| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,954,607 | C→A | A801S (GCG→TCG) | torZ ← | trimethylamine N‑oxide reductase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,954,607 | 0 | C | A | 99.2% | 402.6 / ‑3.1 | 117 | A801S (GCG→TCG) | torZ | trimethylamine N‑oxide reductase 2 |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (72/44); total (72/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.29e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
TGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGCCGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTACACAAGCCA > NC_000913/1954470‑1954740 | tGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAacgacg > 1:366109/1‑140 (MQ=255)tGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAacgacg > 2:235588/1‑140 (MQ=255) gCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGt > 2:1550348/1‑140 (MQ=255) cTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGtt > 1:109857/1‑140 (MQ=255) cTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGt < 1:993085/139‑1 (MQ=255) aaTTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTaa < 1:86438/140‑1 (MQ=255) tCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACtt < 2:1580762/140‑1 (MQ=255) tCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACtt < 2:180964/140‑1 (MQ=255) aaTATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCg < 2:1082434/140‑1 (MQ=255) aaTATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCg < 2:275779/140‑1 (MQ=255) tatatTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGt > 1:1520366/1‑140 (MQ=255) atatTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTg < 2:689721/140‑1 (MQ=255) atatTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTg < 2:884104/140‑1 (MQ=255) ttGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCAt > 1:299051/1‑140 (MQ=255) tGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCAtt > 2:1088676/1‑140 (MQ=255) tGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCAtt > 1:256125/1‑140 (MQ=255) tGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCAt > 2:709891/1‑139 (MQ=255) tGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCAt < 1:709891/139‑1 (MQ=255) aCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGta > 2:1466529/1‑140 (MQ=255) aCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGta > 2:1702807/1‑140 (MQ=255) aCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGta > 1:944201/1‑140 (MQ=255) tGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑tt > 2:1573431/1‑140 (MQ=255) gTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑ttt > 1:1625603/1‑140 (MQ=255) gTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑ttt > 1:1261196/1‑140 (MQ=255) gTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑ttt > 1:119039/1‑140 (MQ=255) aGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑ttttt < 1:1001329/140‑1 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCTTAACCTCAGCGCCCGTTTCCGGGCGCTATTAACGTCTTACGCCTGACCAGCTGGCTGATCAAACGACGTTAACTTCGGTGAATTGCCCGTATA‑TTTTTc > 2:1708652/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑tttt < 2:701049/138‑1 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑tttt > 1:701049/1‑138 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTc > 2:1688714/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTc > 1:145442/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTc > 2:1212222/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTc > 2:340253/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTc > 1:866223/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTc > 2:93785/1‑140 (MQ=255) ggCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCATATA‑TTTTTc > 2:386130/1‑140 (MQ=255) gCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCg > 2:182671/1‑140 (MQ=255) ccTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGa > 2:171818/1‑140 (MQ=255) ccTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGa > 2:1303420/1‑140 (MQ=255) ccTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGa > 2:186456/1‑140 (MQ=255) ccTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGa > 1:100820/1‑140 (MQ=255) ccTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGa > 1:641583/1‑140 (MQ=255) cTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGat < 2:883856/140‑1 (MQ=255) tGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGata < 2:690408/140‑1 (MQ=255) tGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGata < 2:1098401/140‑1 (MQ=255) aTAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGAtata > 1:824893/1‑140 (MQ=255) aTAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGAtata > 1:1356864/1‑140 (MQ=255) aTAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGAtata > 2:1588753/1‑140 (MQ=255) aTAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGAtata > 2:1273540/1‑140 (MQ=255) aTAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGAtata > 1:536192/1‑140 (MQ=255) aTAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGAtata > 1:739487/1‑140 (MQ=255) aGCATAGCGCATCAGGCAGCTTTACGTTTGCAAAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATacac < 1:1091103/140‑1 (MQ=255) aGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTGTCGATATACACCAACg < 1:788841/140‑1 (MQ=255) cgcATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCt > 1:504022/1‑140 (MQ=255) cATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGa > 2:1094530/1‑140 (MQ=255) cAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGtt > 2:1591569/1‑140 (MQ=255) cAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGtt > 2:1317637/1‑140 (MQ=255) ggCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTAc < 1:1173929/140‑1 (MQ=255) cTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGca < 1:1657436/140‑1 (MQ=255) cTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGca < 2:852718/140‑1 (MQ=255) cTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGca < 1:1273540/140‑1 (MQ=255) gTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAggaa > 1:849052/1‑138 (MQ=255) gTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCa < 2:1165359/140‑1 (MQ=255) cgtCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACATCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCt < 2:297049/138‑1 (MQ=255) ccTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCt < 1:601369/140‑1 (MQ=255) cTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTg < 1:186456/140‑1 (MQ=255) aGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGa > 2:598733/1‑140 (MQ=255) gcgcCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAg < 2:1402122/140‑1 (MQ=255) cccGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAAC‑TCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTgg > 1:113362/1‑140 (MQ=255) cGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTggg > 2:1666709/1‑140 (MQ=255) gTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTgggg < 1:1702807/140‑1 (MQ=255) tttCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGa > 2:1362621/1‑140 (MQ=255) gggCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATCCGCCAACGCTGAGTTACCGGCACAGGCTTTTCCCAGCTGCAAGCTGGGGATTTcc < 2:1520366/140‑1 (MQ=255) gggCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATcc < 1:13797/140‑1 (MQ=255) ggCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATccg < 1:1022980/140‑1 (MQ=255) ggCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATccg > 1:1472433/1‑140 (MQ=255) ggCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGAATATccg < 1:1466529/140‑1 (MQ=255) aTTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAAC‑TCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTaa < 2:113362/140‑1 (MQ=255) gTCTTACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGTTGGGGATATCCGCCGTTAACACGt > 1:1568749/1‑140 (MQ=255) ttACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGTTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCg > 1:525973/1‑140 (MQ=255) ttACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTaa < 1:1123985/132‑1 (MQ=255) ttACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTaa > 2:1123985/1‑132 (MQ=255) ttACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGtt > 2:601631/1‑138 (MQ=255) ttACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCg > 1:1170677/1‑140 (MQ=255) ttACGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCg > 1:1080981/1‑140 (MQ=255) aCGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATATTTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGc < 2:487308/140‑1 (MQ=255) aCGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCa < 1:350477/140‑1 (MQ=255) cGCCTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCAc < 1:1666709/140‑1 (MQ=255) ttGAACAGTTGGCTGATCAAACGACGTTAACTTCGGTGCTTTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGAATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGc < 2:256125/139‑1 (MQ=255) cTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACCCCAACGCGGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGc < 2:129195/140‑1 (MQ=255) cTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGc < 2:536192/140‑1 (MQ=255) cTGAACAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGc < 2:1131374/140‑1 (MQ=255) aaCAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGt > 1:1168167/1‑140 (MQ=255) aaCAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGt > 2:1191122/1‑140 (MQ=255) aaCAGCTGGCTGATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGt > 1:684138/1‑140 (MQ=255) ggctgATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTaca < 2:119039/140‑1 (MQ=255) gctgATCAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTacac < 1:221090/140‑1 (MQ=255) cAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTACACAAGCCa < 2:641583/140‑1 (MQ=255) cAAACGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTACACAAGCCa < 1:334766/140‑1 (MQ=255) aaaaCGACGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATCCACCAACGCTGATTTCCCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTACACAAGCCa < 2:462012/139‑1 (MQ=255) | TGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGCTGATCAAACGCCGTTAACTTCGGTGCATTGCCCGTATA‑TTTTTCGATATACACCAACGCTGAGTTACCGGCACAGGCATTTGCCAGCTGCGAGCTGGGGATATCCGCCGTTAACACGTTCGCACTGCCGTTTTTACACAAGCCA > NC_000913/1954470‑1954740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |