BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,897,522	G→T	R6L (CGG→CTG)	cbrB →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,897,522	0	G	T	100.0%	465.0 / NA	129	R6L (CGG→CTG)	cbrB	putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (76/53); total (76/53)

Only 100 of 129 total aligned reads displayed.

CTTTCGCAGTTACCTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCG  >  NC_000913/3897386‑3897658

cTTTCGCAGTTACCTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGt                                                                                                                                       >  2:350723/1‑140 (MQ=255)

    cGCAGTTACCTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATa                                                                                                                                   >  1:1395446/1‑140 (MQ=255)

             cTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGa                                                                                                                          <  2:878236/140‑1 (MQ=255)

             cTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGa                                                                                                                          <  1:129568/140‑1 (MQ=255)

                     tgGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTAttt                                                                                                                  <  2:969850/140‑1 (MQ=255)

                     tgGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTAttt                                                                                                                  >  1:554631/1‑140 (MQ=255)

                     tgGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTAttt                                                                                                                  >  1:1439486/1‑140 (MQ=255)

                     tgGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTAttt                                                                                                                  >  2:700857/1‑140 (MQ=255)

                       gAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTg                                                                                                                >  2:471035/1‑140 (MQ=255)

                        aaaGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGc                                                                                                               <  2:435854/140‑1 (MQ=255)

                        aaaGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGc                                                                                                               <  2:477650/140‑1 (MQ=255)

                        aaaGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGc                                                                                                               <  2:1089549/140‑1 (MQ=255)

                          aGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAg                                                                                                             >  1:580333/1‑140 (MQ=255)

                              cgTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGtttt                                                                                                         >  1:1284888/1‑140 (MQ=255)

                               gTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTa                                                                                                        >  2:1212306/1‑140 (MQ=255)

                                 ggTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAgg                                                                                                      <  2:1197868/140‑1 (MQ=255)

                                  gTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGa                                                                                                     <  2:554631/140‑1 (MQ=255)

                                   ttGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGAc                                                                                                    <  2:132204/140‑1 (MQ=255)

                                          atTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAAt                                                                                             <  2:1321552/140‑1 (MQ=255)

                                          atTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAAt                                                                                             <  2:1240022/140‑1 (MQ=255)

                                           ttACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAAtt                                                                                            >  2:372470/1‑140 (MQ=255)

                                             aCGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTgg                                                                                          >  2:1450032/1‑140 (MQ=255)

                                             aCGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTgg                                                                                          >  1:1133354/1‑140 (MQ=255)

                                                gCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGtt                                                                                                <  2:1271600/131‑1 (MQ=255)

                                                gCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGtt                                                                                                >  1:1271600/1‑131 (MQ=255)

                                                 cATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGtt                                                                                      >  1:1534229/1‑140 (MQ=255)

                                                 cATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGtt                                                                                      <  1:1625404/140‑1 (MQ=255)

                                                 cATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGtt                                                                                      <  2:1480442/140‑1 (MQ=255)

                                                      ttcttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGtt                                                                                 >  1:873782/1‑140 (MQ=255)

                                                      ttcttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGtt                                                                                 >  1:1034799/1‑140 (MQ=255)

                                                      ttcttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGtt                                                                                 >  1:1339200/1‑140 (MQ=255)

                                                      ttcttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGtt                                                                                 >  1:354335/1‑140 (MQ=255)

                                                        cttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTc                                                                               <  2:873782/140‑1 (MQ=255)

                                                        cttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTc                                                                               <  1:99142/140‑1 (MQ=255)

                                                        cttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTc                                                                               <  2:1468483/140‑1 (MQ=255)

                                                        cttcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTc                                                                               <  2:1395446/140‑1 (MQ=255)

                                                          tcACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCtt                                                                             <  2:1623819/140‑1 (MQ=255)

                                                           cacaCTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTg                                                                            <  2:580333/140‑1 (MQ=255)

                                                           cacaCTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTg                                                                            >  1:175917/1‑140 (MQ=255)

                                                           cacaCTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTg                                                                            >  1:1636323/1‑140 (MQ=255)

                                                              gcTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  1:374457/139‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  2:1034799/140‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  1:1503041/140‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  2:1133354/140‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  1:729634/140‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  2:1534229/140‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGCCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  1:308770/140‑1 (MQ=255)

                                                              acTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTCGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  1:1377469/140‑1 (MQ=255)

                                                               cTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCct                                                                        <  1:1014506/140‑1 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTc                                                                               <  1:611974/132‑1 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTc                                                                               >  2:611974/1‑132 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                       >  1:750562/1‑140 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                       >  1:605845/1‑140 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                       >  2:655364/1‑140 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                       >  1:1492354/1‑140 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                       >  2:1676896/1‑140 (MQ=255)

                                                                tCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGCAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctc                                                                       >  1:1361854/1‑140 (MQ=255)

                                                                 cccTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCctct                                                                      >  2:1330108/1‑140 (MQ=255)

                                                                     tCACTTACCCCGCTTAAATTGGCGCTCAAAGG‑AAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         >  2:1064476/1‑132 (MQ=255)

                                                                     tCACTTACCCCGCTTAAATTGGCGCTCAAAGG‑AAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTcc                                                                         <  1:1064476/132‑1 (MQ=255)

                                                                           aCCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttctt                                                            <  2:1492354/140‑1 (MQ=255)

                                                                            ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCtt                                                                             <  1:1060477/122‑1 (MQ=255)

                                                                            ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCtt                                                                             >  2:1060477/1‑122 (MQ=255)

                                                                            ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttcttc                                                           >  1:1271282/1‑140 (MQ=255)

                                                                            ccccGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATAttcttc                                                           >  2:1325184/1‑140 (MQ=255)

                                                                                 cTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCaaa                                                      >  2:393148/1‑140 (MQ=255)

                                                                                         ggCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGc                                              <  2:175917/140‑1 (MQ=255)

                                                                                            gcTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTgg                                           >  2:211772/1‑140 (MQ=255)

                                                                                                 aaGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCtt                                      <  2:443665/140‑1 (MQ=255)

                                                                                                 aaGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCtt                                      <  2:117440/140‑1 (MQ=255)

                                                                                                 aaGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCtt                                      <  1:1332031/140‑1 (MQ=255)

                                                                                                 aaGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCtt                                      <  2:1271282/140‑1 (MQ=255)

                                                                                                   ggTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTg                                    <  1:393148/140‑1 (MQ=255)

                                                                                                     taagtaaAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTggg                                  <  2:1639684/140‑1 (MQ=255)

                                                                                                       agtaaAGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTg                                >  2:1154940/1‑140 (MQ=255)

                                                                                                            aGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGata                             >  1:811221/1‑138 (MQ=255)

                                                                                                            aGGGAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGata                             <  2:811221/138‑1 (MQ=255)

                                                                                                              ggAGTTTGATATGTTTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATAc                         >  1:1133115/1‑140 (MQ=255)

                                                                                                              ggAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATAc                         >  1:1482442/1‑140 (MQ=255)

                                                                                                              ggAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATAc                         >  2:59614/1‑140 (MQ=255)

                                                                                                              ggAGTTTGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATAc                         >  2:509344/1‑140 (MQ=255)

                                                                                                                  tttGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATcc                     >  2:663017/1‑140 (MQ=255)

                                                                                                                   ttGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCa                    >  2:782806/1‑140 (MQ=255)

                                                                                                                   ttGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCa                    >  2:1416319/1‑140 (MQ=255)

                                                                                                                   ttGATATGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCa                    >  1:1202898/1‑140 (MQ=255)

                                                                                                                        atGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAAtttt               >  1:417638/1‑140 (MQ=255)

                                                                                                                        atGTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAAtttt               >  1:6747/1‑140 (MQ=255)

                                                                                                                          gTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtc             >  2:439002/1‑140 (MQ=255)

                                                                                                                          gTCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtc             <  1:782806/140‑1 (MQ=255)

                                                                                                                           tCTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtct            >  2:1182727/1‑140 (MQ=255)

                                                                                                                            cTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtctc           >  1:449619/1‑140 (MQ=255)

                                                                                                                            cTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtctc           >  1:245580/1‑140 (MQ=255)

                                                                                                                            cTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtctc           >  1:912932/1‑140 (MQ=255)

                                                                                                                            cTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtctc           >  2:77703/1‑140 (MQ=255)

                                                                                                                            cTGTTTCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTtctc           >  2:155883/1‑140 (MQ=255)

                                                                                                                               tttCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTa        >  2:646604/1‑140 (MQ=255)

                                                                                                                               tttCACGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTa        >  1:396825/1‑140 (MQ=255)

                                                                                                                                    cGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTc   >  1:1175359/1‑140 (MQ=255)

                                                                                                                                    cGTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTc   >  1:92932/1‑140 (MQ=255)

                                                                                                                                     gTCTGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCg  >  2:400311/1‑140 (MQ=255)

CTTTCGCAGTTACCTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAGGTAAGTAAAGGGAGTTTGATATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCG  >  NC_000913/3897386‑3897658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`