Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,884,489 C→A intergenic (+13/‑4) rpmH → / → rnpA 50S ribosomal subunit protein L34/RNase P protein component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,884,4890CA98.8% 294.1 / ‑3.0 83intergenic (+13/‑4)rpmH/rnpA50S ribosomal subunit protein L34/RNase P protein component
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base A (46/36);  total (46/37)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01

ACCGTCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCAT  >  NC_000913/3884353‑3884624
                                                                                                                                        |                                                                                                                                       
aCCGTCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGa                                                                                                                                      <  2:1247209/140‑1 (MQ=255)
   gTCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGACGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTg                                                                                                                                   >  2:1673681/1‑140 (MQ=255)
    tCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTgg                                                                                                                                  >  1:1738242/1‑140 (MQ=255)
      tGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGtt                                                                                                                                >  1:843634/1‑140 (MQ=255)
      tGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGtt                                                                                                                                >  1:1655731/1‑140 (MQ=255)
      tGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGATCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGtt                                                                                                                                >  1:1026034/1‑140 (MQ=255)
          cTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGc                                                                                                                            <  2:1252783/140‑1 (MQ=255)
          cTGAAGCGCAACCGTTCTCACGGCTTCCGTGATCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGc                                                                                                                            <  2:1026034/140‑1 (MQ=255)
             aaGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCg                                                                                                                         >  1:1429812/1‑140 (MQ=255)
             aaGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCg                                                                                                                         >  2:601463/1‑140 (MQ=255)
              aGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGc                                                                                                                        <  1:987470/140‑1 (MQ=255)
              aGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGACCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGc                                                                                                                        >  2:792518/1‑140 (MQ=255)
               gcgcAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCa                                                                                                                       >  1:510875/1‑140 (MQ=255)
                cgcAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCa                                                                                                                       <  2:704165/139‑1 (MQ=255)
                cgcAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCa                                                                                                                       >  1:704165/1‑139 (MQ=255)
                cgcAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCAt                                                                                                                      <  2:1496358/140‑1 (MQ=255)
                  cAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCAttt                                                                                                                    >  1:1503379/1‑140 (MQ=255)
                  cAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCAttt                                                                                                                    >  2:1647229/1‑140 (MQ=255)
                  cAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCAttt                                                                                                                    >  1:760425/1‑140 (MQ=255)
                  cAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCAttt                                                                                                                    >  2:1764871/1‑140 (MQ=255)
                  cAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGc                                                                                                                        <  1:1100924/135‑1 (MQ=255)
                  cAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGc                                                                                                                        >  2:1100924/1‑135 (MQ=255)
                      cGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCa                                                                                                                <  1:1076185/140‑1 (MQ=255)
                              cGGCTTCCTTGATCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTa                                                                                                        <  2:1088844/140‑1 (MQ=255)
                              cGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTa                                                                                                        <  1:601463/140‑1 (MQ=255)
                               ggCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCa                                                                                                                >  2:1281403/1‑131 (MQ=255)
                               ggCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCa                                                                                                                <  1:1281403/131‑1 (MQ=255)
                               ggCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCa                                                                                                                >  2:62670/1‑131 (MQ=255)
                               ggCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCa                                                                                                                <  1:62670/131‑1 (MQ=255)
                                gCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACg                                                                                                      >  1:1266863/1‑140 (MQ=255)
                                gCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACg                                                                                                      <  2:1655731/140‑1 (MQ=255)
                                 cTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACg                                                                                                      >  2:1690499/1‑139 (MQ=255)
                                 cTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACg                                                                                                      <  1:1690499/139‑1 (MQ=255)
                                 cTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGc                                                                                                     >  2:1054288/1‑140 (MQ=255)
                                      gTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGtt                                                                                                <  1:1228272/140‑1 (MQ=255)
                                      gTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGtt                                                                                                <  1:284527/140‑1 (MQ=255)
                                       tGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTa                                                                                               >  2:185969/1‑140 (MQ=255)
                                             tATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTccc                                                                                         <  2:551687/140‑1 (MQ=255)
                                              aTGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCa                                                                                        >  1:220332/1‑140 (MQ=255)
                                               tGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAg                                                                                       <  2:1266863/140‑1 (MQ=255)
                                                 gCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTc                                                                                     >  2:558212/1‑140 (MQ=255)
                                                    actaAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAAt                                                                                  <  2:658772/140‑1 (MQ=255)
                                                      taAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTc                                                                                >  2:1341702/1‑140 (MQ=255)
                                                      taAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTc                                                                                >  2:819981/1‑140 (MQ=255)
                                                      taAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTc                                                                                >  2:1629730/1‑140 (MQ=255)
                                                           aTGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACAtt                                                                           <  1:1647229/140‑1 (MQ=255)
                                                             ggTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCg                                                                         <  1:187599/140‑1 (MQ=255)
                                                              gtcgtcAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGt                                                                        >  1:945962/1‑140 (MQ=255)
                                                                    aGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCca                                                                  >  2:116433/1‑140 (MQ=255)
                                                                     ggTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCcag                                                                 <  2:843634/140‑1 (MQ=255)
                                                                       ttCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCcagca                                                               <  1:113128/140‑1 (MQ=255)
                                                                             cACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCcaca                                                         <  1:116433/140‑1 (MQ=255)
                                                                              aCGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACaa                                                        <  1:819981/140‑1 (MQ=255)
                                                                                gtcgtcgtGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACg                                                      >  2:282639/1‑140 (MQ=255)
                                                                                gtcgtcgtGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACg                                                      >  2:1169508/1‑140 (MQ=255)
                                                                                gtcgtcgtGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACg                                                      >  1:1639124/1‑140 (MQ=255)
                                                                                 tcgtcgtGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACgg                                                     >  2:1582059/1‑140 (MQ=255)
                                                                                           aaaGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCAcgc                                           <  2:220332/140‑1 (MQ=255)
                                                                                           aaaGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCAcgcc                                          <  1:1764871/140‑1 (MQ=255)
                                                                                            aaGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCAcgcc                                          <  2:1429812/140‑1 (MQ=255)
                                                                                             aGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCAcgccg                                         <  1:1629730/140‑1 (MQ=255)
                                                                                             aGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCAcgccg                                         <  2:1738242/140‑1 (MQ=255)
                                                                                                 cgcgCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCaaa                                     >  2:1372860/1‑140 (MQ=255)
                                                                                                   cgcTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAAtt                                   >  2:1749486/1‑140 (MQ=255)
                                                                                                    gcTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTa                                  <  1:185969/140‑1 (MQ=255)
                                                                                                         tCTGACCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTTGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCAtt                             >  1:833634/1‑140 (MQ=255)
                                                                                                             aCCGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCg                         >  1:381712/1‑140 (MQ=255)
                                                                                                              ccGTTTCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCgg                        <  1:1054288/140‑1 (MQ=255)
                                                                                                                  ttCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGgccgc                    >  1:329085/1‑140 (MQ=255)
                                                                                                                  ttCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGgccgc                    <  1:1749486/140‑1 (MQ=255)
                                                                                                                   tCTAAGTAATAAAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGgccgcc                   >  1:799594/1‑140 (MQ=255)
                                                                                                                            taaAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGc          >  1:1486041/1‑140 (MQ=255)
                                                                                                                            taaAGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGc          <  1:558212/140‑1 (MQ=255)
                                                                                                                               aGCTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTgg       >  2:1427255/1‑140 (MQ=255)
                                                                                                                                 cTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTgggg     <  2:510875/140‑1 (MQ=255)
                                                                                                                                 cTAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTgggg     <  1:282639/140‑1 (MQ=255)
                                                                                                                                  tAACCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGc    <  2:1503379/140‑1 (MQ=255)
                                                                                                                                   aaCCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCa   >  1:618851/1‑140 (MQ=255)
                                                                                                                                   aaCCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCa   >  2:703555/1‑140 (MQ=255)
                                                                                                                                   aaCCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCa   >  1:1018989/1‑140 (MQ=255)
                                                                                                                                    aCCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCAt  >  2:1641618/1‑140 (MQ=255)
                                                                                                                                    aCCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCAt  >  2:1142233/1‑140 (MQ=255)
                                                                                                                                    aCCCATGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCAATCTCGGCCGCCTGAATTCGCTGGGGCAt  >  2:210256/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                       
ACCGTCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAATAAAGCTAACCCCTGAGTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCAT  >  NC_000913/3884353‑3884624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: