| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,088,216 | IS5 (–) +4 bp | coding (40‑43/930 nt) | yeeY ← | putative DNA‑binding transcriptional regulator YeeY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 33 (0.860) | 24/274 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2088219 | 0 (0.000) | coding (40/930 nt) | yeeY | putative DNA‑binding transcriptional regulator YeeY | |||||
| * | ? | NC_000913 | 2088216 = | 0 (0.000) | 31 (0.790) | 26/278 | 0.4 | 100% | coding (43/930 nt) | yeeY | putative DNA‑binding transcriptional regulator YeeY |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
TGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2088353‑2088216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAA < NC_000913/2102943‑2102815 TGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGG < 1:269918/140‑1 TGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGC > 2:249896/1‑140 ATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAA > 2:230031/1‑140 ATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAA < 1:39953/140‑1 CGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGAT < 1:111634/140‑1 CGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGAT < 2:582443/140‑1 CGATCCGCTAGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGAT > 2:135243/1‑140 CGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAG > 2:505352/1‑140 CGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAG > 2:534723/1‑140 GCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGA < 2:183390/140‑1 GCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG > 1:279510/1‑140 TGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATC < 1:230031/140‑1 AAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGC > 2:249916/1‑140 ACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCA < 1:509869/140‑1 CACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA < 1:607117/140‑1 CATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTC < 1:135243/140‑1 TGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACT > 1:531961/1‑140 CAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTA < 1:249916/140‑1 AGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACC < 1:178239/140‑1 GGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC > 1:646128/1‑140 GCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGC > 1:61822/1‑140 TGTGTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGC < 1:534723/140‑1 GTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCC > 2:106371/1‑140 GTTGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCC > 2:354297/1‑140 TGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGT > 1:528845/1‑140 TGATGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGT > 1:260895/1‑140 TGATCCTCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAG > 2:65723/1‑140 TCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGA > 2:148404/1‑140 TCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAG > 1:581067/1‑125 TCGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAG < 2:581067/125‑1 CGATGCCTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAA < 2:260895/140‑1 TGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAAACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2088353‑2088216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAA < NC_000913/2102943‑2102815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |