| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 533,562 | Δ2 bp | coding (552‑553/816 nt) | allR → | DNA‑binding transcriptional repressor AllR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 533,562 | 0 | T | . | 100.0% | 478.6 / NA | 108 | coding (552/816 nt) | allR | DNA‑binding transcriptional repressor AllR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (43/65); total (43/65) | |||||||||||
| * | NC_000913 | 533,563 | 0 | A | . | 100.0% | 478.6 / NA | 108 | coding (553/816 nt) | allR | DNA‑binding transcriptional repressor AllR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (43/65); total (43/65) | |||||||||||
Only 100 of 108 total aligned reads displayed.
GATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTA > NC_000913/533430‑533692 || gATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTtgtg > 2:1993305/1‑140 (MQ=255) aTGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTgg < 1:897270/140‑1 (MQ=255) tgtgtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGa < 2:957826/140‑1 (MQ=255) tgtgtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGa < 2:760346/140‑1 (MQ=255) tgtgtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGa < 2:1974974/140‑1 (MQ=255) tgtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGata > 1:1895335/1‑140 (MQ=255) gtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGatat > 2:557923/1‑140 (MQ=255) gtgCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGatat > 2:1150284/1‑140 (MQ=255) ccACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCa < 2:338011/140‑1 (MQ=255) ccACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCa > 2:1823848/1‑140 (MQ=255) ccACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCa > 2:1513586/1‑140 (MQ=255) aCTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCAcc < 2:1492153/140‑1 (MQ=255) aCTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCAcc < 1:1943210/140‑1 (MQ=255) aGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGa < 1:1025178/140‑1 (MQ=255) aGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGa < 1:1261426/140‑1 (MQ=255) gtcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGaa < 2:1611209/140‑1 (MQ=255) tcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAg > 1:501563/1‑140 (MQ=255) tcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAg > 2:1180387/1‑140 (MQ=255) tcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAg > 1:1070265/1‑140 (MQ=255) tcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAg > 1:1834264/1‑140 (MQ=255) gtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGa > 2:1319451/1‑140 (MQ=255) tGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCt > 1:1747649/1‑140 (MQ=255) tGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCt > 2:556921/1‑140 (MQ=255) ccACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTgg > 2:1843525/1‑140 (MQ=255) cTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAAc > 2:638998/1‑140 (MQ=255) gCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAgcgc < 2:1799817/140‑1 (MQ=255) cTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGcgcg < 2:1123778/140‑1 (MQ=255) ttCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGt > 1:1485965/1‑140 (MQ=255) tCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTg < 1:557923/140‑1 (MQ=255) tCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTg < 1:1150284/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 2:1747649/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 1:1180387/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 1:1804817/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 1:36336/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 1:341207/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 2:1764133/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 1:307245/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 2:1485965/140‑1 (MQ=255) cGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGaa < 2:80101/140‑1 (MQ=255) tGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAGGCGCGTGAACTg < 2:501563/140‑1 (MQ=255) tGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTg < 1:1677793/140‑1 (MQ=255) cGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTggg < 1:638998/140‑1 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTggg > 1:653118/1‑138 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTggg < 2:653118/138‑1 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCt < 2:838865/140‑1 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCt > 1:279754/1‑140 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCt > 1:1761123/1‑140 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCt > 1:1560409/1‑140 (MQ=255) ggCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCt > 1:1557138/1‑140 (MQ=255) aGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATAcc < 2:127660/140‑1 (MQ=255) aGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATAcc < 2:1037877/140‑1 (MQ=255) aGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATAcc < 2:1557138/140‑1 (MQ=255) cgcTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGt < 1:1112429/140‑1 (MQ=255) cgcTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGt < 2:1066070/140‑1 (MQ=255) cgcTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGt < 2:915606/140‑1 (MQ=255) tgctTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGa > 1:1453515/1‑140 (MQ=255) ttATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATaaa < 2:667081/140‑1 (MQ=255) tATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAaag > 1:1798423/1‑140 (MQ=255) tCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAaagaa < 2:1895335/140‑1 (MQ=255) tCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAaagaa < 1:1319451/140‑1 (MQ=255) tCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAaagaa < 1:710520/140‑1 (MQ=255) gCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAagag < 2:1421310/140‑1 (MQ=255) gCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAagag < 2:557034/140‑1 (MQ=255) gCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAagag < 1:1843525/140‑1 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGt > 2:1363951/1‑125 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGt < 1:1363951/125‑1 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCa < 2:1834264/140‑1 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCa < 2:815571/140‑1 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCa < 2:1453515/140‑1 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCa > 1:39368/1‑140 (MQ=255) tGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCa > 1:1481416/1‑140 (MQ=255) gAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAGC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATGCCGTAGATAAAGAAGAGCAtgttg < 1:41670/140‑1 (MQ=255) gAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCAtgttg < 1:556921/140‑1 (MQ=255) ggagTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGt < 2:1620058/140‑1 (MQ=255) ggagTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGt < 1:1810433/140‑1 (MQ=255) ggagTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGt < 1:1978482/140‑1 (MQ=255) ggagTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGt < 2:32573/140‑1 (MQ=255) ttGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGa < 1:1993305/140‑1 (MQ=255) gatgaGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAAt > 1:1325339/1‑140 (MQ=255) gatgaGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAAt > 2:1094697/1‑140 (MQ=255) tgaGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTg > 1:35395/1‑140 (MQ=255) gaGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGc < 2:1761123/140‑1 (MQ=255) gCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCAt > 1:698128/1‑140 (MQ=255) gCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCAt > 2:478970/1‑140 (MQ=255) ttCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTc > 2:1576160/1‑140 (MQ=255) ttCTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTc > 2:1508398/1‑140 (MQ=255) cTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAg < 1:512967/140‑1 (MQ=255) cTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAg < 1:1912045/140‑1 (MQ=255) cTGCAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAg < 2:1560409/140‑1 (MQ=255) cAAACCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCaa > 1:899044/1‑140 (MQ=255) aCCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAAttt > 1:1178677/1‑140 (MQ=255) aCCGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAAttt > 2:510489/1‑140 (MQ=255) cGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTAc > 2:1535232/1‑140 (MQ=255) cGGTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTAc > 2:224379/1‑140 (MQ=255) ggTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACg < 1:500773/140‑1 (MQ=255) ggTTTGCAGCAGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACg < 1:301642/140‑1 (MQ=255) gcagcaGTTTACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACgatgat < 1:946974/140‑1 (MQ=255) tttACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACg < 1:2063718/128‑1 (MQ=255) tttACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACg > 2:2063718/1‑128 (MQ=255) tttACGCCAAC‑‑CGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTa < 1:1508398/140‑1 (MQ=255) || GATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTA > NC_000913/533430‑533692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |