Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,341,481	G→T	Q308H (CAG→CAT)	lapB →	lipopolysaccharide assembly protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,341,481	0	G	T	100.0%	227.4 / NA	65	Q308H (CAG→CAT)	lapB	lipopolysaccharide assembly protein B
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (36/29);  total (36/29)

AAACTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAG  >  NC_000913/1341348‑1341613                                                                                                                                      |                                                                                                                                     aaaCTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAg                                                                                                                                <  1:33815/140‑1 (MQ=255)    cTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGt                                                                                                                             >  1:112189/1‑140 (MQ=255)    cTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGt                                                                                                                             >  1:1333469/1‑140 (MQ=255)       ccGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACCGGTCTATATTACGAGCCATCTTCAGCGTCAt                                                                                                                          >  1:1357284/1‑140 (MQ=255)       ccGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCAt                                                                                                                          <  1:42638/140‑1 (MQ=255)       ccGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCAt                                                                                                                          >  2:1012771/1‑140 (MQ=255)       ccGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCAt                                                                                                                          <  1:22325/140‑1 (MQ=255)        cGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATc                                                                                                                         <  1:930142/140‑1 (MQ=255)              ggCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCa                                                                                                                   <  2:710313/140‑1 (MQ=255)                      tCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCgtgtg                                                                                                           <  1:339142/140‑1 (MQ=255)                        cTGCAGCGTGCGGCGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCAGATCTCATCGAAGCGCGCGACGGTAGCGAAGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGtt                                                                                                         >  2:1453520/1‑140 (MQ=255)                              cGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATaa                                                                                                   >  2:730992/1‑140 (MQ=255)                              cGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATaa                                                                                                   >  2:692155/1‑140 (MQ=255)                                tGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCa                                                                                                                   <  2:794976/122‑1 (MQ=255)                                tGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCa                                                                                                                   >  1:794976/1‑122 (MQ=255)                                 gCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCTTGTGTTCCATAAGtt                                                                                                <  2:1080800/140‑1 (MQ=255)                                   ggTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTaa                                                                                              <  2:1333469/140‑1 (MQ=255)                                          gagaACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGAtt                                                                                        >  1:812704/1‑139 (MQ=255)                                          gagaACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGAtt                                                                                        <  2:812704/139‑1 (MQ=255)                                             aaCACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCa                                                                                    >  1:790131/1‑140 (MQ=255)                                               cacCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACt                                                                                  >  2:609242/1‑140 (MQ=255)                                               cacCGGTGCCGATGCTGAATTGATGCTTGCGGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGGCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTTTTCCATAAGTTAATGGATTACCACt                                                                                  >  2:436719/1‑140 (MQ=255)                                                  cGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTAc                                                                                      >  2:401561/1‑133 (MQ=255)                                                  cGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTAc                                                                                      <  1:401561/133‑1 (MQ=255)                                                  cGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTAT‑TTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTaaa                                                                              >  1:320706/1‑140 (MQ=255)                                                       ccGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGaa                                                                          >  2:777136/1‑140 (MQ=255)                                                        cGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAg                                                                         <  2:112189/140‑1 (MQ=255)                                                              tGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTGTATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGgaag                                                                   >  1:605121/1‑140 (MQ=255)                                                                  ttGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAgg                                                               <  2:127416/140‑1 (MQ=255)                                                                    gATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGc                                                             <  1:802831/140‑1 (MQ=255)                                                                    gATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGc                                                             <  1:267650/140‑1 (MQ=255)                                                                       gcttgctGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTg                                                          >  1:396096/1‑140 (MQ=255)                                                                          tgctGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCa                                                       >  2:1232220/1‑140 (MQ=255)                                                                            ctGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCaaa                                                     <  2:1462659/140‑1 (MQ=255)                                                                             tGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAag                                                    <  1:777136/140‑1 (MQ=255)                                                                              gATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTGTATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAaga                                                   <  2:605121/140‑1 (MQ=255)                                                                               atatCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagag                                                  <  1:126463/140‑1 (MQ=255)                                                                               atatCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagag                                                  >  1:380228/1‑140 (MQ=255)                                                                                 atcatcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAagagag                                                <  1:1012771/140‑1 (MQ=255)                                                                                    atcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCt                                             >  2:947308/1‑140 (MQ=255)                                                                                    atcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCt                                             >  2:1190726/1‑140 (MQ=255)                                                                                     tcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTg                                            <  1:730992/140‑1 (MQ=255)                                                                                     tcGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTg                                            <  1:692155/140‑1 (MQ=255)                                                                                       gAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGAt                                          >  2:193894/1‑140 (MQ=255)                                                                                             cgcgACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGtgct                                    >  1:280073/1‑140 (MQ=255)                                                                                                          aGGCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGGCCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGtt                       >  1:1373968/1‑140 (MQ=255)                                                                                                            gCCGCACAGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTgg                     >  2:1496028/1‑140 (MQ=255)                                                                                                                cacaGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgag                 <  1:309723/140‑1 (MQ=255)                                                                                                                cacaGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgag                 <  2:317167/140‑1 (MQ=255)                                                                                                                 acaGGTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgaga                <  1:1496028/140‑1 (MQ=255)                                                                                                                     gTCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGt            >  1:1156016/1‑140 (MQ=255)                                                                                                                      tCTATATTACGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTa           <  2:635467/140‑1 (MQ=255)                                                                                                                              aCGCGCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTaa   <  1:609242/140‑1 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgag                 <  1:816314/125‑1 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCgag                 >  2:816314/1‑125 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACgtagt     <  2:1340734/137‑1 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACgtagt     >  1:1340734/1‑137 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:1213029/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:1216426/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:1423227/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:1334497/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:635297/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:1416427/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  2:388139/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  2:1419503/1‑140 (MQ=255)                                                                                                                               cgcgCCATCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAg  >  1:979555/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                     AAACTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAG  >  NC_000913/1341348‑1341613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑