BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,012,629	C→A	V537V (GTG→GTT)	yqeB ←	XdhC‑CoxI family protein YqeB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,012,629	0	C	A	100.0%	367.1 / NA	104	V537V (GTG→GTT)	yqeB	XdhC‑CoxI family protein YqeB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (48/56); total (48/56)

Only 100 of 105 total aligned reads displayed.

CATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGATCGATATCACCA  >  NC_000913/3012495‑3012761

cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAActtc                                                                                                                                   >  2:869535/1‑140 (MQ=255)

 aTCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAActtct                                                                                                                                  >  2:693042/1‑140 (MQ=255)

      aaaTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGt                                                                                                                             <  2:198569/140‑1 (MQ=255)

        aTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCg                                                                                                                           <  2:620086/140‑1 (MQ=255)

        aTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAAAACTTCTTTTGTCg                                                                                                                           <  1:225772/140‑1 (MQ=255)

          tCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCt                                                                                                                         >  2:1512906/1‑140 (MQ=255)

              tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCa                                                                                                                     <  1:1512906/140‑1 (MQ=255)

              tAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCa                                                                                                                     <  2:1711558/140‑1 (MQ=255)

                gATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑Cg                                                                                                                  <  2:1279719/140‑1 (MQ=255)

                gATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑Cg                                                                                                                  <  2:1476400/140‑1 (MQ=255)

                  ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGcc                                                                                                                <  1:1490259/140‑1 (MQ=255)

                   tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGccc                                                                                                               >  2:1022924/1‑140 (MQ=255)

                   tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGccc                                                                                                               >  1:618567/1‑140 (MQ=255)

                   tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGccc                                                                                                               >  1:394498/1‑140 (MQ=255)

                   tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGccc                                                                                                               >  2:1244521/1‑140 (MQ=255)

                     cAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTg                                                                                                             >  2:644184/1‑140 (MQ=255)

                     cAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTg                                                                                                             <  2:768718/140‑1 (MQ=255)

                      aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGa                                                                                                            <  1:1320622/140‑1 (MQ=255)

                      aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGa                                                                                                            >  1:1002134/1‑140 (MQ=255)

                      aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGCCGCTTTCA‑CGCCCTGa                                                                                                            <  2:1152622/140‑1 (MQ=255)

                        tGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATg                                                                                                          >  1:1338516/1‑140 (MQ=255)

                        tGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATg                                                                                                          >  1:1377780/1‑140 (MQ=255)

                         gCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGc                                                                                                         <  2:1112870/140‑1 (MQ=255)

                          cACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCa                                                                                                        >  2:319418/1‑140 (MQ=255)

                           aCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCAt                                                                                                       <  1:693042/140‑1 (MQ=255)

                           aCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAATCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCAt                                                                                                       >  2:1137927/1‑140 (MQ=255)

                            cTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATc                                                                                                      <  2:1377780/140‑1 (MQ=255)

                            cTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATc                                                                                                      <  2:1346384/140‑1 (MQ=255)

                            cTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATc                                                                                                      <  1:1558807/140‑1 (MQ=255)

                            cTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATc                                                                                                      <  1:222191/140‑1 (MQ=255)

                             ttGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCa                                                                                                     >  1:1170774/1‑140 (MQ=255)

                             ttGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCa                                                                                                     <  1:1244521/140‑1 (MQ=255)

                               gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAAc                                                                                                   <  1:644184/140‑1 (MQ=255)

                               gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAAc                                                                                                   <  2:1338516/140‑1 (MQ=255)

                                    ccTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGcc                                                                                                                >  1:1234832/1‑122 (MQ=255)

                                    ccTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGcc                                                                                                                <  2:1234832/122‑1 (MQ=255)

                                       gATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACTTCATTaa                                                                                           >  1:1712914/1‑140 (MQ=255)

                                       gATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTaa                                                                                           <  1:997544/140‑1 (MQ=255)

                                       gATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTaa                                                                                           <  1:1108217/140‑1 (MQ=255)

                                       gATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTaa                                                                                           >  2:1447745/1‑140 (MQ=255)

                                       gATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTaa                                                                                           >  2:1615480/1‑140 (MQ=255)

                                        aTAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAAc                                                                                          >  1:205962/1‑140 (MQ=255)

                                        aTAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAAc                                                                                          >  1:667908/1‑140 (MQ=255)

                                                 gcgcATCAGGCAATTTGGCGTTTGTCATCAATCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAGCATCATTAACG‑CCTCAAGt                                                                                <  1:1137927/140‑1 (MQ=255)

                                                  cgcATCAGGCAATTTGGCGTTTGTCATCAGTCTCATGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTa                                                                               >  2:1144017/1‑140 (MQ=255)

                                                  cgcATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTa                                                                               >  1:636954/1‑140 (MQ=255)

                                                    cATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTAcg                                                                             <  1:1300086/140‑1 (MQ=255)

                                                       cAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTAcgccg                                                                          >  1:1624186/1‑140 (MQ=255)

                                                       cAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTAcgccg                                                                          >  1:1266766/1‑140 (MQ=255)

                                                         ggCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTATCG‑CCTCAAGTAcgccgcc                                                                        >  2:1042646/1‑140 (MQ=255)

                                                               ttGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAAt                                                                  <  1:1022924/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACTTCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  2:1712914/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTATCG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  1:1042646/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  1:869535/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  2:700704/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  1:335202/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  2:205962/140‑1 (MQ=255)

                                                                   cGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGcc                                                              <  1:1252326/140‑1 (MQ=255)

                                                                        gTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGc                                                         <  2:667908/140‑1 (MQ=255)

                                                                        gTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGc                                                         <  2:1266766/140‑1 (MQ=255)

                                                                        gTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGc                                                         >  1:345820/1‑140 (MQ=255)

                                                                              aGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATc                                                   <  1:1615480/140‑1 (MQ=255)

                                                                                 ctcAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGa                                                <  2:636954/140‑1 (MQ=255)

                                                                                   cAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGaaa                                              <  1:319418/140‑1 (MQ=255)

                                                                                    aGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAAc                                             >  2:875656/1‑140 (MQ=255)

                                                                                     ggCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACg                                            <  2:1204246/140‑1 (MQ=255)

                                                                                     ggCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACg                                            >  2:809178/1‑140 (MQ=255)

                                                                                     ggCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACg                                            <  2:290283/140‑1 (MQ=255)

                                                                                          ggtgggtAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGt                                       >  1:1120897/1‑140 (MQ=255)

                                                                                          ggtgggtAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGt                                       >  1:238063/1‑140 (MQ=255)

                                                                                                  aTACCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAg                               <  2:1170774/140‑1 (MQ=255)

                                                                                                    aCCATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCg                             >  1:1580423/1‑140 (MQ=255)

                                                                                                     ccATCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCgg                            <  1:1144017/140‑1 (MQ=255)

                                                                                                       aTCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAg                               <  2:589482/135‑1 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  1:1667934/1‑140 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  1:1821296/1‑140 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  2:1322792/1‑140 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  2:1276856/1‑140 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  1:1077435/1‑140 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  2:85089/1‑140 (MQ=255)

                                                                                                        tCCGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGttt                         >  2:313129/1‑140 (MQ=255)

                                                                                                         ccGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTc                        >  2:1563737/1‑140 (MQ=255)

                                                                                                         ccGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTc                        <  2:394498/140‑1 (MQ=255)

                                                                                                          cGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTca                       <  2:1077435/140‑1 (MQ=255)

                                                                                                          cGGCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTca                       <  1:85089/140‑1 (MQ=255)

                                                                                                            gCCATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcacc                     >  1:1811090/1‑140 (MQ=255)

                                                                                                             ccATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcacca                    <  2:345820/140‑1 (MQ=255)

                                                                                                              cATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcaccac                   <  1:1276856/140‑1 (MQ=255)

                                                                                                              cATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcaccac                   <  1:1563737/140‑1 (MQ=255)

                                                                                                              cATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcaccac                   <  1:1104199/140‑1 (MQ=255)

                                                                                                              cATTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcaccac                   <  1:313129/140‑1 (MQ=255)

                                                                                                               aTTTTCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACg                  <  2:1624186/140‑1 (MQ=255)

                                                                                                                 tttCTTTAAAGCCAC‑TCCAAAACCTCTTTTGTTGGCTTCACCGCCTTGAGGCATAAACACCA‑TAACGCCCTAAAGTACGCCGCGGCC‑ATCCCCCGGGGTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAgg               <  2:1093075/140‑1 (MQ=255)

                                                                                                                 tttCATTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAg                >  1:655193/1‑140 (MQ=255)

                                                                                                                     aTTTAAGCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGATc            >  2:559663/1‑140 (MQ=255)

                                                                                                                           gCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcaccac                   >  1:1182948/1‑127 (MQ=255)

                                                                                                                           gCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTcaccac                   <  2:1182948/127‑1 (MQ=255)

                                                                                                                           gCCACTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGATCGATATc      >  1:796401/1‑140 (MQ=255)

                                                                                                                              aCTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGATCGATATCAcc   <  2:618567/140‑1 (MQ=255)

                                                                                                                               cTTCCAGAACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGATCGATATCACCa  >  2:279107/1‑140 (MQ=255)

CATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCA‑CGCCCTGATGCATCAACATCATTAACG‑CCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGATCGATATCACCA  >  NC_000913/3012495‑3012761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`