Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,399	C→A	R94S (CGC→AGC)	marR →	DNA‑binding transcriptional repressor MarR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,399	0	C	A	100.0%	280.4 / NA	80	R94S (CGC→AGC)	marR	DNA‑binding transcriptional repressor MarR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (39/41);  total (39/41)

TATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCT  >  NC_000913/1619263‑1619535                                                                                                                                         |                                                                                                                                         tATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGagcg                                                                                                                                       >  1:270216/1‑140 (MQ=255)   tCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAgcggc                                                                                                                                     >  1:664543/1‑140 (MQ=255)   tCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAgcggc                                                                                                                                     >  1:1268412/1‑140 (MQ=255)     cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGt                                                                                                                                   <  1:421069/140‑1 (MQ=255)     cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGt                                                                                                                                   <  1:894195/140‑1 (MQ=255)     cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCAGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAGGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGt                                                                                                                                   <  2:1455701/140‑1 (MQ=255)       cTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTAc                                                                                                                                 <  2:1377654/140‑1 (MQ=255)        tGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACt                                                                                                                                >  1:1284020/1‑140 (MQ=255)           gcggcgTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTa                                                                                                                            <  2:137336/140‑1 (MQ=255)             ggcgTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTaa                                                                                                                           >  1:378370/1‑140 (MQ=255)                 tgtATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACt                                                                                                                       >  2:1413206/1‑140 (MQ=255)                         tCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcg                                                                                                               >  2:1259626/1‑140 (MQ=255)                         tCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcg                                                                                                               >  1:1511278/1‑140 (MQ=255)                           cGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcggc                                                                                                             >  1:1207613/1‑140 (MQ=255)                             gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                                           >  2:297937/1‑140 (MQ=255)                             gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                                           >  2:253665/1‑140 (MQ=255)                             gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                                           >  1:221664/1‑140 (MQ=255)                             gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                                           <  2:1284020/140‑1 (MQ=255)                              ttGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCggcggc                                                                                                          <  1:1379935/140‑1 (MQ=255)                              ttGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCggcggc                                                                                                          <  2:1268412/140‑1 (MQ=255)                               tGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGgcggcg                                                                                                         <  1:286174/140‑1 (MQ=255)                               tGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGgcggcg                                                                                                         <  2:523666/140‑1 (MQ=255)                                   cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                                     <  2:588458/140‑1 (MQ=255)                                   cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                                     <  2:883630/140‑1 (MQ=255)                                   cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                                     <  2:1511278/140‑1 (MQ=255)                                      aaaaaGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAat                                                                                                  >  1:495859/1‑140 (MQ=255)                                        aaaGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAatat                                                                                                <  2:887097/140‑1 (MQ=255)                                            gTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGa                                                                                            >  2:973588/1‑140 (MQ=255)                                             tATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGaa                                                                                           >  1:135905/1‑140 (MQ=255)                                                  tcggtcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATg                                                                                      >  1:1488675/1‑140 (MQ=255)                                                   cggtcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGc                                                                                     <  1:989068/140‑1 (MQ=255)                                                      tcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCAt                                                                                  >  1:319419/1‑140 (MQ=255)                                                      tcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCAt                                                                                  >  2:227372/1‑140 (MQ=255)                                                        gACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATct                                                                                <  1:297937/140‑2 (MQ=255)                                                         aCCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCaa                                                                               >  1:102941/1‑140 (MQ=255)                                                             gggAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAg                                                                           <  1:253665/140‑1 (MQ=255)                                                              ggAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGt                                                                          <  2:492671/140‑1 (MQ=255)                                                              ggAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGt                                                                          <  1:1373530/140‑1 (MQ=255)                                                              ggAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGt                                                                          >  2:163191/1‑140 (MQ=255)                                                                aGCACTGACCAGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAAtt                                                                             <  1:1384667/135‑1 (MQ=255)                                                                aGCACTGACCAGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAAtt                                                                             >  2:1384667/1‑135 (MQ=255)                                                                   aCTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGcc                                                                     <  2:221664/140‑1 (MQ=255)                                                                    cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCa                                                                    >  1:1066387/1‑140 (MQ=255)                                                                       aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGa                                                                 >  2:524816/1‑140 (MQ=255)                                                                            tATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGc                                                            >  1:1007996/1‑140 (MQ=255)                                                                            tATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGc                                                            >  1:1285615/1‑140 (MQ=255)                                                                                cTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCa                                                        <  1:1401670/140‑1 (MQ=255)                                                                                 tGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCaa                                                       >  2:1138898/1‑140 (MQ=255)                                                                                   gATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGa                                                     >  1:253287/1‑140 (MQ=255)                                                                                   gATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGa                                                     >  2:1379205/1‑140 (MQ=255)                                                                                   gATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGa                                                     >  1:939069/1‑140 (MQ=255)                                                                                   gATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGa                                                     >  2:555953/1‑140 (MQ=255)                                                                                    aTCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGaa                                                    >  1:794274/1‑140 (MQ=255)                                                                                      cGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAAtt                                                  <  2:378370/140‑1 (MQ=255)                                                                                      cGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAAtt                                                  <  2:270216/140‑1 (MQ=255)                                                                                      cGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAAtt                                                  <  1:973588/140‑1 (MQ=255)                                                                                        ccTGGTCTGTAAAGGCTGGGTGGAAAGGTTGTCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGATGGCCAGGACCTGCACCAAGAATTaa                                                >  2:1272267/1‑140 (MQ=255)                                                                                            gTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACaaa                                            <  1:1259626/140‑1 (MQ=255)                                                                                             tCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACaaaa                                           >  2:567846/1‑140 (MQ=255)                                                                                             tCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACaaaa                                           >  1:449328/1‑140 (MQ=255)                                                                                                 tAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAAcc                                       >  2:889807/1‑140 (MQ=255)                                                                                                     ggCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGAc                                   <  1:567846/140‑1 (MQ=255)                                                                                                      gCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGAcg                                  >  1:1235688/1‑140 (MQ=255)                                                                                                      gCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGAcg                                  >  2:584609/1‑140 (MQ=255)                                                                                                      gCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGAcg                                  <  1:163191/140‑1 (MQ=255)                                                                                                           gTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa                             <  2:1066387/140‑1 (MQ=255)                                                                                                           gTGGAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa                             <  1:227372/140‑1 (MQ=255)                                                                                                             ggAAAGGTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACg                           <  1:555953/140‑1 (MQ=255)                                                                                                                   gTTGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTgg                     <  1:1413206/140‑1 (MQ=255)                                                                                                                    ttGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGc                    <  2:794274/140‑1 (MQ=255)                                                                                                                     tGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCa                   <  1:524816/140‑1 (MQ=255)                                                                                                                     tGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCa                   >  2:1331377/1‑140 (MQ=255)                                                                                                                     tGCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCa                   >  1:380259/1‑140 (MQ=255)                                                                                                                      gCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCaa                  <  2:1116262/140‑1 (MQ=255)                                                                                                                      gCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCaa                  >  1:1100004/1‑140 (MQ=255)                                                                                                                      gCCGAACCCGAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCaa                  <  2:909949/140‑1 (MQ=255)                                                                                                                               gAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGt         <  1:1138898/140‑1 (MQ=255)                                                                                                                               gAATGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGt         <  2:1235688/140‑1 (MQ=255)                                                                                                                                 aTGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCAGCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTAt       <  1:889807/140‑1 (MQ=255)                                                                                                                                 aTGACAAGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTAt       <  2:1488675/140‑1 (MQ=255)                                                                                                                                      aaGAGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCt  <  2:102941/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                         TATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCT  >  NC_000913/1619263‑1619535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑