BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	564,770	C→G	noncoding (48/77 nt)	argU →	tRNA‑Arg

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	564,770	0	C	G	97.2%	530.1 / 4.4	142	noncoding (48/77 nt)	argU	tRNA‑Arg
Reads supporting (aligned to +/- strand): ref base C (2/2); new base G (69/69); total (71/71)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 144 total aligned reads displayed.

TCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTG  >  NC_000913/564634‑564906

 cACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCa                                                                                                                                      <  1:1022526/140‑1 (MQ=255)

      gTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGTGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGCCGCa                                                                                                                                      <  2:1273014/135‑1 (MQ=255)

      gTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGTGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGCCGCa                                                                                                                                      >  1:1273014/1‑135 (MQ=255)

      gTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTc                                                                                                                                 >  2:314519/1‑140 (MQ=255)

      gTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTc                                                                                                                                 >  2:186323/1‑140 (MQ=255)

      gTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTc                                                                                                                                 >  2:1562500/1‑140 (MQ=255)

      gTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTc                                                                                                                                 <  1:322477/140‑1 (MQ=255)

        tCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGa                                                                                                                               >  1:68660/1‑140 (MQ=255)

         cAGCAACCAGATCAAAAGCCATTGACTCAGTAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGaa                                                                                                                              >  2:314819/1‑140 (MQ=255)

            cAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATcc                                                                                                                           >  1:1128740/1‑140 (MQ=255)

            cAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATcc                                                                                                                           >  2:1254127/1‑140 (MQ=255)

              aCCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTg                                                                                                                         <  2:98505/140‑1 (MQ=255)

              aCCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTg                                                                                                                         >  1:1013333/1‑140 (MQ=255)

              aCCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTg                                                                                                                         >  2:1861497/1‑140 (MQ=255)

              aCCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTg                                                                                                                         >  1:1147835/1‑140 (MQ=255)

                 aGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAg                                                                                                                      >  1:1120754/1‑140 (MQ=255)

                 aGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAg                                                                                                                      >  2:1845348/1‑140 (MQ=255)

                   aTCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAggg                                                                                                                    <  1:1059234/140‑1 (MQ=255)

                   aTCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAggg                                                                                                                    <  1:960317/140‑1 (MQ=255)

                     cAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGgcg                                                                                                                  <  2:328877/140‑1 (MQ=255)

                      aaaaGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGgcgc                                                                                                                 <  2:1669525/140‑1 (MQ=255)

                      aaaaGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGgcgc                                                                                                                 >  1:591408/1‑140 (MQ=255)

                       aaaGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGgcgcg                                                                                                                >  1:1736872/1‑140 (MQ=255)

                        aaGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGgcgcgc                                                                                                               <  2:762003/140‑1 (MQ=255)

                        aaGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGgcgcgc                                                                                                               >  1:1582833/1‑140 (MQ=255)

                         aGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGcc                                                                                                              <  1:1645728/140‑1 (MQ=255)

                          gCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCa                                                                                                             >  1:733535/1‑140 (MQ=255)

                             aTTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTa                                                                                                          >  2:1769127/1‑140 (MQ=255)

                             aTTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTa                                                                                                          >  1:897228/1‑140 (MQ=255)

                             aTTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTa                                                                                                          >  1:969099/1‑140 (MQ=255)

                             aTTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTa                                                                                                          >  2:1183526/1‑140 (MQ=255)

                             aTTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTa                                                                                                          >  1:1037534/1‑140 (MQ=255)

                             aTTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTa                                                                                                          >  1:167810/1‑140 (MQ=255)

                                     aGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCaa                                                                                                  >  1:678010/1‑140 (MQ=255)

                                     aGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCaa                                                                                                  <  2:151119/140‑1 (MQ=255)

                                     aGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCaa                                                                                                  >  2:1728922/1‑140 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCaa                                                                                                  <  1:493848/130‑1 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCGATCAGTTACGc                                                                                        >  2:1702880/1‑140 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGc                                                                                        <  2:1448667/140‑1 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGc                                                                                        <  2:829472/140‑1 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGc                                                                                        <  1:1086647/140‑1 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGc                                                                                        <  1:1806620/140‑1 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGc                                                                                        <  1:1632009/140‑1 (MQ=255)

                                               gACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGc                                                                                        <  1:120609/140‑1 (MQ=255)

                                                aCCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGcc                                                                                       <  1:1254127/140‑1 (MQ=255)

                                                aCCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGcc                                                                                       >  1:13378/1‑140 (MQ=255)

                                                aCCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGcc                                                                                       <  1:22993/140‑1 (MQ=255)

                                                aCCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGcc                                                                                       >  1:893331/1‑140 (MQ=255)

                                                 ccGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCct                                                                                      <  1:528099/140‑1 (MQ=255)

                                                 ccGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCct                                                                                      <  1:1769127/140‑1 (MQ=255)

                                                 ccGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCct                                                                                      <  1:1562500/140‑1 (MQ=255)

                                                 ccGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCct                                                                                      <  2:595106/140‑1 (MQ=255)

                                                 ccGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCct                                                                                      >  1:1498649/1‑140 (MQ=255)

                                                 ccGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCct                                                                                      <  1:314519/140‑1 (MQ=255)

                                                       aaTTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTta                                                                                >  2:186737/1‑140 (MQ=255)

                                                            aCGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATAtcc                                                                           >  2:1832857/1‑140 (MQ=255)

                                                            aCGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATAtcc                                                                           >  2:1460228/1‑140 (MQ=255)

                                                             cgcgATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATAtcct                                                                          <  1:1817828/140‑1 (MQ=255)

                                                              gcgATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATAtcctc                                                                         >  2:291464/1‑140 (MQ=255)

                                                                gATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCa                                                                       <  2:897228/140‑1 (MQ=255)

                                                                   tACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATaa                                                                    >  1:1117008/1‑140 (MQ=255)

                                                                      acCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAAttt                                                                 <  1:1680092/140‑1 (MQ=255)

                                                                      acCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAAttt                                                                 <  1:186737/140‑1 (MQ=255)

                                                                        cGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCa                                                               <  2:471071/140‑1 (MQ=255)

                                                                        cGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCa                                                               <  1:1878158/140‑1 (MQ=255)

                                                                        cGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCa                                                               >  1:1590269/1‑140 (MQ=255)

                                                                          cATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCaga                                                             <  1:1175697/140‑1 (MQ=255)

                                                                           aTTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCagag                                                            <  1:327095/140‑1 (MQ=255)

                                                                           aTTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCagag                                                            <  1:596719/140‑1 (MQ=255)

                                                                           aTTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCagag                                                            <  2:591408/140‑1 (MQ=255)

                                                                               cGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTggg                                                        <  2:1395180/140‑1 (MQ=255)

                                                                               cGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTggg                                                        <  2:1157799/140‑1 (MQ=255)

                                                                                 gTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGAc                                                      <  2:580930/140‑1 (MQ=255)

                                                                                  tATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACa                                                     <  2:969099/140‑1 (MQ=255)

                                                                                    tCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTgg                                                         >  2:1550022/1‑134 (MQ=255)

                                                                                    tCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTgg                                                         <  1:1550022/134‑1 (MQ=255)

                                                                                         gcgcCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTgg                                              >  2:890250/1‑140 (MQ=255)

                                                                                            cccTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGAc                                                      >  2:1229644/1‑129 (MQ=255)

                                                                                            cccTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGAc                                                      <  1:1229644/129‑1 (MQ=255)

                                                                                            cccTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAc                                           >  1:1731588/1‑140 (MQ=255)

                                                                                            cccTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGAc                                           >  2:118729/1‑140 (MQ=255)

                                                                                                tAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTa                                       >  1:795094/1‑140 (MQ=255)

                                                                                                  gCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATc                                     <  1:890250/140‑1 (MQ=255)

                                                                                                  gCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATc                                     <  2:733535/140‑1 (MQ=255)

                                                                                                       gTTGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCaa                                >  2:73264/1‑140 (MQ=255)

                                                                                                         tGGATAGAGCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCaaaa                              <  1:416852/140‑1 (MQ=255)

                                                                                                                agCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATgtcgt                       >  1:1803166/1‑140 (MQ=255)

                                                                                                                agCAACGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATgtcgt                       >  1:392667/1‑140 (MQ=255)

                                                                                                                   aaCGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTa                    <  1:557905/140‑1 (MQ=255)

                                                                                                                     cGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTAtt                  >  2:1848370/1‑140 (MQ=255)

                                                                                                                     cGACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTAtt                  >  2:1244191/1‑140 (MQ=255)

                                                                                                                      gACCTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTAttt                 <  2:1147835/140‑1 (MQ=255)

                                                                                                                        ccTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTc               <  1:1467501/140‑1 (MQ=255)

                                                                                                                        ccTTCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTc               <  1:1848370/140‑1 (MQ=255)

                                                                                                                          ttCTAAGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCt             >  2:573442/1‑140 (MQ=255)

                                                                                                                               aGTCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCAt        >  2:1869975/1‑140 (MQ=255)

                                                                                                                                 tCGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGc      <  2:1582833/140‑1 (MQ=255)

                                                                                                                                  cGTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGct     <  2:1803166/140‑1 (MQ=255)

                                                                                                                                   gTGGGGCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGctc    <  1:1863485/140‑1 (MQ=255)

                                                                                                                                     ggggCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTg  <  2:795094/140‑1 (MQ=255)

TCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTAAGTCGTGGGCCGCAGGTTCGAATCCTGCAGGGCGCGCCATTACAATTCAATCAGTTACGCCTTCTTTATATCCTCCATAATTTCAGAGTGGGACATATTTGGGACATTATCACCAAAAATGTCGTCTATTTTCCTCGCATGCTCTG  >  NC_000913/564634‑564906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`