Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,121	0	C	A	23.6%	229.0 / 15.6	90	intergenic (‑326/+64)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base C (51/17);  new base A (0/21);  total (51/39)
Fisher's exact test for biased strand distribution p-value = 2.21e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCA  >  NC_000913/752983‑753258                                                                                                                                           |                                                                                                                                          aTAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCa                                                                                                                                          >  1:490657/1‑140 (MQ=255)    gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCatat                                                                                                                                       <  2:507633/140‑1 (MQ=255)       ttATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaa                                                                                                                                    >  1:1601977/1‑140 (MQ=255)         ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaaaa                                                                                                                                  >  2:456229/1‑140 (MQ=255)         ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaaaa                                                                                                                                  >  1:1202817/1‑140 (MQ=255)          taAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAAt                                                                                                                                 >  1:241257/1‑140 (MQ=255)           aaaTGCGTCTACCATGAATTTTTTAATTAAAGGTTTTGGTTTGCTAATATTTTGAGTTTTTCTTTTTTTTTAAAATATCTATATAGGTGTTTTAATGGTTTTTATTTTTAAATTTTTTTGTGTTTAGGCATATAAAAAta                                                                                                                                <  2:1546183/140‑2 (MQ=255)              tGCGACTTCCATGAAGTTTTTAATAGAAAGTTTTGGGTTGTTAATAATTTGAGCTTTTCTTTTCTTTTTAAATATCTATATGGGTCTGTTAATGGTTTTTTTTTTTACATTTTTTTGTGTTTAGGAAAAAAAAAATCAAc                                                                                                                             <  2:1018430/140‑1 (MQ=255)               gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCatat                                                                                                                                       >  1:219613/1‑129 (MQ=255)               gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCatat                                                                                                                                       <  2:219613/129‑1 (MQ=255)               gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                            >  1:1181054/1‑140 (MQ=255)               gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                            >  1:97830/1‑140 (MQ=255)               gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                            >  1:1528928/1‑140 (MQ=255)               gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTAAATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                            >  1:1562545/1‑140 (MQ=255)                cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                           >  1:1378654/1‑140 (MQ=255)                 gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                          >  2:1036862/1‑140 (MQ=255)                 gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                          >  1:192676/1‑140 (MQ=255)                 gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                          >  2:602037/1‑140 (MQ=255)                   ttACCATGAATTTTTTAATTGAAATTATTGGTTTGTTGATAATTTGAGTTGTTTTTTTTTTTTTAAATATCTATATAGGTTTGTTAATGGTTTTTATTTTTACATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGcc                                                                                                                        <  2:217940/139‑1 (MQ=255)                             ttttttAATTGAAAGTTTTGGGTGGCTGATAATTTGAGTTTTTCTTTTTTTTTTAAATATCTATATAGGTTTGTTAATGATTTTTATTTTTAAAATTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAAcgg                                                                                                              <  2:358595/139‑1 (MQ=255)                             gTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAAcgg                                                                                                              <  1:234057/140‑1 (MQ=255)                              tttttAATTGAATTTATTGGGTTGGTAATATTTTGGGTTTTTATTTTTTTTTTAAATATAAATTTAGGTATATTATGGTATTTTTTTTTAACAATTTTTTGTATTTGGGAAAATAAAAAGAAACCCGCCATATGAAcggc                                                                                                             <  2:1443668/140‑1 (MQ=255)                              tttttAATTGAAAGTATTGGGTTGTTGATAATTTGAGTTTTTCTTTTTTTTTTAAATTTCTATATAGTTTTTTTAATGGATTTTTTTTTTACAATTTTTTGTTTTTAGGAATAAAAAAATCAACCCGCCATATGAAcggc                                                                                                             <  2:258024/140‑1 (MQ=255)                                 ttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCggg                                                                                                          >  2:1676055/1‑140 (MQ=255)                                 ttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCggg                                                                                                          >  1:233694/1‑140 (MQ=255)                                      taaaaGTATTGGGTTGCTGATAATTTGAGTTTTTTTTTTTTTTTTAAATATCTATATAGGTCTTTTAATGGTTTTTATTTTTACATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTaaa                                                                                                     <  2:1378654/138‑1 (MQ=255)                                      tGAAAGTATTGGGTTGCTGATAATTTGAGCTTTTTTTTTTTTTTTAAATATCTATATAGGTTTTTTAATGGTTTTTTTTTTTACATTTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGTGGGTTaaa                                                                                                     <  2:1219130/140‑1 (MQ=255)                                          aGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGTGGGTTAAAatat                                                                                                 >  1:1219130/1‑140 (MQ=255)                                             tttGGTTTGCTGATATTTTGGGTTTTTTTTTTTTTTTTAAATATTTATATAGTTTTTTTAATGGTTTTTTTTTTTAAATTTTTTTGTTTTTAGGAAAAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                              <  2:165903/139‑1 (MQ=255)                                             aTTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                              <  2:241257/140‑1 (MQ=255)                                                    tGCTAATATTTTGAGCTTTTTTTTTTTTTTTAAATATTTATATAGTTTTTTAAATGTTTTTTTTTTTTACATTTTTTTTTTTTTAGAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTa                                                                                       <  2:860300/140‑1 (MQ=255)                                                      cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                     >  1:322422/1‑140 (MQ=255)                                                      cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                                     >  1:1482651/1‑140 (MQ=255)                                                      cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGc                                                                                     >  1:1535684/1‑140 (MQ=255)                                                          tAATTTGAGTTTTTTTTTTTTTTTTAAATATTTTTATAGGTTTTTTAATGGTTTTTTTTTTTACATTTTTTTGTTTTAAGGCATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATc                                                                                 <  2:1196108/140‑1 (MQ=255)                                                                 agttGTTTTTTTTTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACATTTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAtt                                                                          <  1:1036862/137‑1 (MQ=255)                                                                 aGCTTTTTTTTTTTTTTTAAATATTTATATAGGTCTTTTAATGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAtt                                                                          <  2:490657/140‑1 (MQ=255)                                                                   cTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTATAATTTAGCAATCAAACATTaa                                                                        >  2:573154/1‑140 (MQ=255)                                                                       tttttttttttaAAATATTTATATAGGTCTTTTAATGTTTTTTTTTTTTAAATTTTTTTGTTTTTAGATATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCt                                                                    <  2:817775/133‑1 (MQ=255)                                                                           ttCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGat                                                                <  1:568101/140‑1 (MQ=255)                                                                             ttttttAAATATTTATATAGGTTTGTTAATGATTTTTATTTTTAAATTTTTTTGTTTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                              <  2:552497/139‑1 (MQ=255)                                                                             ttttttAAATATCTATATGGGTCTGTTAATGGTTTTTTTTTTTACAATTTTTTGTTTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                              <  2:1181054/139‑1 (MQ=255)                                                                             tttttaAAATATTTATATAGGTTTGTTAATGGTTTTTTTTTTTAAAATTTTTTGTTTTTAGCCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                              <  2:1528928/139‑1 (MQ=255)                                                                              tttttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTTTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATc                                                             <  1:620773/140‑1 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCAACTTAGCAATCAAACATTAATGCTTGATATCGc                                                           >  1:1587802/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTTGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:1118744/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:84827/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:552497/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:216319/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  2:1417994/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:1490626/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:225747/1‑140 (MQ=255)                                                                                tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                           >  1:1409754/1‑140 (MQ=255)                                                                                     atatCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTa                                                      >  1:1310961/1‑140 (MQ=255)                                                                                        tCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATTGCTTTTAAAg                                                   >  1:636260/1‑140 (MQ=255)                                                                                        tCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAg                                                   >  1:555467/1‑140 (MQ=255)                                                                                              taGGTTTGTTAATGTTTTTTATTTTTACATTTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                             <  2:1335832/140‑1 (MQ=255)                                                                                              taGGTCTGTTAATGTATTTTTTTTTTACATTTTTTTGTTTTTAGAAAAAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                             <  2:65509/140‑1 (MQ=255)                                                                                                 gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCTCTTTTAAAGTCGCGtttt                                          >  1:1463161/1‑140 (MQ=255)                                                                                                 gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGtttt                                          >  2:509590/1‑140 (MQ=255)                                                                                                 gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                          >  1:806283/1‑140 (MQ=255)                                                                                                 gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                          >  2:305210/1‑140 (MQ=255)                                                                                                  tCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttttt                                         >  1:1037353/1‑140 (MQ=255)                                                                                                   cTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                        <  1:456229/140‑1 (MQ=255)                                                                                                    tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                       >  1:110700/1‑140 (MQ=255)                                                                                                    tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                       >  2:1716090/1‑140 (MQ=255)                                                                                                    tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                       >  1:890816/1‑140 (MQ=255)                                                                                                    tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                       >  1:1525511/1‑140 (MQ=255)                                                                                                    tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACCCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                       >  1:787845/1‑140 (MQ=255)                                                                                                     tttAATGGTTTTTTTTTTTAAAATTTTTTGTTTTTAGGAATAAAAAAACCAACCCGCCATATGAACGGCTGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                      <  2:504820/139‑1 (MQ=255)                                                                                                     tttAATGGTTTTTATTTTTAAATTTTTTTGTTTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                      <  2:49102/139‑1 (MQ=255)                                                                                                     gtaaaTGGATTTTATTTTTAAAATTTTTTGTTTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                      <  1:910606/137‑1 (MQ=255)                                                                                                     gTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                      <  1:305210/140‑1 (MQ=255)                                                                                                      ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                     >  2:399162/1‑140 (MQ=255)                                                                                                      ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAAACATTAACGCTTGATAACGCTTTTAAAGTCACGGTTTTtata                                     >  2:342201/1‑140 (MQ=255)                                                                                                       tAATGGATTTTTTTTTTAAATTTTTTTGTGTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCatat                                    <  1:357839/140‑1 (MQ=255)                                                                                                        attGGTTTTTTTTTTTATATTTTTTTGTGTTTAGAAATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                   <  2:787845/138‑1 (MQ=255)                                                                                                        aatgttttttttttttAAAATTTTTTGTTTTTAGGAATATAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                   <  2:484881/134‑1 (MQ=255)                                                                                                        aatgttttttattttTAAATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                   <  2:555467/134‑1 (MQ=255)                                                                                                        aaTGTATTTTATTTTTACAATTTTTTGTTTTTAGAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                   <  2:110700/140‑1 (MQ=255)                                                                                                        aaTGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGCAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                   <  2:911939/140‑1 (MQ=255)                                                                                                        aaTGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGAATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                   <  2:636260/140‑1 (MQ=255)                                                                                                          tgatttttattttTACAATTTTTTGTTTTTAGGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCt                                 <  2:1562545/136‑1 (MQ=255)                                                                                                          tGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCt                                 <  2:97830/140‑1 (MQ=255)                                                                                                          agatttttattttTACAATTTTTTTTTTTTAGGCAAAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAGCGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCt                                 <  2:1601977/136‑1 (MQ=255)                                                                                                           ggtttttttttttAAATTTTTTTGTTTTAACAAAAATAAAATCGATCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                <  2:1535684/137‑1 (MQ=255)                                                                                                           ggtttttattttTAAATTTTTTTGTGTTTAGGAATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                <  2:322422/137‑1 (MQ=255)                                                                                                           ggATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                >  2:413464/1‑140 (MQ=255)                                                                                                             tttttttttttAAATTTTTTTGTTTTTAGGCATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                              <  2:1310961/139‑1 (MQ=255)                                                                                                               tttattttTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGtata                            <  1:1417994/140‑1 (MQ=255)                                                                                                                ttattttTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                           >  1:507289/1‑140 (MQ=255)                                                                                                                      ttACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGa                     >  1:1521897/1‑140 (MQ=255)                                                                                                                       tACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAGTCGCGTTTTTCATATCCTGTATACAGCTGAc                    >  1:1648104/1‑140 (MQ=255)                                                                                                                       tACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAc                    >  1:1609352/1‑140 (MQ=255)                                                                                                                                ttGTGTTTAGAAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACggg           <  1:629679/140‑1 (MQ=255)                                                                                                                                 tgttTTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc          <  2:1037353/140‑1 (MQ=255)                                                                                                                                  tttttaaGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa         <  2:1551549/134‑1 (MQ=255)                                                                                                                                   tttttAGGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTAACGCGGACGGGCaa        <  2:462264/138‑1 (MQ=255)                                                                                                                                      ttAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATTGCTTTTTAAATCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCt     >  2:252956/1‑140 (MQ=255)                                                                                                                                         ggCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCa  <  1:413464/140‑1 (MQ=255)                                                                                                                                           |                                                                                                                                          ATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCA  >  NC_000913/752983‑753258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑