BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,511,065	C→A	V120F (GTT→TTT)	yhfY ←	conserved protein YhfY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,511,065	0	C	A	100.0%	442.0 / NA	127	V120F (GTT→TTT)	yhfY	conserved protein YhfY
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (59/68); total (59/68)

Only 100 of 128 total aligned reads displayed.

GCGGAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAACCTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGATTG  >  NC_000913/3510930‑3511200

gcggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAActct                                                                                                                                     >  2:1444943/1‑140 (MQ=255)

gcggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAActct                                                                                                                                     >  2:490238/1‑140 (MQ=255)

gcggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAActct                                                                                                                                     >  2:317051/1‑140 (MQ=255)

gcggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAActct                                                                                                                                     >  1:413245/1‑140 (MQ=255)

gcggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAActct                                                                                                                                     >  1:1328356/1‑140 (MQ=255)

gcggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAActct                                                                                                                                     >  1:725961/1‑140 (MQ=255)

 cggAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCtt                                                                                                                                    <  2:1204636/140‑1 (MQ=255)

     aaTCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGtt                                                                                                                                <  1:1068979/140‑1 (MQ=255)

         aGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTagca                                                                                                                            <  2:367080/140‑1 (MQ=255)

           cgcCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTagcagc                                                                                                                          <  1:505311/140‑1 (MQ=255)

           cgcCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTagcagc                                                                                                                          <  1:845593/140‑1 (MQ=255)

            gcCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGcc                                                                                                                         <  2:884187/140‑1 (MQ=255)

            gcCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGcc                                                                                                                         <  1:1234410/140‑1 (MQ=255)

            gcCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGcc                                                                                                                         >  1:152714/1‑140 (MQ=255)

             ccGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGcca                                                                                                                        >  2:848609/1‑140 (MQ=255)

                ggTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTagcagc                                                                                                                          <  2:848597/135‑1 (MQ=255)

                ggTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTagcagc                                                                                                                          >  1:848597/1‑135 (MQ=255)

                ggTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTagca                                                                                                                            >  2:16867/1‑133 (MQ=255)

                   tatGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTTTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  2:1345411/138‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  2:333567/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  1:202316/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  1:1524458/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  2:818791/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  2:413245/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  2:903118/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  1:597719/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  1:1444943/140‑1 (MQ=255)

                   tCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccata                                                                                                                  <  1:1474406/140‑1 (MQ=255)

                    cTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCatccataa                                                                                                                 <  1:1164780/140‑1 (MQ=255)

                           ttCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCAtccataatccataa                                                                                                          >  1:1258738/1‑140 (MQ=255)

                              aaTGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAgg                                                                                                       <  2:1097067/140‑1 (MQ=255)

                              aaTGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAgg                                                                                                       <  1:684175/140‑1 (MQ=255)

                                    tCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGcc                                                                                                 <  2:1534719/140‑1 (MQ=255)

                                     cTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCa                                                                                                >  1:1613552/1‑140 (MQ=255)

                                     cTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCa                                                                                                >  1:497836/1‑140 (MQ=255)

                                               cTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGcc                                                                                      >  1:1503319/1‑140 (MQ=255)

                                               cTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGcc                                                                                      >  1:380325/1‑140 (MQ=255)

                                                   ttgCCTTGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCcttct                                                                                  >  1:1090010/1‑140 (MQ=255)

                                                       cTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGTTTGGCCAGCAAATAGCCTTCTTcac                                                                              >  1:1144781/1‑140 (MQ=255)

                                                       cTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTcac                                                                              <  1:848609/140‑1 (MQ=255)

                                                        tCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTcaca                                                                             <  2:1058443/140‑1 (MQ=255)

                                                        tCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTcaca                                                                             <  1:1075385/140‑1 (MQ=255)

                                                        tCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTcaca                                                                             <  1:317051/140‑1 (MQ=255)

                                                           tttCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACgg                                                                          >  1:1676663/1‑140 (MQ=255)

                                                              cTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGtt                                                                       <  2:152714/140‑1 (MQ=255)

                                                              cTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGtt                                                                       <  2:1613552/140‑1 (MQ=255)

                                                                 ttCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTcaca                                                                             >  2:451168/1‑131 (MQ=255)

                                                                 ttCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTcaca                                                                             <  1:451168/131‑1 (MQ=255)

                                                                    cTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTc                                                                 >  1:27993/1‑140 (MQ=255)

                                                                    cTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTc                                                                 >  2:1063528/1‑140 (MQ=255)

                                                                    cTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTc                                                                 >  2:792234/1‑140 (MQ=255)

                                                                     ttGAATTAAATGTTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGCGAGCTTCAAAACTATTCGTTAGCAGACATCCATAATCCATAAAGGTTGGCTAGCCAATAGCCTTCTTCTAACGGGTTAACTTcc                                                                >  2:1162259/1‑140 (MQ=255)

                                                                     ttGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTcc                                                                <  2:467053/140‑1 (MQ=255)

                                                                      tGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCa                                                               >  1:259548/1‑140 (MQ=255)

                                                                           tAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCg                                                          >  1:917128/1‑140 (MQ=255)

                                                                                  tCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCt                                                   >  2:656335/1‑140 (MQ=255)

                                                                                   tcattttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCt                                                   >  1:1648584/4‑139 (MQ=255)

                                                                                   tcattttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCt                                                   <  2:1648584/136‑1 (MQ=255)

                                                                                   cATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCtt                                                  <  2:259548/140‑1 (MQ=255)

                                                                                       tttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTcaac                                              <  2:1676663/140‑1 (MQ=255)

                                                                                       tttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTcaac                                              <  2:648374/140‑1 (MQ=255)

                                                                                       tttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTcaac                                              <  2:595667/140‑1 (MQ=255)

                                                                                       tttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTcaac                                              <  2:1258738/140‑1 (MQ=255)

                                                                                        ttttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTcaaca                                             <  2:27993/140‑1 (MQ=255)

                                                                                         tttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTcaacaa                                            >  1:233559/1‑140 (MQ=255)

                                                                                         tttGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCAATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTca                                                <  2:357676/136‑1 (MQ=255)

                                                                                            gAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAacac                                         <  1:499482/140‑1 (MQ=255)

                                                                                               tatTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTg                                      >  2:1251883/1‑140 (MQ=255)

                                                                                                atTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGa                                     <  1:1098047/140‑1 (MQ=255)

                                                                                                atTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAACCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGa                                     <  1:161662/140‑1 (MQ=255)

                                                                                                  ttAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATg                                   <  2:233559/140‑1 (MQ=255)

                                                                                                     ggTTGTGCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCaa                                <  1:1251883/140‑1 (MQ=255)

                                                                                                         gtgCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGc                            >  1:93328/1‑140 (MQ=255)

                                                                                                          tgCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGca                           >  1:12961/1‑140 (MQ=255)

                                                                                                          tgCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGca                           >  1:1689660/1‑140 (MQ=255)

                                                                                                          tgCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGca                           >  2:303181/1‑140 (MQ=255)

                                                                                                          tgCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGca                           >  2:624231/1‑140 (MQ=255)

                                                                                                          tgCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGca                           >  2:773154/1‑140 (MQ=255)

                                                                                                          tgCGACATGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGca                           >  2:750642/1‑140 (MQ=255)

                                                                                                           gCGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGcac                          <  1:376435/140‑1 (MQ=255)

                                                                                                            cGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCaa                                >  2:1113316/1‑133 (MQ=255)

                                                                                                            cGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCaa                                <  1:1113316/133‑1 (MQ=255)

                                                                                                            cGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGcaca                         >  1:300169/1‑140 (MQ=255)

                                                                                                            cGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGcaca                         >  1:812436/1‑140 (MQ=255)

                                                                                                            cGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGcaca                         >  2:1584529/1‑140 (MQ=255)

                                                                                                            cGACGTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGcaca                         >  2:1129562/1‑140 (MQ=255)

                                                                                                                gTGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACgg                     >  2:921960/1‑140 (MQ=255)

                                                                                                                 tGGATTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGc                    <  1:773154/140‑1 (MQ=255)

                                                                                                                    aTTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTg                 >  2:124999/1‑140 (MQ=255)

                                                                                                                    aTTTGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTg                 >  1:759236/1‑140 (MQ=255)

                                                                                                                      ttGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGcc               <  2:300169/140‑1 (MQ=255)

                                                                                                                      ttGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGcc               <  2:12961/140‑1 (MQ=255)

                                                                                                                      ttGTCGGGAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGcc               <  1:656335/140‑1 (MQ=255)

                                                                                                                           gggAGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTgg          <  2:759236/140‑1 (MQ=255)

                                                                                                                              aGCTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTg       >  2:1441164/1‑140 (MQ=255)

                                                                                                                                cTTCAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGa     <  1:921960/140‑1 (MQ=255)

                                                                                                                                   cAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGATTg  >  2:205783/1‑140 (MQ=255)

                                                                                                                                   cAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGATTg  >  1:740247/1‑140 (MQ=255)

                                                                                                                                   cAAAACTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGATTg  >  1:1195536/1‑140 (MQ=255)

                                                                                                                                   cAAAACTCTTCGTTAGAAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGATTg  >  1:951294/1‑140 (MQ=255)

GCGGAAATCAGCGCCGGGTTCTGGCGTTTCAATGCTTCTACAAACATCTTGTTGCCTCGTTTCTGTTCCTTGAATTAAATATTCATTTTTTTGAATATTTAGGTTGTGCGACGTGGATTTGTCGGGAGCTTCAAACCTCTTCGTTAGCAGCCATCCATAATCCATAAAGGTTGGCCAGCAAATAGCCTTCTTCACACGGGTTAACTTCCAGTGCGAATTCCTTCAACAACACCTGATGCAATTGCACAACGGCTTGCCAGTGGCTGGATTG  >  NC_000913/3510930‑3511200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`