Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	747,906	G→T	intergenic (‑137/+15)	abrB ← / ← ybgO	putative regulator/putative fimbrial protein YbgO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	747,906	0	G	T	100.0%	330.5 / NA	94	intergenic (‑137/+15)	abrB/ybgO	putative regulator/putative fimbrial protein YbgO
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (41/53);  total (41/53)

TCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCA  >  NC_000913/747769‑748035                                                                                                                                          |                                                                                                                                  tCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAtgg                                                                                                                                 >  1:471920/1‑140 (MQ=255) tCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAtgg                                                                                                                                 <  1:1246037/140‑1 (MQ=255)    ttCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGcat                                                                                                                              <  2:11383/140‑1 (MQ=255)    ttCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGcat                                                                                                                              <  1:1137152/140‑1 (MQ=255)        cTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGG‑AAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATgg                                                                                                                         >  2:1059010/1‑140 (MQ=255)          cccTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGt                                                                                                                        <  1:718991/140‑1 (MQ=255)            cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTaa                                                                                                                      >  1:1019437/1‑140 (MQ=255)            cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTaa                                                                                                                      <  2:83155/140‑1 (MQ=255)            cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTaa                                                                                                                      >  1:91669/1‑140 (MQ=255)            cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTaa                                                                                                                      <  1:1294785/140‑1 (MQ=255)             tCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTaaa                                                                                                                     >  2:1169537/1‑140 (MQ=255)             tCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTaaa                                                                                                                     >  2:1333062/1‑140 (MQ=255)              cATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAAt                                                                                                                    <  2:80303/140‑1 (MQ=255)              cATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAAt                                                                                                                    <  2:1204272/140‑1 (MQ=255)              cATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAAt                                                                                                                    <  1:213953/140‑1 (MQ=255)              cATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAAt                                                                                                                    <  2:755984/140‑1 (MQ=255)              cATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAAt                                                                                                                    <  2:21415/140‑1 (MQ=255)                ttattTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCa                                                                                                                  >  1:751582/1‑140 (MQ=255)                  attTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGt                                                                                                                <  1:1295478/140‑1 (MQ=255)                  attTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGt                                                                                                                <  1:874597/140‑1 (MQ=255)                       ctctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAg                                                                                                           >  2:269519/1‑140 (MQ=255)                        tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGt                                                                                                          <  2:81325/140‑1 (MQ=255)                        tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGt                                                                                                          <  1:624061/140‑1 (MQ=255)                         ctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGtt                                                                                                         >  2:54111/1‑140 (MQ=255)                         ctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGtt                                                                                                         >  2:884350/1‑140 (MQ=255)                             ggTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATc                                                                                                     <  1:820659/140‑1 (MQ=255)                                 tATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTaa                                                                                                 >  2:942595/1‑140 (MQ=255)                                  aTCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTaaa                                                                                                <  1:1010220/140‑1 (MQ=255)                                  aTCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTaaa                                                                                                >  2:780379/1‑140 (MQ=255)                                  aTCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTaaa                                                                                                <  2:1019437/140‑1 (MQ=255)                                  aTCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTaaa                                                                                                <  1:1333062/140‑1 (MQ=255)                                     gATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAg                                                                                             <  2:91669/140‑1 (MQ=255)                                     gATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAg                                                                                             <  2:740383/140‑1 (MQ=255)                                      aTACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGc                                                                                            >  1:940423/1‑140 (MQ=255)                                        aCAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcac                                                                                          <  2:23188/140‑1 (MQ=255)                                         cAGCATAAAGAAAGCTGGGCCAGG‑AAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcacca                                                                                        <  1:1059010/140‑1 (MQ=255)                                          aGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcacca                                                                                        <  2:471920/140‑1 (MQ=255)                                          aGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcacca                                                                                        <  1:269519/140‑1 (MQ=255)                                            cATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      >  2:1333261/1‑140 (MQ=255)                                            cATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      >  2:15548/1‑140 (MQ=255)                                            cATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      >  2:548486/1‑140 (MQ=255)                                            cATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      >  2:678130/1‑140 (MQ=255)                                            cATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCATTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      >  2:229591/1‑140 (MQ=255)                                                 agaaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATc                                                                                 >  1:204692/1‑140 (MQ=255)                                                 agaaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATc                                                                                 >  1:287086/1‑140 (MQ=255)                                                   aaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGa                                                                               <  2:255949/140‑1 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGTCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAgg                                                                            >  1:353737/1‑140 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcacca                                                                                        <  1:48914/128‑1 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcacca                                                                                        >  2:48914/1‑128 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAgg                                                                            >  1:523499/1‑140 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAgg                                                                            >  2:257362/1‑140 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAgg                                                                            >  2:412188/1‑140 (MQ=255)                                                      gCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCATTTCCGCCGGCAAATGACATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGAACCACTGTATCGAAgg                                                                            >  2:954931/1‑140 (MQ=255)                                                       cTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAggg                                                                           >  1:74856/1‑140 (MQ=255)                                                       cTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAggg                                                                           >  1:768633/1‑140 (MQ=255)                                                         gggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGc                                                                         <  2:204692/140‑1 (MQ=255)                                                          ggCCAGGAAAAAATAACGGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      <  2:536249/126‑1 (MQ=255)                                                          ggCCAGGAAAAAATAACGGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACt                                                                                      >  1:536249/1‑126 (MQ=255)                                                          ggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGcc                                                                        >  1:89165/1‑140 (MQ=255)                                                          ggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGcc                                                                        >  2:1054231/1‑140 (MQ=255)                                                          ggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGc                                                                         >  2:79093/1‑139 (MQ=255)                                                          ggCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGc                                                                         <  1:79093/139‑1 (MQ=255)                                                           gCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCa                                                                       <  2:1092525/140‑1 (MQ=255)                                                           gCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCa                                                                       >  1:1092525/1‑140 (MQ=255)                                                            ccAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAg                                                                      >  2:88896/1‑140 (MQ=255)                                                             cAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGc                                                                     <  1:54111/140‑1 (MQ=255)                                                                  aaaaaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGa                                                                <  1:1169537/140‑1 (MQ=255)                                                                  aaaaaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGa                                                                <  1:257362/140‑1 (MQ=255)                                                                      aTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggg                                                            <  2:940423/140‑1 (MQ=255)                                                                      aTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggg                                                            <  2:901881/140‑1 (MQ=255)                                                                      aTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggg                                                            <  2:419569/140‑1 (MQ=255)                                                                      aTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggg                                                            <  1:88896/140‑1 (MQ=255)                                                                       tAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATgggg                                                           <  2:89165/140‑1 (MQ=255)                                                                        aaCAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggggg                                                          <  2:768633/140‑1 (MQ=255)                                                                        aaCAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggggg                                                          <  2:74856/140‑1 (MQ=255)                                                                          cAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggg                                                            <  2:1288553/136‑1 (MQ=255)                                                                          cAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATggg                                                            >  1:1288553/1‑136 (MQ=255)                                                                               aTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTgg                                                   >  2:987148/1‑140 (MQ=255)                                                                               aTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTgg                                                   >  2:1075766/1‑140 (MQ=255)                                                                                tCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATgggg                                                           >  2:441158/1‑131 (MQ=255)                                                                                tCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATgggg                                                           <  1:441158/131‑1 (MQ=255)                                                                                   aGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATg                                               <  2:287086/140‑1 (MQ=255)                                                                                           gggAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAg                                       <  2:751582/140‑1 (MQ=255)                                                                                              aaaaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTc                                    <  1:1333261/140‑1 (MQ=255)                                                                                               aaaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCa                                   <  2:597169/140‑1 (MQ=255)                                                                                                aaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAg                                  >  2:720712/1‑140 (MQ=255)                                                                                                aaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAg                                  >  2:464257/1‑140 (MQ=255)                                                                                                aaTCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAg                                  <  1:1054231/140‑1 (MQ=255)                                                                                                  tCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGcc                                >  1:1131070/1‑140 (MQ=255)                                                                                                     gCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGCGCCTGGAATGGACGAAAGTTCAGCCGta                             >  1:1201077/1‑140 (MQ=255)                                                                                                                   gagaTGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTa               <  2:523499/140‑1 (MQ=255)                                                                                                                    agaTGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAg              <  1:678130/140‑1 (MQ=255)                                                                                                                      aTGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGAc            <  1:720712/140‑1 (MQ=255)                                                                                                                      aTGCCCTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGAc            <  1:942595/140‑1 (MQ=255)                                                                                                                           cTTTCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACa       <  1:548486/140‑1 (MQ=255)                                                                                                                              tCCGGCGGCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGt    >  1:565446/1‑140 (MQ=255)                                                                                                                                cggcggCAAATGGCGTCATGGTAAATCAGTTATAGTTAATGTTAAAATGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGGCCAACATGTCa  <  2:673227/140‑1 (MQ=255)                                                                                                                                cggcggCAAATGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCa  <  2:1201077/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                  TCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTTCCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCA  >  NC_000913/747769‑748035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑