| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 58 (1.040) | 44/278 | 0.2 | 92.1% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3766089 | 5 (0.090) | coding (3907/4134 nt) | rhsA | rhs element protein RhsA | |||||
Only 100 of 156 total aligned reads displayed.
CCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATT > NC_000913/3765951‑3766227 | tatatagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGa > 2:816251‑M2/137‑140 (MQ=255) atatagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGat < 1:321707‑M2/5‑1 (MQ=255) aaTTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGgga > 1:594579‑M2/1‑137 (MQ=255) ttCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaag < 2:175365‑M2/140‑6 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 1:780686‑M2/132‑140 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 1:739460‑M2/132‑140 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 2:703689‑M2/132‑140 (MQ=255) gtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAAc > 2:880885‑M2/131‑140 (MQ=255) gtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAAc < 1:310973‑M2/10‑1 (MQ=255) ccATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggt > 1:687181‑M2/1‑133 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgcctttttttcgccatttactTAGATATAAc > 2:104514‑M2/131‑140 (MQ=255) tcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACa > 2:318085‑M2/130‑140 (MQ=255) cgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACaa > 1:870328‑M2/129‑140 (MQ=255) tGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcg < 2:573551‑M2/140‑11 (MQ=255) taacagccatttttttcttcagaaggaatttttaaaccggtttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATg > 2:856422‑M2/127‑140 (MQ=255) aacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGa > 2:57761‑M2/126‑140 (MQ=255) acagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGAtata < 1:68029‑M2/8‑1 (MQ=255) acagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGAtata > 2:68029‑M2/125‑132 (MQ=255) acagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGAt < 2:190870‑M2/16‑1 (MQ=255) ccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCt > 1:181438‑M2/121‑140 (MQ=255) aaaGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagt < 2:784615‑M2/140‑18 (MQ=255) aGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtcc > 1:628985‑M2/1‑121 (MQ=255) tttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTtct < 1:934011‑M2/23‑1 (MQ=255) gCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccc > 2:182482‑M2/1‑120 (MQ=255) tttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCg < 2:360949‑M2/25‑1 (MQ=255) cTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctga < 1:80330‑M2/140‑24 (MQ=255) ttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTgg > 2:143329‑M2/113‑140 (MQ=255) cacaGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatat > 2:717716‑M2/1‑114 (MQ=255) cagcaAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCATAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagat < 1:31665‑M2/140‑32 (MQ=255) cagcaAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgag < 1:824339‑M2/138‑30 (MQ=255) agaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGt > 2:739165‑M2/107‑140 (MQ=255) aaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTg < 1:856228‑M2/36‑1 (MQ=255) aaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTg < 2:780686‑M2/36‑1 (MQ=255) caagcaGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcat < 1:753992‑M2/140‑35 (MQ=255) aggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGc < 1:703689‑M2/37‑1 (MQ=255) ggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCa < 1:359232‑M2/38‑1 (MQ=255) agcaGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccc < 2:702154‑M2/124‑21 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 2:248577‑M2/41‑1 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 1:586726‑M2/41‑1 (MQ=255) tttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGaca < 2:770692‑M2/42‑1 (MQ=255) tttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCATGGAAATGTTGCAGaca < 1:813005‑M2/42‑1 (MQ=255) aGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg > 1:11746‑M2/1‑101 (MQ=255) tttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAcaca < 2:739460‑M2/44‑1 (MQ=255) taaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAgg > 1:912804‑M2/95‑140 (MQ=255) taaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAgg < 1:65749‑M2/46‑1 (MQ=255) accggcttgttgcagaaattcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGAt < 2:870328‑M2/49‑1 (MQ=255) aaTGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgagcaagtccctgatatgagatcatgtttgtcatctg < 2:415892‑M2/140‑47 (MQ=255) aTGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 2:672804‑M2/1‑93 (MQ=255) tgcAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 1:280465‑M2/140‑52 (MQ=255) gCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:784615‑M2/1‑82 (MQ=255) gCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 2:753992‑M2/1‑82 (MQ=255) cagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCgtgt > 1:7130‑M2/80‑140 (MQ=255) cATTGACAAAATGGTGGAACGATACAGCATCATAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 2:31665‑M2/1‑81 (MQ=255) cATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:175365‑M2/1‑81 (MQ=255) gaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCa > 2:550142‑M2/78‑140 (MQ=255) ttGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 1:163268‑M2/136‑58 (MQ=255) ttGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 2:163268‑M2/1‑79 (MQ=255) tGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:505779‑M2/1‑78 (MQ=255) gACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 1:299148‑M2/140‑64 (MQ=255) atgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATg > 1:888053‑M2/75‑140 (MQ=255) gcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGAc > 2:512874‑M2/73‑140 (MQ=255) cctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACa < 2:499199‑M2/69‑1 (MQ=255) gacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATg > 2:770241‑M2/63‑140 (MQ=255) gacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATg > 2:930624‑M2/63‑140 (MQ=255) caaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc < 1:856422‑M2/80‑1 (MQ=255) caaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc < 1:438731‑M2/80‑1 (MQ=255) acaaatgtcgccattttcatcaaagcgcgtagcaatgttgcctttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc < 2:892838‑M2/80‑1 (MQ=255) acaaatgtcgccattttcatcaaagcgcgtagcaatgttgcctttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc < 1:104514‑M2/80‑1 (MQ=255) cgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCt < 1:926417‑M2/87‑1 (MQ=255) gccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTg > 1:648024‑M2/53‑140 (MQ=255) cacaAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 2:397124‑M2/140‑90 (MQ=255) caAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 2:140153‑M2/140‑92 (MQ=255) aaaGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 1:139645‑M2/1‑48 (MQ=255) aaTATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:694672‑M2/140‑97 (MQ=255) aaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGaa < 2:883651‑M2/100‑1 (MQ=255) ctctctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca > 1:62486‑M2/1‑35 (MQ=255) tttgccttttttttcgccatttattTAGAAATAACAATGATAGTTCCTCGTGAAAATGTTGCAGACACAGGAATACTTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGAGGGGAAAAAACCCGACAGAtg < 2:124069‑M2/115‑1 (MQ=255) tGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc < 2:378041‑M2/140‑117 (MQ=255) ccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAc > 2:343643‑M2/22‑140 (MQ=255) ccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGACGTAAc > 2:758608‑M2/22‑140 (MQ=255) cttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACg < 1:57761‑M2/120‑1 (MQ=255) ttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGt > 1:716244‑M2/20‑140 (MQ=255) ttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGt > 2:652782‑M2/20‑140 (MQ=255) ttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGt < 1:13691‑M2/121‑1 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 2:533041‑M2/140‑119 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta < 1:467948‑M2/133‑112 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagta > 2:467948‑M2/1‑22 (MQ=255) ataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 2:280465‑M2/1‑21 (MQ=255) taatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggattcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc < 2:588874‑M2/140‑121 (MQ=255) tttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTc < 1:424020‑M2/126‑1 (MQ=255) tCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga < 1:241207‑M2/140‑124 (MQ=255) ttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCa < 1:152754‑M2/127‑1 (MQ=255) gggACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca > 1:397124‑M2/1‑14 (MQ=255) cgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAgg < 2:912804‑M2/129‑1 (MQ=255) ccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGaa < 1:570865‑M2/131‑1 (MQ=255) gCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 1:639801‑M2/140‑134 (MQ=255) cATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag < 1:547260‑M2/140‑135 (MQ=255) tAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAattgat < 2:425909/140‑1 (MQ=255) aGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAattgat < 2:280177/139‑1 (MQ=255) aGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAAGGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAattgatt < 2:619606/140‑1 (MQ=255) | CCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATT > NC_000913/3765951‑3766227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |