| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,185,246 | Δ1 bp | coding (4002/4029 nt) | rpoB → | RNA polymerase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,185,246 | 0 | T | . | 98.7% | 307.3 / ‑1.7 | 74 | coding (4002/4029 nt) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (37/36); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
ATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGTTTCTGAAAGCG > NC_000913/4185112‑4185379 | aTGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAAc > 1:552574/1‑140 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGa > 2:519305/1‑140 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGa < 1:521030/140‑1 (MQ=255) aGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAg < 1:358651/140‑1 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAg > 2:1271580/1‑140 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAg > 2:721525/1‑140 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAg > 1:1271217/1‑140 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAg > 1:715454/1‑140 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAg > 1:141613/1‑140 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAg > 2:85312/1‑140 (MQ=255) tgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTa > 2:1496485/1‑140 (MQ=255) gTGAACGGTCGTACCAAAGAGGATAAAAACATCGTTGACGGGAACCATCAGATGGAGCCGGGCATGGCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGGTCGCTGGG‑ATCAACATCGAACTGGAAGAAGAATAATtc < 2:141613/140‑1 (MQ=255) tGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATtct > 1:1410711/1‑140 (MQ=255) gAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATtctc < 2:715454/140‑1 (MQ=255) gAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATtctc < 2:1271217/140‑1 (MQ=255) aaCGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCg > 2:917817/1‑140 (MQ=255) aaCGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCg < 1:1239860/140‑1 (MQ=255) aaCGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCg < 2:196006/140‑1 (MQ=255) aCGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGc < 1:755928/140‑1 (MQ=255) cGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCaaa < 1:1271580/140‑1 (MQ=255) tACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACa < 2:1410711/140‑1 (MQ=255) cAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGt < 1:62163/140‑1 (MQ=255) aTGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCAct > 1:598857/1‑140 (MQ=255) aTGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCAct > 2:541494/1‑140 (MQ=255) tataAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCActgct > 2:1020034/1‑140 (MQ=255) taAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGt < 1:296944/140‑1 (MQ=255) taAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGt < 2:793622/140‑1 (MQ=255) aCATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGt < 1:541494/140‑1 (MQ=255) cATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGt > 2:228079/1‑140 (MQ=255) cATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGtt > 1:870779/1‑140 (MQ=255) tCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaa > 1:185182/1‑140 (MQ=255) tCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaa > 1:571590/1‑140 (MQ=255) tCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaa > 1:1409128/1‑140 (MQ=255) cGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaaa > 2:387283/1‑140 (MQ=255) cGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaaa > 2:594572/1‑140 (MQ=255) gTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaaaa > 1:793063/1‑140 (MQ=255) tGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAAc > 1:639470/1‑140 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGa > 2:31561/1‑89 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGa < 1:31561/89‑1 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAg < 1:85312/140‑1 (MQ=255) ccATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCgg < 2:185182/140‑1 (MQ=255) cATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGa < 2:598857/140‑1 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGAt < 1:721525/140‑1 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGAt < 1:549687/140‑1 (MQ=255) aTGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGc > 1:1201166/1‑140 (MQ=255) gCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACt > 2:816311/1‑140 (MQ=255) cGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTcc > 2:953940/1‑140 (MQ=255) ggCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGTGGATTGTGCTAACTCCGa > 2:1106075/1‑140 (MQ=255) gCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGAc < 2:674558/140‑1 (MQ=255) gCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGAc < 1:1496485/140‑1 (MQ=255) cAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGc < 2:1371866/140‑1 (MQ=255) aaTCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCaaa > 2:991862/1‑140 (MQ=255) aTCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAAt < 1:1020034/140‑1 (MQ=255) tCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATc > 1:743744/1‑140 (MQ=255) ttCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGt < 1:387283/140‑1 (MQ=255) tCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTg < 1:478746/140‑1 (MQ=255) tCAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTg > 1:246244/1‑140 (MQ=255) cAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGa > 1:310630/1‑140 (MQ=255) cAACGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGa < 2:743744/140‑1 (MQ=255) cGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAATCCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAg < 2:310630/140‑1 (MQ=255) cGTATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAg < 2:631424/140‑1 (MQ=255) tATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTC‑CGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCaa < 2:937646/126‑1 (MQ=255) tATTGTTGAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTC‑CGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCaa > 1:937646/1‑126 (MQ=255) tgttgAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATtta > 2:1029738/1‑140 (MQ=255) tgAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATttatta < 2:1221193/140‑1 (MQ=255) tgAAAGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATttatta < 1:953940/140‑1 (MQ=255) aaaGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATttatta > 2:713069/1‑138 (MQ=255) aaaGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATttatta < 1:713069/138‑1 (MQ=255) aaaGAGATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTaaa < 1:1388621/140‑1 (MQ=255) agagATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGt > 2:703487/1‑140 (MQ=255) agagATTCGTTCGCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAAACCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGt < 2:1409128/140‑1 (MQ=255) ttcgttcgCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGTGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGTTTccg < 1:1106075/140‑3 (MQ=255) ttcgttcgCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGTTTCTg > 2:687829/1‑140 (MQ=255) ttcgttcgCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGTTTCTg > 1:683865/1‑140 (MQ=255) cgCTGGG‑ATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGTTTCTGAAAgcg < 1:594572/140‑1 (MQ=255) | ATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAACCCGGCAGCGGATTGTGCTAACTCCGACGGGAGCAAATCCGTGAAAGATTTATTAAAGTTTCTGAAAGCG > NC_000913/4185112‑4185379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |