Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,997,895	G→T	pseudogene (94/300 nt)	ygeP ←	protein YgeP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,997,895	0	G	T	100.0%	280.4 / NA	77	pseudogene (94/300 nt)	ygeP	protein YgeP
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (51/26);  total (51/26)

CATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCAGTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTCCCA  >  NC_000913/2997760‑2998030                                                                                                                                        |                                                                                                                                        cATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCa                                                                                                                                     >  2:910501/1‑140 (MQ=255)   tCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCAtt                                                                                                                                   <  1:813127/140‑1 (MQ=255)        ttCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACtt                                                                                                                              >  1:262431/1‑140 (MQ=255)                    tttATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCgta                                                                                                                  >  1:574652/1‑140 (MQ=255)                       aTCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCgtagta                                                                                                               >  1:476441/1‑140 (MQ=255)                         cTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTaaa                                                                                                             >  2:87426/1‑140 (MQ=255)                         cTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTaaa                                                                                                             >  2:534862/1‑140 (MQ=255)                          tttttCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAAt                                                                                                            <  1:808624/140‑1 (MQ=255)                             ttCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCag                                                                                                         >  1:393481/1‑140 (MQ=255)                              tCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCaga                                                                                                        <  2:221724/140‑1 (MQ=255)                                                tctcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtcttt                                                                                      >  1:787003/1‑140 (MQ=255)                                                 ctcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtctttc                                                                                     >  2:325914/1‑140 (MQ=255)                                                 ctcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtctttc                                                                                     >  1:485350/1‑140 (MQ=255)                                                 ctcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtctttc                                                                                     >  1:530263/1‑140 (MQ=255)                                                  tcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtctttct                                                                                    >  2:728628/1‑140 (MQ=255)                                                  tcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtctttct                                                                                    >  2:754615/1‑140 (MQ=255)                                                  tcCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGtctttct                                                                                    >  2:71486/1‑140 (MQ=255)                                                          aaTCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGt                                                                            >  2:451478/1‑140 (MQ=255)                                                                    tAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACa                                                                  >  2:307172/1‑140 (MQ=255)                                                                     aaCGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACaa                                                                 <  1:728628/140‑1 (MQ=255)                                                                        gTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACg                                                              <  1:451478/140‑1 (MQ=255)                                                                        gTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACg                                                              >  1:400015/1‑140 (MQ=255)                                                                          tATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGtt                                                            >  1:638444/1‑140 (MQ=255)                                                                           aTTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTtc                                                           <  2:400015/140‑1 (MQ=255)                                                                           aTTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTtc                                                           <  2:545397/140‑1 (MQ=255)                                                                           aTTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTtc                                                           <  1:307172/140‑1 (MQ=255)                                                                                          ttATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCAc                                            >  2:220048/1‑140 (MQ=255)                                                                                          ttATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCAc                                            <  1:534862/140‑1 (MQ=255)                                                                                          ttATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCAc                                            <  2:334970/140‑1 (MQ=255)                                                                                          ttATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCAc                                            <  1:87426/140‑1 (MQ=255)                                                                                           tATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCAcc                                           >  2:308441/1‑140 (MQ=255)                                                                                           tATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCAcc                                           >  2:534609/1‑140 (MQ=255)                                                                                                 tGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCa                                     >  2:360309/1‑140 (MQ=255)                                                                                                 tGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCa                                     >  1:133671/1‑140 (MQ=255)                                                                                                 tGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCa                                     >  2:924674/1‑140 (MQ=255)                                                                                                 tGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCa                                     >  1:765006/1‑140 (MQ=255)                                                                                                  gAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGt                                               <  1:618306/129‑1 (MQ=255)                                                                                                  gAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGt                                               >  2:618306/1‑129 (MQ=255)                                                                                                  gAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCaa                                    >  2:361682/1‑140 (MQ=255)                                                                                                  gAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCaa                                    >  1:914652/1‑140 (MQ=255)                                                                                                  gAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCaa                                    >  2:298172/1‑140 (MQ=255)                                                                                                  gAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCaa                                    >  1:205032/1‑140 (MQ=255)                                                                                                      tggtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGa                                <  2:133671/140‑1 (MQ=255)                                                                                                      tggtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGa                                <  2:765006/140‑1 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGGGTAGTAAATCAGAGCCAAAAACAGAGCCTTTCTTCGAGAGAAGGTTTGACAAACGTTCCAGTCCAGAGGCCACCATTCCACCGAAAg                              >  2:385763/1‑140 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGc                                      <  2:858396/132‑1 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGc                                      >  1:858396/1‑132 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              >  2:731981/1‑140 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              >  2:673944/1‑140 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              >  2:514303/1‑140 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              <  2:787003/140‑1 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              <  1:298172/140‑1 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              >  1:443203/1‑140 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              >  1:482818/1‑140 (MQ=255)                                                                                                        gtTCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAg                              >  1:568486/1‑140 (MQ=255)                                                                                                         ttCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGa                             >  2:37110/1‑140 (MQ=255)                                                                                                         ttCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGa                             >  2:25715/1‑140 (MQ=255)                                                                                                         ttCAACCTCGTTGTTGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGa                             >  1:276251/1‑140 (MQ=255)                                                                                                                  gttgttGAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTaa                    >  1:779880/1‑140 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGa                             >  1:146606/1‑130 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGa                             <  2:146606/130‑1 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAAt                   <  2:848389/140‑1 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAAt                   <  1:283002/140‑1 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAAt                   >  2:654470/1‑140 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAAt                   <  1:910501/140‑1 (MQ=255)                                                                                                                   ttgttgAAAGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAAt                   >  2:135596/1‑140 (MQ=255)                                                                                                                         aaaGAGTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCa             >  1:89532/1‑140 (MQ=255)                                                                                                                            gagTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCAtct          >  1:571264/1‑140 (MQ=255)                                                                                                                             agTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCAtctt         >  2:592537/1‑140 (MQ=255)                                                                                                                             agTTTCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCAtctt         >  2:458987/1‑140 (MQ=255)                                                                                                                                ttCATCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATcttctt      >  2:443395/1‑140 (MQ=255)                                                                                                                                   aTCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTccc   <  1:135596/140‑1 (MQ=255)                                                                                                                                   aTCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTccc   <  2:485350/140‑1 (MQ=255)                                                                                                                                    tCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTCTCa  <  2:779880/140‑1 (MQ=255)                                                                                                                                    tCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTCCCa  >  2:688176/1‑140 (MQ=255)                                                                                                                                    tCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTCCCa  <  2:206897/140‑1 (MQ=255)                                                                                                                                    tCCATTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTCCCa  <  2:104274/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        CATCGGCTTCTCTGTAATGTTTATCTTTTTCCAGATAACCTGGGGATTCTCCCCCTAAATCAAGCTGTAACGTTATTCTTTCATAACCTTTATCTATGAGGTGGTTCAACCTCGTTGTTGAAAGAGTTTCATCCAGTTCATTGACTTTAGCTTCGCGTAGTAAATCAGAGACAAAAACAGAGTCTTTCTTCGAGAGTAGGTTTGACAAACGTTCCAGTCCAGAGGTCACCAGTGCAACGGAAGATGTGTTTAATCGGGCATCTTCTTCCCA  >  NC_000913/2997760‑2998030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑