BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,061,400	C→A	A79D (GCC→GAC)	yihM →	putative TIM barrel domain‑containing protein YihM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,061,400	0	C	A	100.0%	415.5 / NA	118	A79D (GCC→GAC)	yihM	putative TIM barrel domain‑containing protein YihM
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (62/56); total (62/56)

Only 100 of 119 total aligned reads displayed.

AGAGTGTTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGCCCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTGCGC  >  NC_000913/4061264‑4061536

agagTGTTGCCTGCTGATTTACTTAATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGAccg                                                                                                                                       <  1:487196/140‑1 (MQ=255)

    tgtTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGAccg                                                                                                                                       >  2:7332/1‑136 (MQ=255)

    tgtTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGAccg                                                                                                                                       <  1:7332/136‑1 (MQ=255)

    tgtTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGt                                                                                                                                   <  2:1417647/140‑1 (MQ=255)

       tGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTg                                                                                                                                <  1:365802/140‑1 (MQ=255)

        gCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGa                                                                                                                               >  2:56825/1‑140 (MQ=255)

         ccTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGaa                                                                                                                              >  2:896589/1‑140 (MQ=255)

         ccTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGaa                                                                                                                              >  1:437214/1‑140 (MQ=255)

         ccTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGaa                                                                                                                              <  2:367821/140‑1 (MQ=255)

           tgctgATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAAcc                                                                                                                            >  2:535456/1‑140 (MQ=255)

            gctgATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCTAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCt                                                                                                                           >  1:154786/1‑140 (MQ=255)

            gctgATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCt                                                                                                                           >  1:1456279/1‑140 (MQ=255)

             ctgATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCtt                                                                                                                          <  2:407337/140‑1 (MQ=255)

             ctgATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCtt                                                                                                                          <  2:887423/140‑1 (MQ=255)

              tgATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTg                                                                                                                         >  1:713146/1‑140 (MQ=255)

                 tttACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGata                                                                                                                      <  1:92269/140‑1 (MQ=255)

                  ttACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGatat                                                                                                                     <  1:216204/140‑1 (MQ=255)

                    aCTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTc                                                                                                                   <  2:233138/140‑1 (MQ=255)

                    aCTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTc                                                                                                                   <  1:1296268/140‑1 (MQ=255)

                    aCTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGACGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTc                                                                                                                   <  1:920600/140‑1 (MQ=255)

                         atatCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATAtt                                                                                                              <  1:739575/140‑1 (MQ=255)

                          tatCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTg                                                                                                             >  1:562408/1‑140 (MQ=255)

                          tatCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTg                                                                                                             >  2:724348/1‑140 (MQ=255)

                          tatCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTg                                                                                                             >  2:237123/1‑140 (MQ=255)

                             cGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGaaa                                                                                                          >  2:459636/1‑140 (MQ=255)

                               cAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTc                                                                                                                   >  2:278885/1‑129 (MQ=255)

                               cAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAAcc                                                                                                        >  1:1679615/1‑140 (MQ=255)

                               cAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAAcc                                                                                                        >  1:919490/1‑140 (MQ=255)

                               cAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAAcc                                                                                                        >  2:88098/1‑140 (MQ=255)

                                 aGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAg                                                                                                      <  1:1491142/140‑1 (MQ=255)

                                  gTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAgc                                                                                                     >  1:1121527/1‑140 (MQ=255)

                                    gAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAgcgc                                                                                                   <  1:912349/140‑1 (MQ=255)

                                    gAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAgcgc                                                                                                   <  2:743407/140‑1 (MQ=255)

                                      aaaTAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCt                                                                                                 <  1:376795/140‑1 (MQ=255)

                                              tACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAg                                                                                         >  2:1056029/1‑140 (MQ=255)

                                               aCGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAgg                                                                                        <  1:276822/140‑1 (MQ=255)

                                                 gTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCa                                                                                      >  1:1373280/1‑140 (MQ=255)

                                                  tGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGATCCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCAt                                                                                     <  2:236380/140‑1 (MQ=255)

                                                  tGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCAt                                                                                     <  2:650059/140‑1 (MQ=255)

                                                  tGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCAt                                                                                     <  2:17176/140‑1 (MQ=255)

                                                     cGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTa                                                                                  >  2:447369/1‑140 (MQ=255)

                                                       tCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTAtt                                                                                >  1:948210/1‑140 (MQ=255)

                                                                 tGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCg                                                                      >  1:343596/1‑140 (MQ=255)

                                                                     ctcGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGc                                                                  >  1:61658/1‑140 (MQ=255)

                                                                     ctcGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGc                                                                  >  1:1041196/1‑140 (MQ=255)

                                                                       cGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCa                                                                <  2:1456279/140‑1 (MQ=255)

                                                                       cGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCa                                                                <  2:154786/140‑1 (MQ=255)

                                                                        gATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCAt                                                               >  2:736130/1‑140 (MQ=255)

                                                                         aTGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATc                                                              <  2:1679615/140‑1 (MQ=255)

                                                                         aTGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATc                                                              <  1:535456/140‑1 (MQ=255)

                                                                             cGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGTCGTCGCCATCGCGt                                                          >  1:1203930/1‑140 (MQ=255)

                                                                             cGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGt                                                          >  1:424127/1‑140 (MQ=255)

                                                                                 cGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGaa                                                      <  2:120307/140‑1 (MQ=255)

                                                                                           ttGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCa                                            >  1:189278/1‑140 (MQ=255)

                                                                                           ttGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCa                                            <  2:189278/140‑1 (MQ=255)

                                                                                             ggTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATc                                          >  1:1529754/1‑140 (MQ=255)

                                                                                                aaTATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTc                                       <  1:1092783/140‑1 (MQ=255)

                                                                                                  tatGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCg                                     >  2:1749456/1‑140 (MQ=255)

                                                                                                   atGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGt                                    <  2:1373280/140‑1 (MQ=255)

                                                                                                    tGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTa                                   <  2:61658/140‑1 (MQ=255)

                                                                                                    tGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTa                                   <  1:1056029/140‑1 (MQ=255)

                                                                                                       aCGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGTAAACTGGGGCATCGTCCGTACGt                                >  1:156276/1‑140 (MQ=255)

                                                                                                       aCGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGt                                >  2:521106/1‑140 (MQ=255)

                                                                                                       aCGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGt                                >  2:786630/1‑140 (MQ=255)

                                                                                                       aCGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGt                                <  2:948210/140‑1 (MQ=255)

                                                                                                       aCGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGt                                >  1:1028873/1‑140 (MQ=255)

                                                                                                       aCGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGt                                >  2:1690218/1‑140 (MQ=255)

                                                                                                        cGATAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGtt                               >  1:492641/1‑140 (MQ=255)

                                                                                                         ggtAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGGACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGttt                              >  2:1418840/3‑140 (MQ=255)

                                                                                                           tAAAGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGttttt                            >  1:285036/1‑140 (MQ=255)

                                                                                                            aaaGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTa                           <  1:213096/140‑1 (MQ=255)

                                                                                                             aaGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTAt                          <  1:786630/140‑1 (MQ=255)

                                                                                                              aGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATc                         <  1:731414/140‑1 (MQ=255)

                                                                                                              aGAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATc                         <  1:777278/140‑1 (MQ=255)

                                                                                                               gAACTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATcc                        <  1:778183/140‑1 (MQ=255)

                                                                                                                aaCTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCa                       >  1:541412/1‑140 (MQ=255)

                                                                                                                aaCTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCa                       <  1:521106/140‑1 (MQ=255)

                                                                                                                aaCTCTCTGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCa                       <  2:343596/140‑1 (MQ=255)

                                                                                                                     tctGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTa                  >  2:703972/1‑140 (MQ=255)

                                                                                                                     tctGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTa                  >  2:425420/1‑140 (MQ=255)

                                                                                                                     tctGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTa                  >  2:657988/1‑140 (MQ=255)

                                                                                                                     tctGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTa                  >  1:302064/1‑140 (MQ=255)

                                                                                                                     tctGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTa                  >  2:1144653/1‑140 (MQ=255)

                                                                                                                     tctGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTa                  <  1:56825/140‑1 (MQ=255)

                                                                                                                       tGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATg                >  1:388029/1‑140 (MQ=255)

                                                                                                                       tGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATg                <  1:703972/140‑1 (MQ=255)

                                                                                                                       tGCCTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATg                >  2:528962/1‑140 (MQ=255)

                                                                                                                          cTTTGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAg             >  1:229495/1‑140 (MQ=255)

                                                                                                                            ttGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGt           >  1:723941/1‑140 (MQ=255)

                                                                                                                             tGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCAc                      >  2:1279778/1‑128 (MQ=255)

                                                                                                                             tGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCAc                      <  1:1304926/128‑1 (MQ=255)

                                                                                                                             tGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCAc                      <  1:1279778/128‑1 (MQ=255)

                                                                                                                             tGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCAc                      >  2:1304926/1‑128 (MQ=255)

                                                                                                                             tGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGt                    <  1:766946/130‑1 (MQ=255)

                                                                                                                             tGGGGATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGt                    >  2:766946/1‑130 (MQ=255)

                                                                                                                               gggATAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAAt        >  1:1006771/1‑140 (MQ=255)

                                                                                                                                   tAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTgc    >  2:249209/1‑140 (MQ=255)

                                                                                                                                   tAAAGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGACATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTgc    >  2:320093/1‑140 (MQ=255)

                                                                                                                                    aaaGACCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTgcg   <  2:464261/140‑1 (MQ=255)

                                                                                                                                     aaGACCGCCGTCTGATCCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCTGTCGCCATCGCGTTGAAAACTTGGGCATCGTTCGTACGTTTTTATCCACGTTATGAAGGTAATTTgcgc  <  2:106630/140‑1 (MQ=255)

AGAGTGTTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGCCCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTGCGC  >  NC_000913/4061264‑4061536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`