Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,401,914 A→G R473R (CGT→CGC)  csrD ← regulator of CsrB and CsrC decay

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,401,9140AG100.0% 406.9 / NA 105R473R (CGT→CGC) csrDregulator of CsrB and CsrC decay
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/65);  total (40/65)

Only 100 of 109 total aligned reads displayed.

TCTGCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAACGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTCGCG  >  NC_000913/3401777‑3402048
                                                                                                                                         |                                                                                                                                      
tctGCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCg                                                                                                                                      <  2:2143840/140‑1 (MQ=255)
  tGCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCa                                                                                                                                    >  2:1728446/1‑140 (MQ=255)
   gCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCaa                                                                                                                                   <  1:1054637/140‑1 (MQ=255)
   gCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCaa                                                                                                                                   <  1:1728446/140‑1 (MQ=255)
   gCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTCCCTCTGGCCAGTAGCGCaa                                                                                                                                   <  2:924105/140‑1 (MQ=255)
            ataatTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAAt                                                                                                                          >  1:1945051/1‑140 (MQ=255)
            ataatTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAAt                                                                                                                          >  2:1342105/1‑140 (MQ=255)
             taatTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATa                                                                                                                         <  2:848874/140‑1 (MQ=255)
              aatTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATaa                                                                                                                        >  1:1160888/1‑140 (MQ=255)
                  aTGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACg                                                                                                                    >  1:83764/1‑140 (MQ=255)
                   tGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACgg                                                                                                                   >  2:762675/1‑140 (MQ=255)
                   tGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACgg                                                                                                                   <  1:1976232/140‑1 (MQ=255)
                     cGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCt                                                                                                                 >  2:1080043/1‑140 (MQ=255)
                     cGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCt                                                                                                                 >  2:2139433/1‑140 (MQ=255)
                     cGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCt                                                                                                                 >  2:2080971/1‑140 (MQ=255)
                        tttCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGAt                                                                                                              >  2:1911097/1‑140 (MQ=255)
                         ttCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTgg                                                                                                                             >  2:826537/1‑124 (MQ=255)
                         ttCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTgg                                                                                                                             <  1:826537/124‑1 (MQ=255)
                             ttGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCa                                                                                                         <  2:1713476/140‑1 (MQ=255)
                             ttGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCa                                                                                                         <  2:3343/140‑1 (MQ=255)
                             ttGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCa                                                                                                         <  2:976594/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  1:547279/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  2:1160888/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  2:1884426/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  1:2139433/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  2:1014436/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  1:1159184/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  1:1257639/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  1:1003050/140‑1 (MQ=255)
                               gtgATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCGCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGa                                                                                                       <  2:94291/140‑1 (MQ=255)
                                tgATTTTGCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAACCGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGAc                                                                                                      <  2:612862/140‑1 (MQ=255)
                                     tttCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCa                                                                                                 <  2:296181/140‑1 (MQ=255)
                                     tttCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCa                                                                                                 <  1:308129/140‑1 (MQ=255)
                                       tCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATa                                                                                               <  2:1945051/140‑1 (MQ=255)
                                       tCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATa                                                                                               <  1:762675/140‑1 (MQ=255)
                                            ttGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCtt                                                                                          >  2:1206649/1‑140 (MQ=255)
                                             tGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTc                                                                                         >  2:567569/1‑140 (MQ=255)
                                               cATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCg                                                                                       >  1:931418/1‑140 (MQ=255)
                                                     cGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGc                                                                                 >  2:1468097/1‑140 (MQ=255)
                                                       tATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCa                                                                               <  2:764591/140‑1 (MQ=255)
                                                       tATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCa                                                                               <  1:1206649/140‑1 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:2049563/1‑140 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:996751/1‑140 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:1036390/1‑140 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:785881/1‑140 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:1806049/1‑140 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:540265/1‑140 (MQ=255)
                                                         tCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCaaa                                                                             >  2:31463/1‑140 (MQ=255)
                                                            cgcAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTg                                                                          >  2:1850543/1‑140 (MQ=255)
                                                              cAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCa                                                                        <  1:250682/140‑1 (MQ=255)
                                                               aGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCaa                                                                       <  2:329241/140‑1 (MQ=255)
                                                               aGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCaa                                                                       >  2:1242165/1‑140 (MQ=255)
                                                               aGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCaa                                                                       >  2:1546468/1‑140 (MQ=255)
                                                                gCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAg                                                                      <  2:1806496/140‑1 (MQ=255)
                                                                    aCGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCa                                                                  <  1:1036390/140‑1 (MQ=255)
                                                                    aCGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCa                                                                  <  1:295610/140‑1 (MQ=255)
                                                                     cGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCAt                                                                 <  1:1342105/140‑1 (MQ=255)
                                                                     cGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCAt                                                                 <  1:31463/140‑1 (MQ=255)
                                                                      gCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATc                                                                <  2:2138867/140‑1 (MQ=255)
                                                                          aaaaCGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCa                                                                  >  1:1433910/1‑134 (MQ=255)
                                                                          aaaaCGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCa                                                                  <  2:1433910/134‑1 (MQ=255)
                                                                           aaaCGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCat                                                           >  1:517723/1‑140 (MQ=255)
                                                                              cgcgGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCAtata                                                        <  1:1110252/140‑1 (MQ=255)
                                                                              cgcgGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCAtata                                                        <  2:2154858/140‑1 (MQ=255)
                                                                               gcgGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCa                                                                  <  2:1722717/129‑1 (MQ=255)
                                                                               gcgGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCa                                                                  >  1:1722717/1‑129 (MQ=255)
                                                                                cgGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATc                                                                <  1:1848725/130‑1 (MQ=255)
                                                                                   gCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTccg                                                   <  1:1546468/140‑1 (MQ=255)
                                                                                    cGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTccgc                                                  >  1:1415481/1‑140 (MQ=255)
                                                                                        tCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAg                                              <  2:931418/140‑1 (MQ=255)
                                                                                          aGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCt                                            <  1:567569/140‑1 (MQ=255)
                                                                                          aGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCt                                            <  1:1665240/140‑1 (MQ=255)
                                                                                          aGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCt                                            <  1:1850543/140‑1 (MQ=255)
                                                                                             gACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAACCTGCAAGACCATCGGCATATACTCCGCCGAGCTAAc                                         >  2:1856758/1‑140 (MQ=255)
                                                                                             gACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAAc                                         <  2:559911/140‑1 (MQ=255)
                                                                                             gACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAAc                                         <  1:649803/140‑1 (MQ=255)
                                                                                             gACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAAc                                         <  1:46035/140‑1 (MQ=255)
                                                                                              aCTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAAcc                                        <  1:1242165/140‑1 (MQ=255)
                                                                                               cTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACct                                       <  2:1686468/140‑1 (MQ=255)
                                                                                                  aaCGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCtt                                    >  1:1725968/1‑140 (MQ=255)
                                                                                                    cGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCa                                  <  2:493114/140‑1 (MQ=255)
                                                                                                    cGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCa                                  <  1:1448524/140‑1 (MQ=255)
                                                                                                     ggTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCAt                                 <  2:517723/140‑1 (MQ=255)
                                                                                                         aCCTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTAcc                             >  2:1750056/1‑140 (MQ=255)
                                                                                                           cTGAATCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCAt                           <  1:540265/140‑1 (MQ=255)
                                                                                                              aaTCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGa                        >  1:1149015/1‑140 (MQ=255)
                                                                                                              aaTCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGa                        >  1:377515/1‑140 (MQ=255)
                                                                                                               aTCGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGaa                       >  1:1095244/1‑140 (MQ=255)
                                                                                                                tCGCCAGA‑TTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGa                     <  1:1498059/140‑1 (MQ=255)
                                                                                                                 cGCCAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGa                     <  2:836187/140‑1 (MQ=255)
                                                                                                                   ccAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATg                   >  1:48938/1‑140 (MQ=255)
                                                                                                                    cAGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGc                  <  2:1243946/140‑1 (MQ=255)
                                                                                                                     aGATTTTCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCg                 <  1:2080971/140‑1 (MQ=255)
                                                                                                                           tCCTCTGGCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACAt           <  2:377515/140‑1 (MQ=255)
                                                                                                                                 ggCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGa                     <  1:997838/124‑1 (MQ=255)
                                                                                                                                 ggCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTc     >  1:1210074/1‑140 (MQ=255)
                                                                                                                                  gCCAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTcg    <  2:1149015/140‑1 (MQ=255)
                                                                                                                                   ccAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTcgc   <  1:630809/140‑1 (MQ=255)
                                                                                                                                   accgTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTcgc   <  1:1294449/137‑1 (MQ=255)
                                                                                                                                    cAGTAGCGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTcgcg  <  1:1911097/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
TCTGCAAGTTCAATAATTATGCGTTTTCGTTGTGATTTTTCACATTGCATTAACGTATCGCGCAGCCAACGCTGAAAACGCGGGCGAATCAGCGACTCAACGGTAACCTGAATCGCCAGATTTTCCTCTGGCCAGTAACGCAATAGTGGAATAAGACGGCTGATTTGCAGACGGTCATACTCTTCCGATAAGCCAAACTGCAAGACCATCGGCATATACTCCGCCGAGCTAACCTCTTCATTACCATCGAAGATGCGGCACATGAGTTCGCG  >  NC_000913/3401777‑3402048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑