Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,281,284	G→C	pseudogene (163/504 nt)	agaA →	putative truncated N‑acetylgalactosamine‑6‑phosphate deacetylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,281,284	0	G	C	100.0%	247.6 / NA	64	pseudogene (163/504 nt)	agaA	putative truncated N‑acetylgalactosamine‑6‑phosphate deacetylase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (27/37);  total (27/37)

TACATCACCGCGAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCGTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTACGCTGTCTGT  >  NC_000913/3281150‑3281417                                                                                                                                       |                                                                                                                                      tACATCACCGCGAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTg                                                                                                                                  >  2:599626/1‑140 (MQ=255)   cATCACCGCGAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGAt                                                                                                                                >  2:1381923/1‑140 (MQ=255)        ccGCGAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCg                                                                                                                           <  1:599626/140‑1 (MQ=255)         cgcgAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGa                                                                                                                          >  1:330837/1‑140 (MQ=255)         cgcgAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGa                                                                                                                          >  2:147676/1‑140 (MQ=255)           cgAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGAcg                                                                                                                        >  1:672811/1‑140 (MQ=255)              aCCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGa                                                                                                                     >  1:1227993/1‑140 (MQ=255)                  ggAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATgca                                                                                                                 <  2:1227993/140‑1 (MQ=255)                    aaTGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATgcagg                                                                                                               <  2:163300/140‑1 (MQ=255)                         ttGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCt                                                                                                          <  1:1368143/140‑1 (MQ=255)                          tGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTg                                                                                                         >  2:1343693/1‑140 (MQ=255)                          tGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTg                                                                                                         >  1:335783/1‑140 (MQ=255)                          tGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTg                                                                                                         >  1:589453/1‑140 (MQ=255)                          tGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTg                                                                                                         <  2:17548/140‑1 (MQ=255)                                  gATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGT‑TTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCgg                                                                                                >  2:592450/1‑140 (MQ=255)                                     tAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGAt                                                                                              <  1:907742/140‑1 (MQ=255)                                     tAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGAt                                                                                              <  1:1275000/140‑1 (MQ=255)                                      aaCGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATg                                                                                             <  1:1204162/140‑1 (MQ=255)                                       aCGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATgg                                                                                            <  2:331399/140‑1 (MQ=255)                                       aCGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATgg                                                                                            <  2:866438/140‑1 (MQ=255)                                       aCGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATgg                                                                                            <  1:1381923/140‑1 (MQ=255)                                        cGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGt                                                                                           <  1:1416461/140‑1 (MQ=255)                                        cGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGt                                                                                           <  2:335783/140‑1 (MQ=255)                                          gACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCg                                                                                         <  1:1343693/140‑1 (MQ=255)                                            cAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCt                                                                                       <  1:62714/140‑1 (MQ=255)                                            cAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCt                                                                                       <  2:589453/140‑1 (MQ=255)                                            cAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCt                                                                                       <  1:478367/140‑1 (MQ=255)                                              aGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCtat                                                                                     <  1:1024125/140‑1 (MQ=255)                                                 gcgcCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACg                                                                                  <  2:672811/140‑1 (MQ=255)                                                   gcCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGtt                                                                                <  2:330837/140‑1 (MQ=255)                                                    ccTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCt                                                                                       <  2:1460265/132‑1 (MQ=255)                                                    ccTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCt                                                                                       >  1:1460265/1‑132 (MQ=255)                                                     ctggctggAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTAt                                                                              >  2:417599/1‑140 (MQ=255)                                                      tggctggAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTAtg                                                                             <  1:147676/140‑1 (MQ=255)                                                                  aTAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACg                                                                                  <  2:3686/123‑1 (MQ=255)                                                                  aTAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACg                                                                                  >  1:3686/1‑123 (MQ=255)                                                                  aTAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTga                                                                       >  1:639271/1‑134 (MQ=255)                                                                  aTAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTga                                                                       <  2:639271/134‑1 (MQ=255)                                                                  aTAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGt                                                                 >  2:145208/1‑140 (MQ=255)                                                                   tAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATgtgg                                                                          >  2:533952/1‑130 (MQ=255)                                                                   tAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATgtgg                                                                          <  1:533952/130‑1 (MQ=255)                                                                      ccGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAg                                                             <  2:1023692/140‑1 (MQ=255)                                                                      ccGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAg                                                             <  2:1106251/140‑1 (MQ=255)                                                                      ccGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAg                                                             >  2:206058/1‑140 (MQ=255)                                                                        gATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGAt                                                           >  1:591594/1‑140 (MQ=255)                                                                         aTGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATg                                                          <  2:96262/140‑1 (MQ=255)                                                                          tGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGc                                                         >  2:981979/1‑140 (MQ=255)                                                                          tGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGc                                                         >  1:324540/1‑140 (MQ=255)                                                                          tGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGc                                                         >  1:777025/1‑140 (MQ=255)                                                                           ggTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCa                                                        >  2:1102178/1‑140 (MQ=255)                                                                           ggTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCa                                                        <  2:777025/140‑1 (MQ=255)                                                                                tcatGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTg                                                   <  2:591594/140‑1 (MQ=255)                                                                                  atGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGc                                                 <  1:52174/140‑1 (MQ=255)                                                                                           cggcggCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGt                                        <  2:165339/140‑1 (MQ=255)                                                                                           cggcggCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGt                                        >  1:165339/1‑140 (MQ=255)                                                                                                          tgtgTTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTggg                         <  1:981979/140‑1 (MQ=255)                                                                                                           gtgtTGTTGCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGc                        <  1:206058/140‑1 (MQ=255)                                                                                                               tgttgCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGc                    <  1:1280185/140‑1 (MQ=255)                                                                                                                gttgCTGTGCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCg                   >  2:551922/1‑140 (MQ=255)                                                                                                                      gtgCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGt             >  1:363950/1‑140 (MQ=255)                                                                                                                       tgCGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTa            >  2:1059668/1‑140 (MQ=255)                                                                                                                         cGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTACg          >  2:1075605/1‑140 (MQ=255)                                                                                                                         cGAAAGAGAGAATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTACg          <  2:324540/140‑1 (MQ=255)                                                                                                                                 agaATCCTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTACGctgtctgt  <  1:859396/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                      TACATCACCGCGAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCGTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTACGCTGTCTGT  >  NC_000913/3281150‑3281417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑