| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,806,203 | IS5 (+) +4 bp | coding (862‑865/1125 nt) | waaG ← | lipopolysaccharide glucosyltransferase I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 84 (0.990) | 52/276 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3806203 = | 0 (0.000) | coding (865/1125 nt) | waaG | lipopolysaccharide glucosyltransferase I | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 87 (1.030) | 54/276 | 0.3 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3806206 | 0 (0.000) | coding (862/1125 nt) | waaG | lipopolysaccharide glucosyltransferase I | |||||
Only 100 of 168 total aligned reads displayed.
TTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAAT > NC_000913/3806069‑3806345 | tttACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGgg > 1:805756‑M2/1‑138 (MQ=255)acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTagaa > 2:369312‑M2/135‑140 (MQ=255) ttACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATGCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGgga < 2:1253470‑M2/140‑4 (MQ=255) ttACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGgga > 2:1296211‑M2/1‑137 (MQ=255) cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTagaag > 1:787948‑M2/134‑140 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTagaaga > 2:857613‑M2/133‑140 (MQ=255) ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACg < 2:1110081‑M2/11‑1 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGa > 2:123561‑M2/129‑140 (MQ=255) aaaaCTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgc > 2:775644‑M2/1‑131 (MQ=255) ttCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaaca > 1:1117321‑M2/1‑126 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCcgcg < 1:294498‑M2/20‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCcgcg < 1:1094146‑M2/20‑1 (MQ=255) tttAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtc > 1:1405431‑M2/1‑122 (MQ=255) ttAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtcc > 2:225966‑M2/1‑121 (MQ=255) ttAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtcc > 2:1133810‑M2/1‑121 (MQ=255) ttAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtcc > 1:824593‑M2/1‑121 (MQ=255) aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTc < 2:787948‑M2/25‑1 (MQ=255) aaTTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtcc > 2:131615‑M2/1‑119 (MQ=255) ttGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctga < 1:1433479‑M2/140‑24 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTg > 2:343859‑M2/113‑140 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGa > 1:787739‑M2/112‑140 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGa < 2:1038323‑M2/29‑1 (MQ=255) ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCg > 1:456160‑M2/106‑140 (MQ=255) ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGa < 2:504823‑M2/38‑1 (MQ=255) ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGa < 2:405014‑M2/38‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCg > 2:823570‑M2/102‑136 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCg < 1:823570‑M2/35‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGAt > 2:1288606‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGAt > 2:43279‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGAt > 1:1315205‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGAt > 1:55066‑M2/102‑140 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGAt > 1:650116‑M2/102‑140 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATg < 1:343859‑M2/40‑1 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATg < 1:39668‑M2/40‑1 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATg < 2:196351‑M2/40‑1 (MQ=255) aaaGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgt < 2:1321728‑M2/140‑37 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGc < 1:167000‑M2/41‑1 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGc < 2:538238‑M2/41‑1 (MQ=255) aGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgttt > 2:1370234‑M2/1‑102 (MQ=255) ggTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg > 2:753729‑M2/1‑101 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAg > 1:227746‑M2/98‑140 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGt > 1:525211‑M2/97‑140 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGt > 2:483608‑M2/97‑140 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGtaa < 2:55066‑M2/46‑1 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGc < 1:1318394‑M2/41‑1 (MQ=255) gATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 1:1189784‑M2/1‑93 (MQ=255) gATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 1:277581‑M2/1‑93 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCa > 2:888253‑M2/88‑140 (MQ=255) tGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag > 1:1345295‑M2/1‑91 (MQ=255) ccGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca > 1:1321728‑M2/1‑88 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGc < 1:975152‑M2/58‑1 (MQ=255) ttCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag < 2:1167958‑M2/140‑56 (MQ=255) acaATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:435368‑M2/1‑81 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCAt > 2:1129097‑M2/77‑140 (MQ=255) ttGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 1:37349‑M2/140‑64 (MQ=255) ttGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 1:734676‑M2/140‑64 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAAt > 2:557468‑M2/73‑140 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTg > 1:1373310‑M2/69‑140 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGacac < 2:525211‑M2/76‑1 (MQ=255) cAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag < 1:1172395‑M2/140‑74 (MQ=255) tataATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca > 1:32585‑M2/1‑64 (MQ=255) tGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 1:566479‑M2/140‑82 (MQ=255) tGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 1:485276‑M2/140‑82 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGa > 2:446588‑M2/55‑140 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGAc < 1:857613‑M2/87‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCgg > 2:622799‑M2/51‑140 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCgg > 1:372416‑M2/51‑140 (MQ=255) gTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 2:1423321‑M2/1‑54 (MQ=255) gTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 1:1015135‑M2/140‑87 (MQ=255) gTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 2:775181‑M2/140‑87 (MQ=255) gTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 1:959029‑M2/140‑87 (MQ=255) gTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc < 2:335067‑M2/140‑87 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGgag < 2:356760‑M2/92‑1 (MQ=255) aCCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 2:1240354‑M2/1‑52 (MQ=255) aCCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:1124502‑M2/1‑44 (MQ=255) cGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 1:949266‑M2/140‑99 (MQ=255) cGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 2:612072‑M2/1‑42 (MQ=255) cTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga < 1:490483‑M2/140‑101 (MQ=255) ttAAAACAGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:1332342‑M2/1‑34 (MQ=255) aGGTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag < 2:235959‑M2/140‑114 (MQ=255) ggTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcagcttaccttcgccgacagtgaattcagcagtaagc < 1:1244723‑M2/140‑115 (MQ=255) gTAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg < 2:384022‑M2/140‑116 (MQ=255) tAACCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc < 2:16294‑M2/140‑117 (MQ=255) aCCCAGCAGTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 2:657274‑M2/140‑119 (MQ=255) cttattcgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGttt > 2:1413680‑M2/17‑140 (MQ=255) cagTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 2:191064‑M2/135‑120 (MQ=255) cagTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt > 1:191064‑M2/1‑16 (MQ=255) agTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc < 2:952419‑M2/140‑126 (MQ=255) agTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc > 1:235959‑M2/1‑15 (MQ=255) agTGATCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc < 1:1382572‑M2/140‑126 (MQ=255) cgcaccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGc > 1:877798‑M2/11‑140 (MQ=255) accttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAg < 1:1221700‑M2/133‑1 (MQ=255) aTCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa < 1:429638‑M2/140‑130 (MQ=255) aTCGCTTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa < 1:355864‑M2/140‑130 (MQ=255) ccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAgc < 1:1242406‑M2/134‑1 (MQ=255) ccttccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAgc > 1:686632‑M2/7‑140 (MQ=255) tccCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCt > 2:578700‑M2/4‑140 (MQ=255) tAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt < 2:26214‑M2/140‑138 (MQ=255) tAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCaa > 1:715117/1‑140 (MQ=255) gggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 2:655928‑M2/140‑140 (MQ=255) | TTTACGTAAAACTTCATTTAATTGTTCCTGAGAGAAAGGTTCAGCGATGACCGTTCCACAATTGGCATCCGCAATATAATGCGCGTACCCACATACCGCTGTTGTTAAAACAGGTAACCCAGCAGTGATCGCTTCTAGAAGAACGATACCCGCGGCTTCCTGATAAGCGGGATGCAGTAATAAATCAGCGGCTGCCATTAATTCTGACACATCATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAAT > NC_000913/3806069‑3806345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |