (MQ=255)

                                                                               aCGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTa                                                       >  2:608418/1‑140 (MQ=255)

                                                                                cGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTaa                                                      >  2:178161/1‑140 (MQ=255)

                                                                                cGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTaa                                                      <  2:913793/140‑1 (MQ=255)

                                                                                  cacaAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAg                                                    <  1:590892/140‑1 (MQ=255)

                                                                                  cacaAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAg                                                    <  2:868877/140‑1 (MQ=255)

                                                                                   acaAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGc                                                   <  2:1056943/140‑1 (MQ=255)

                                                                                   acaAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGc                                                   >  1:1248511/1‑140 (MQ=255)

                                                                                   acaAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGc                                                   <  1:550111/140‑1 (MQ=255)

                                                                                    caAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCa                                                  >  2:209723/1‑140 (MQ=255)

                                                                                     aaGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCt                                                        >  1:635754/1‑133 (MQ=255)

                                                                                       gTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACggg                                                               <  2:326322/124‑1 (MQ=255)

                                                                                        tGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGt                                              <  2:825613/140‑1 (MQ=255)

                                                                                         gATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGtt                                             <  1:1644989/140‑1 (MQ=255)

                                                                                          aTAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTa                                            >  2:253048/1‑140 (MQ=255)

                                                                                               cTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCa                                       >  2:1723344/1‑140 (MQ=255)

                                                                                               cTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCa                                       >  2:185434/1‑140 (MQ=255)

                                                                                                 tCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTaa                                                      >  2:1689388/1‑123 (MQ=255)

                                                                                                 tCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGa                                     >  2:1592407/1‑140 (MQ=255)

                                                                                                 tCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGa                                     >  1:1784761/1‑140 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAg                                                    >  2:1177317/1‑124 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGc                                                   >  1:1102830/1‑125 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGc                                                   <  2:1094830/125‑1 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGc                                                   >  1:1094830/1‑125 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAt                                    >  1:1196365/1‑140 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAt                                    >  2:477980/1‑140 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAt                                    >  1:384314/1‑140 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAt                                    >  1:310768/1‑140 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAt                                    >  2:1397152/1‑140 (MQ=255)

                                                                                                  ccGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAt                                    >  1:809673/1‑140 (MQ=255)

                                                                                                   cGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGAtt                                   <  2:4309/140‑1 (MQ=255)

                                                                                                   cGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCAACGGGCGTTTCTAAAGCAATGTTAGGGCAGAtt                                   >  1:428169/1‑140 (MQ=255)

                                                                                                       ttGCCGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGc                               >  1:1775593/1‑140 (MQ=255)

                                                                                                           cGGAGGAGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTaa                           <  2:809673/140‑1 (MQ=255)

                                                                                                            ggaggaGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAAt                          <  2:1035821/140‑1 (MQ=255)

                                                                                                            ggaggaGTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAAt                          <  1:712187/140‑1 (MQ=255)

                                                                                                                 agTCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGagtc                     <  1:178161/140‑1 (MQ=255)

                                                                                                                   tCGCATGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGAAATGTTAGGGCAGATTGAGCGTAATGagtcca                   >  2:321689/1‑140 (MQ=255)

                                                                                                                        tGGAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCg              >  2:813661/1‑140 (MQ=255)

                                                                                                                         ggAAAATCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGa             <  2:1776032/140‑1 (MQ=255)

                                                                                                                             aaTCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGt         <  1:842347/140‑1 (MQ=255)

                                                                                                                             aaTCTCGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGt         <  2:1453449/140‑1 (MQ=255)

                                                                                                                               tctcGCTCTCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTcg       <  2:1196365/140‑1 (MQ=255)

                                                                                                                                 tcgctctcTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTcgcg     <  1:935974/140‑1 (MQ=255)

                                                                                                                                 tcgctctcTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGAAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTcgcg     <  1:321689/140‑1 (MQ=255)

                                                                                                                                   gctctctTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGAc   >  2:1245368/1‑140 (MQ=255)

TGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGTGCGTTATAGCGTACAGGCACCGTAGCATTTGTCCGTTATAACGCACAAGTGATAAACTTCCGTTTTGCCGGAGGAGTCGCATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACA  >  NC_000913/1506053‑1506324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`