Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,125	0	T	A	23.7%	129.3 / 16.2	59	intergenic (‑330/+60)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (40/5);  new base A (0/14);  total (40/19)
Fisher's exact test for biased strand distribution p-value = 8.74e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACC  >  NC_000913/752986‑753262                                                                                                                                             |                                                                                                                                          gggTTATAAATGGGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCatat                                                                                                                                           <  2:374640/140‑1 (MQ=255) gggTTATAAATGCGACTACCATGAATTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCatat                                                                                                                                           <  2:715434/140‑1 (MQ=255) gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCatat                                                                                                                                           <  1:597024/140‑1 (MQ=255)  ggTTATAAATGCGACTACCATGAAGTTTTCAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCAtata                                                                                                                                          >  2:1047096/1‑140 (MQ=255)   gTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATaa                                                                                                                                         >  1:937993/1‑140 (MQ=255)      ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTATAATTTTTTG‑TGTTTAGGCATATaaaaa                                                                                                                                      >  1:880997/1‑140 (MQ=255)      ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATaaaaa                                                                                                                                      >  1:901933/1‑140 (MQ=255)          aTGCGACTACCATGATTTTTTTAATTAAAAGTATTGGGTTGCTGATAATTTGAGCTTTTTTATTTTTTTAAAATTTCTATATGTGTTTGTTAATGATTTTTTTTTTTAAATTTTTTTG‑TTTTTAGGCATAAAAAAATCaa                                                                                                                                  <  2:932832/140‑1 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  2:1164782/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  1:237651/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  1:119904/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  1:934896/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  1:370264/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  1:1081153/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAcc                                                                                                                                >  2:521223/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAccc                                                                                                                               >  2:398851/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAccc                                                                                                                               >  2:1001579/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAAccc                                                                                                                               >  2:213915/1‑140 (MQ=255)              gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCg                                                                                                                              >  1:250817/1‑140 (MQ=255)                         tttttttAATTGAAAGTTTTGGGTTGCTGATATTTTGAGTTGTTCTTTTCTTTTAAAATATCTATATGGTTTTTTTAATGTATTTTTTTTTTAAAATTTTTTG‑TTTTTTGGCATATAAAAATCAACCCGCCATATGAAcg                                                                                                                   <  2:234225/138‑1 (MQ=255)                           tttttAATTGAAATTATTGGTTTGCTAATATTTTGAGTTTTTTTTTTTTTTTTAAATATCTATATAGGTTTTTTAATGGTTTTTTTTTTTAAATTTTTTTG‑TTTTTAGCAATAAAAAAATCAACCCGCCATATGAAcggc                                                                                                                 <  2:250817/140‑1 (MQ=255)                             tttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAAcggcgg                                                                                                               >  2:328677/1‑140 (MQ=255)                             tttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTA‑TTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCggg                                                                                                              >  1:876469/1‑140 (MQ=255)                                   ggAAATTATGGGGTTTCTAAAAATTGGAGCTTTTTTTTTTTTTTAAAATATTTATATGGTTCTGTTAATGTTTTTTTTTTTTAAATTTTTTTG‑TGTTTAGTCATATAAAAATCACCCCGCCATATGAACGGCGGGTTaaa                                                                                                         <  2:901933/139‑1 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAat                                                                                                       >  2:439922/1‑140 (MQ=255)                                                   cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                         >  1:901673/1‑140 (MQ=255)                                                   cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                         >  1:903280/1‑140 (MQ=255)                                                        aaTTTGAGCTTTTTTTTTTTTTTTAAATTTTTATATTGGTTTTTTAATGTTTTTTATTTTTATAATTTTTTG‑TGTTTGGGAAAATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCa                                                                                    <  2:186689/140‑1 (MQ=255)                                                         aTTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCaa                                                                                   >  1:186689/1‑140 (MQ=255)                                                             gAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATAGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACCAATTAGCAATCAACCAt                                                                               >  2:729151/1‑140 (MQ=255)                                                              agtttttcttttcttTTTAAATATCTATATAGGTCTTTTAATGGATTTTATTTTTAAATTTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCATCCAtt                                                                              <  1:93500/135‑1 (MQ=255)                                                              aGCTTTTCTATTTTTTTTAAATATCTATATAGTTCTTTTAATGAATTTTATTTTTAAATTTTTTTG‑TTTTTAGGCATAAAAAAATAACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAtt                                                                              <  2:636571/140‑1 (MQ=255)                                                               gtttttttATTTTTTTTAAATATCTATATAGGTTTGTTAATGGTTTTTATTTTTACATTTTTTTG‑TGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                             <  2:451135/133‑1 (MQ=255)                                                                cTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTaa                                                                            >  2:236468/1‑140 (MQ=255)                                                                   ttCTTTTTTTTTAAAATATCTATATAGGTCTTTTAATGGATTTTATTTTTAAATTTTTTTG‑TGTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGc                                                                         <  1:1037939/140‑1 (MQ=255)                                                                          ttttttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TTTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                                  <  1:672028/139‑1 (MQ=255)                                                                          tttttaAAATATTTATATAGGTTTTTTAATGGTTTTTTTTTTTACATTTTTTTG‑TTTTTAGGAATATAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                                  <  2:855157/139‑1 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGGACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                               >  1:354384/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                               >  2:481328/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                               >  2:603485/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGATATCGc                                                               >  2:209415/1‑140 (MQ=255)                                                                                  atatCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTa                                                          >  2:273381/1‑140 (MQ=255)                                                                                           taGGTTTGTTAATGGTTTTTTTTTTTACATTTTTTTG‑TTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                 <  2:635438/140‑1 (MQ=255)                                                                                             ggTCTGTTAATGATTTTTTTTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttt                                               <  1:474657/140‑1 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                              >  1:199404/1‑140 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                              >  2:59868/1‑140 (MQ=255)                                                                                                ttGTTAATGGTTTTTATTTTTACAATTTTTTG‑TTTTTAGCCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                            <  2:3293/139‑1 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                           >  2:842784/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                           >  1:507426/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                           >  1:595658/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAAACAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                           >  2:504651/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTAAAACTTAGCAAACAAACATTAAACCTTGATATCGCTTTTAAAGGCGCGgttttta                                           >  1:3293/1‑138 (MQ=255)                                                                                                  tttATTGGTTTTTATTTTTACAATTTTTTT‑TTTTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                          <  1:1047096/139‑1 (MQ=255)                                                                                                  tttAATGGTTTTTTTTTTTAAAATTTTTTG‑TGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAATGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                          <  2:108800/139‑1 (MQ=255)                                                                                                  tttAATGGTTTTTATTTTTACATTTTTTTT‑TTTTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                          <  2:1081153/139‑1 (MQ=255)                                                                                                  tttAATGGTTTTTATTTTTACATTTTTTTG‑TTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                          <  2:129137/139‑1 (MQ=255)                                                                                                  gTTAAGGGTTTTTATTTTTAGATTTTTTTT‑TGTTGAGGAAAATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                          <  1:1020092/140‑1 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                         >  1:752525/1‑140 (MQ=255)                                                                                                     attGGATTTTATTTTTATAATTTTTTG‑TTTTTAGGCTTATAAAAAACATCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                       <  1:1001579/138‑1 (MQ=255)                                                                                                     aaTGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                       <  1:842784/140‑1 (MQ=255)                                                                                                     aaTGGATTTTATTTTTAAATTTTTTTG‑TGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                       <  1:521223/140‑1 (MQ=255)                                                                                                        ggATTTTATTTTTACAATTTTTTG‑TGTTTGGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                    >  2:176829/1‑140 (MQ=255)                                                                                                        ggATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                    >  2:514625/1‑140 (MQ=255)                                                                                                             ttattttTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                               >  1:758458/1‑140 (MQ=255)                                                                                                             ttattttTACAATTTTTTG‑TGTTTAGGCATATAAAAATAAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                               >  1:691618/1‑140 (MQ=255)                                                                                                               ttttttACATTTTTTTG‑TTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAg                             <  1:328677/139‑1 (MQ=255)                                                                                                                   ttACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGa                         >  2:146390/1‑140 (MQ=255)                                                                                                                       atttttttG‑TTTTTAGGAAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                     <  2:934896/138‑1 (MQ=255)                                                                                                                        aTTTTTTGCTTTTTAAACATATAAAAGCCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg                     <  2:119904/140‑1 (MQ=255)                                                                                                                             ttG‑TTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACggg               <  1:89561/140‑1 (MQ=255)                                                                                                                              tg‑ttTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc              <  1:213915/140‑1 (MQ=255)                                                                                                                              tg‑ttTTTAGGAACAAAAAATCCAAGCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc              <  2:880997/140‑1 (MQ=255)                                                                                                                              tg‑ttTTTAGAAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc              <  2:901673/140‑1 (MQ=255)                                                                                                                              tg‑tgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc              <  1:273381/140‑1 (MQ=255)                                                                                                                               g‑tgtTTAGAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa             <  2:199404/140‑1 (MQ=255)                                                                                                                                ttttttAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa             <  1:603485/137‑1 (MQ=255)                                                                                                                                ttttttAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa             <  1:1164782/137‑1 (MQ=255)                                                                                                                                 tttttAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCaa            <  2:727197/138‑1 (MQ=255)                                                                                                                                 tgtTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCaa            <  1:439922/140‑1 (MQ=255)                                                                                                                                     tAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt        <  1:414563/140‑1 (MQ=255)                                                                                                                                     tAGACATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt        <  2:329206/140‑1 (MQ=255)                                                                                                                                           tataAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTTATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc  >  2:55223/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                          GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTG‑TGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACC  >  NC_000913/752986‑753262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑