BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,748,665	G→T	R235L (CGC→CTC)	ypjD →	cytochrome c assembly family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,748,665	0	G	T	100.0%	572.8 / NA	159	R235L (CGC→CTC)	ypjD	cytochrome c assembly family protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (88/71); total (88/71)

Only 100 of 164 total aligned reads displayed.

GCTTTGCACTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTT  >  NC_000913/2748531‑2748799

gCTTTGCACTGGCCTGTTCTACATGCACAACTTATTTAGCATGAAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGCGACATTATCATGAAGGATGGCGTGGACTCcgcg                                                                                                                                   <  2:390886/140‑1 (MQ=255)

    tGCACTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGcgtcgt                                                                                                                               <  2:1260454/140‑1 (MQ=255)

        cTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTgg                                                                                                                           >  1:993463/1‑140 (MQ=255)

        cTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTgg                                                                                                                           >  1:62192/1‑140 (MQ=255)

         tGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGt                                                                                                                          <  1:1634319/140‑1 (MQ=255)

          ggCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGtt                                                                                                                         >  2:1473480/1‑140 (MQ=255)

          ggCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGtt                                                                                                                         >  1:889837/1‑140 (MQ=255)

          ggCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGtt                                                                                                                         >  2:553284/1‑140 (MQ=255)

           gCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGttt                                                                                                                        >  1:568754/1‑140 (MQ=255)

           gCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGttt                                                                                                                        <  2:62192/140‑1 (MQ=255)

              tGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAAc                                                                                                                     >  1:1280661/1‑140 (MQ=255)

                ttCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGt                                                                                                                   >  2:1024385/1‑140 (MQ=255)

                ttCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGACGTGGACTCCGCGTCGTCTGGTTTAACGt                                                                                                                   >  1:1325940/1‑140 (MQ=255)

                      aTGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGCGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCggg                                                                                                             >  2:504328/1‑140 (MQ=255)

                        gCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGgcg                                                                                                           <  1:553284/140‑1 (MQ=255)

                        gCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGgcg                                                                                                           <  2:521180/140‑1 (MQ=255)

                        gCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGgcg                                                                                                           <  1:1473480/140‑1 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGTGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGggcg                                                                                                         >  2:419202/1‑140 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGcgcg                                                                                                         <  2:606523/140‑1 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGcgcg                                                                                                         <  2:606524/140‑1 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGcgcg                                                                                                         >  1:796956/1‑140 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGcgcg                                                                                                         >  1:1233798/1‑140 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGcgcg                                                                                                         >  1:606523/1‑140 (MQ=255)

                          acaACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGcgcg                                                                                                         <  1:1089738/140‑1 (MQ=255)

                                       cATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGacac                                                                                            <  1:235435/140‑1 (MQ=255)

                                         tGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTg                                                                                          >  2:1124137/1‑140 (MQ=255)

                                         tGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTg                                                                                          >  2:1178564/1‑140 (MQ=255)

                                                     aCAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGc                                                                              >  2:762129/1‑140 (MQ=255)

                                                          gCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCg                                                                         <  2:1358135/140‑1 (MQ=255)

                                                            tgtgCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGaa                                                                       >  2:876412/1‑140 (MQ=255)

                                                            tgtgCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGACGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGaa                                                                       <  2:1325940/140‑1 (MQ=255)

                                                             gtgCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAAt                                                                      >  1:763970/1‑140 (MQ=255)

                                                                ctctctATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGt                                                                   >  1:454916/1‑140 (MQ=255)

                                                                   tctATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCca                                                                >  1:458195/1‑140 (MQ=255)

                                                                   tctATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCca                                                                >  1:22012/1‑140 (MQ=255)

                                                                    ctATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCcag                                                               <  2:713378/140‑1 (MQ=255)

                                                                    ctATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCcag                                                               <  1:1178564/140‑1 (MQ=255)

                                                                    ctATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCcag                                                               >  1:755968/1‑140 (MQ=255)

                                                                     tATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCcagc                                                              <  2:1007884/140‑1 (MQ=255)

                                                                     tATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCcagc                                                              <  1:1378048/140‑1 (MQ=255)

                                                                     tATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATCCTGACACTGGCCTACTTCGGCAGCCGTATTGTCcagc                                                              <  2:292293/140‑1 (MQ=255)

                                                                      aTCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCcagca                                                             <  2:359453/140‑1 (MQ=255)

                                                                        cgtggcgtggTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGt                                                           >  2:51750/1‑140 (MQ=255)

                                                                          tggcgtggTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTa                                                         >  1:410379/1‑140 (MQ=255)

                                                                          tggcgtggTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTa                                                         <  1:1124553/140‑1 (MQ=255)

                                                                            gcgtggTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAAt                                                       >  2:368680/1‑140 (MQ=255)

                                                                             cgtggTTTGTCTATATTGTGCTGCTGTGGTGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATc                                                      >  2:1616103/1‑140 (MQ=255)

                                                                             cgtggTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATc                                                      >  2:982979/1‑140 (MQ=255)

                                                                             cgtggTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATc                                                      >  1:200593/1‑140 (MQ=255)

                                                                                               tgctgcTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAgg                                    >  2:822807/1‑140 (MQ=255)

                                                                                               tgctgcTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAgg                                    >  2:1015840/1‑140 (MQ=255)

                                                                                               tgctgcTGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAgg                                    >  2:1418092/1‑140 (MQ=255)

                                                                                                gctgctGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGa                                   >  2:802707/1‑140 (MQ=255)

                                                                                                gctgctGTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGa                                   >  2:1689352/1‑140 (MQ=255)

                                                                                                 ctgctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAg                                  >  1:1406225/1‑140 (MQ=255)

                                                                                                 ctgctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAg                                  >  2:495196/1‑140 (MQ=255)

                                                                                                   gctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGtt                                <  1:1594354/140‑1 (MQ=255)

                                                                                                    ctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGttt                               >  2:1214841/1‑140 (MQ=255)

                                                                                                    ctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGttt                               >  1:52379/1‑140 (MQ=255)

                                                                                                    ctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGttt                               >  1:728971/1‑140 (MQ=255)

                                                                                                    ctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGttt                               >  1:712643/1‑140 (MQ=255)

                                                                                                    ctgTGGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGttt                               >  2:1527052/1‑140 (MQ=255)

                                                                                                     tgtgGGGACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTc                              <  2:1563845/140‑1 (MQ=255)

                                                                                                         gggACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCt                          >  1:1006442/1‑140 (MQ=255)

                                                                                                         gggACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTAGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCt                          >  1:1316977/1‑140 (MQ=255)

                                                                                                          ggACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTg                         <  2:1280661/140‑1 (MQ=255)

                                                                                                           gACATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTgg                        >  2:1674746/1‑140 (MQ=255)

                                                                                                             cATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGaa                      <  1:1527052/140‑1 (MQ=255)

                                                                                                             cATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGaa                      <  1:1214841/140‑1 (MQ=255)

                                                                                                             cATTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGaa                      <  2:755968/140‑1 (MQ=255)

                                                                                                              aTTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAac                     >  2:1466685/1‑140 (MQ=255)

                                                                                                              aTTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAac                     <  2:1186648/140‑1 (MQ=255)

                                                                                                              aTTATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAac                     >  2:188295/1‑140 (MQ=255)

                                                                                                                tATCATGAAGGATGGCGTGGACTCCGTGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCTAGAAAAGGAGTTTCCCCTGGAacac                   <  1:362056/140‑1 (MQ=255)

                                                                                                                tATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAacac                   <  2:629535/140‑1 (MQ=255)

                                                                                                                tATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAacac                   <  1:1015840/140‑1 (MQ=255)

                                                                                                                tATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAacac                   <  1:822807/140‑1 (MQ=255)

                                                                                                                tATCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAacac                   <  2:278253/140‑1 (MQ=255)

                                                                                                                 aTCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAAcaca                  >  2:843883/1‑140 (MQ=255)

                                                                                                                 aTCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAAcaca                  <  1:1418092/140‑1 (MQ=255)

                                                                                                                  tCATGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACAt                 <  2:1354658/140‑1 (MQ=255)

                                                                                                                     tGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTc              <  1:843883/140‑1 (MQ=255)

                                                                                                                     tGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTc              <  1:845393/140‑1 (MQ=255)

                                                                                                                     tGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTc              >  1:625968/1‑140 (MQ=255)

                                                                                                                     tGAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTc              <  2:161594/140‑1 (MQ=255)

                                                                                                                      gAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTc              >  1:496954/1‑139 (MQ=255)

                                                                                                                      gAAGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTc              <  2:496954/139‑1 (MQ=255)

                                                                                                                       aaGGATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTcta            >  1:880122/1‑140 (MQ=255)

                                                                                                                          gATGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTctacta         >  2:918433/1‑140 (MQ=255)

                                                                                                                            tGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTctactact       <  2:431292/140‑1 (MQ=255)

                                                                                                                            tGGCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTctactact       >  2:888279/1‑140 (MQ=255)

                                                                                                                             ggCGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTctactacta      <  1:1672257/140‑1 (MQ=255)

                                                                                                                               cGTGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACg    <  2:22012/140‑1 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  <  1:516741/140‑1 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  <  1:1674746/140‑1 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  <  2:410379/140‑1 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  <  1:36679/140‑1 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  <  2:1552206/140‑1 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  >  2:1165702/1‑140 (MQ=255)

                                                                                                                                 tGGACTCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt  <  1:918433/140‑1 (MQ=255)

GCTTTGCACTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTT  >  NC_000913/2748531‑2748799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`