Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,568,504	0	T	G	33.9%	84.9 / 15.7	62	T6P (ACC→CCC)	mdtM	multidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base T (11/28);  new base G (20/0);  total (34/28)
Fisher's exact test for biased strand distribution p-value = 3.14e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCA  >  NC_000913/4568371‑4568641                                                                                                                                       |                                                                                                                                           gCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTaaaaaa                                                                                                                                      >  1:713757/1‑140 (MQ=255)  ccAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTaaaaaaa                                                                                                                                     <  2:852728/140‑1 (MQ=255)       cTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTgg                                                                                                                                <  1:549995/140‑1 (MQ=255)         gACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGcc                                                                                                                              >  1:323041/1‑139 (MQ=255)           cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATa                                                                                                                            <  1:110014/140‑1 (MQ=255)           cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATa                                                                                                                            <  1:396396/140‑1 (MQ=255)            aTCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATaa                                                                                                                           <  2:547150/140‑1 (MQ=255)                gCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATaacaaa                                                                                                                       >  1:111138/1‑140 (MQ=255)                gCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAATGGCATaaaaaa                                                                                                                       >  2:706303/1‑140 (MQ=255)                   ttAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAacaaacaa                                                                                                                    <  1:706303/140‑1 (MQ=255)                               aCCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑gg                                                                                                       <  2:898553/140‑1 (MQ=255)                                  acaTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACAGGGGATAACAAACAAACCCTCTTCC‑Ggagg                                                                                                    >  2:902819/1‑139 (MQ=255)                                   caTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGCAAAAAAACGTGGCATAACAAACAACCCCATTTCC‑GGAGaa                                                                                                   >  1:832775/1‑140 (MQ=255)                                       aaTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAAAGTGGGATAAAAAAAAACTCCTTTTCC‑GGGGAAaccc                                                                                               >  1:872781/1‑140 (MQ=255)                                         tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAAAAAAAAATCCTTGTCC‑GGGGAACCCCaa                                                                                             >  2:734918/1‑140 (MQ=255)                                           aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAAAAGGGCATAACAAAAAACTCCTTTTCC‑GGAGAACCCCAACg                                                                                           >  2:162788/1‑140 (MQ=255)                                           aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGGAAAAAAACCGGCATAACAAAAAAATCCTTTTCC‑GGAGAACCCCAACg                                                                                           >  2:610421/1‑140 (MQ=255)                                           aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGGGGCATAACAAACAAATCCTTGTCC‑CGAGGAcccccaaa                                                                                           >  2:176160/1‑136 (MQ=255)                                             cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGGAAAAAAACACGG‑ACAACAAACAACACCTTGTCCGGGACAACCCCAAggg                                                                                          >  2:99993/1‑140 (MQ=255)                                             cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACggg                                                                                         >  1:719851/1‑140 (MQ=255)                                             cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAAAGTGGCATAACAAAAAACTCCCTGTCC‑GGAGAACCCCAACggg                                                                                         >  2:340083/1‑140 (MQ=255)                                             cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAAGGGCATAAAAAAAAACCCCCTGTCC‑GGAGGACCCCAACagg                                                                                         >  2:294324/1‑140 (MQ=255)                                             cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGAAAAAAAACGTGGCATAAAAAACAACCCCCTGTCC‑GGAGAACCCCAAAggg                                                                                         >  2:84403/1‑140 (MQ=255)                                              ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGGATAACAAACAAACCCTTGTCC‑GGGGAACCCCAACcggg                                                                                        >  1:684938/1‑140 (MQ=255)                                                aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACATGGCCTAAAAAAAAAAACCTTTTAT‑TGAGGAACCCAACggggga                                                                                      >  2:942419/1‑138 (MQ=255)                                                  gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGgaaa                                                                                    >  1:706391/1‑140 (MQ=255)                                                    tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACg                                                                                  <  2:719851/140‑1 (MQ=255)                                                      gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCCAAAAAAACAAAACCTTTTCC‑GGAGAACCCCCACGGGGAAAACCaa                                                                                >  1:442370/1‑140 (MQ=255)                                                      gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGAGGCATAACAAAAAAATCCCTTTCC‑GGGGAACCCCCACGGGGGAAAAGaa                                                                                >  2:689056/1‑140 (MQ=255)                                                      gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAATGGGATAAAAAACAAACCCTTTTCC‑GGGGAACCCCAACGGGGGAAACGaa                                                                                >  2:437619/1‑140 (MQ=255)                                                       aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAAAAAACAACTCCTTGTCC‑GGGGAACCCCAACGGGGGAAAAGaaa                                                                               >  2:1529/1‑140 (MQ=255)                                                            aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGTAAAAAAAGGGGCATTACAAACAACCCCTTGTCC‑GGAGAACCCCAACGGGGGAAAAGAAATTCaa                                                                          >  1:608688/1‑140 (MQ=255)                                                            aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAACAAAAAAATCCTTTTCC‑GGAGAACCCCCACGGGGAAAAAGAAAATCaa                                                                          >  2:16575/1‑140 (MQ=255)                                                             tCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGAGGCATAACAAAAAACTCCTTGTCC‑GGAGAACCCCAACGGGGGAAAAGAAAATCaaa                                                                         >  2:482408/1‑139 (MQ=255)                                                                gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATAcc                                                                      >  1:872107/1‑140 (MQ=255)                                                                gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAACGGGGATAACAAACAACACCCTGTCC‑GGGGAACCCCAAGGGGGGAAACGAAAATCAAAAcc                                                                      >  2:401214/1‑140 (MQ=255)                                                                      aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAACGTGGCATAAAAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAAATCAATACCCTCggg                                                                >  2:297056/1‑139 (MQ=255)                                                                       gATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTa                                                               <  1:482408/140‑1 (MQ=255)                                                                       gATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTa                                                               <  1:16575/140‑1 (MQ=255)                                                                        aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTaa                                                              <  1:99993/140‑1 (MQ=255)                                                                        aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGGGGCATAAAAAAAAAACCCCTGTCC‑GGAGAAACCCAACGGGGGAAAAGAAAATCAAAACCGTCGGGaa                                                              >  2:335875/1‑140 (MQ=255)                                                                         tACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAAt                                                             <  2:924510/140‑1 (MQ=255)                                                                             cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg                                                         <  1:385805/140‑1 (MQ=255)                                                                             cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg                                                         <  2:713757/140‑1 (MQ=255)                                                                                  aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg                                                    <  2:476327/140‑1 (MQ=255)                                                                                   aGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAAAGGGGCATAAAAAAAAACACCTTTTCC‑GGGGAACCCCAACCGGGGAAACGAAAATTAATACCGTCGGGAATGACGaaaagg                                                   >  2:559561/1‑137 (MQ=255)                                                                                   aGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGCAAAAAAAAAGGGCCTAACAAACAACTCCCTGGCC‑GGAGAAACCCAACCGGGAAAAAGAAAATTAATACCCACTGGAATGACGGAAAGc                                                   >  2:815339/1‑140 (MQ=255)                                                                                         aCAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTga                                             <  1:937828/140‑1 (MQ=255)                                                                                           aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                           <  2:523770/140‑1 (MQ=255)                                                                                               tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAAAGTGGCATAAAAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAAATCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAggg                                       >  1:488198/1‑140 (MQ=255)                                                                                                cAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGc                                      <  1:734918/140‑1 (MQ=255)                                                                                                  aCGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGTGGCATAACAAAAAACTCCTTGTCC‑GGAGAACCCCAACGGGGGAAAAGAAAATCAATACCGTCGGGAATGACGAAAGGCAGGGGAGAAGGGGaa                                    >  2:192671/1‑140 (MQ=255)                                                                                                  aCGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAAAAAGAGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCCACGGGGGAAAAGAAAATCAAAAACGTCGGGAATGACGAAAAGCAGGGGAGAAAGGGaa                                    >  2:343710/1‑140 (MQ=255)                                                                                                    gCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACg                                  <  1:689056/140‑1 (MQ=255)                                                                                                     ccATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga                                 <  1:181007/140‑1 (MQ=255)                                                                                                     ccATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga                                 <  2:1890/140‑1 (MQ=255)                                                                                                        tCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc                              <  1:401214/140‑1 (MQ=255)                                                                                                        tCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc                              <  1:340083/140‑1 (MQ=255)                                                                                                        tCGGGAAAAACAGCGTGGCGGCATGGC‑GGGGAAAAGAACGGGGCATAAAAAAAAAATCCTTGTCC‑GGGGAACCCCCACGGGGGAAAAGAAATTTAATACCCTCGGGAATGACGAAAAGCAGGGGAGAAGGGGAACgggaa                              >  2:820306/1‑139 (MQ=255)                                                                                                             aaaaaCAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa                         <  2:174032/140‑1 (MQ=255)                                                                                                                       tGGCGGCATGGC‑GGGTAAAAAAAAGCGGCATAACAAACAACCCCCTTTCC‑GGAGAAACCCCACGGGGGAAAAGAAAATCAAAACCGTCCGGAATGAAGAAAGGCAGGGGAGAAGGGGAAAGAGAATGCAAAAGTACTgga               >  2:426257/1‑138 (MQ=255)                                                                                                                                ggC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa      <  2:608688/140‑1 (MQ=255)                                                                                                                                ggC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa      <  2:872107/140‑1 (MQ=255)                                                                                                                                ggC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa      <  1:192671/140‑1 (MQ=255)                                                                                                                                  c‑GGGTAAAAAAACGTGGGATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATGCCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAt    <  2:911237/140‑1 (MQ=255)                                                                                                                                  c‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAt    <  2:38383/140‑1 (MQ=255)                                                                                                                                     ggTAAAACCACGTGGCATAATAAACACTTCCTTGTCC‑GGACAACCCCATCGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCa  <  1:636649/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                           GCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGC‑GGGTAAAAAAACGTGGCATAACAAACAACTCCTTGTCC‑GGAGAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCA  >  NC_000913/4568371‑4568641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑