Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 772,671 C→A A405E (GCG→GAG)  cydA → cytochrome bd‑I ubiquinol oxidase subunit I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913772,6710CA98.5% 231.0 / ‑2.9 67A405E (GCG→GAG) cydAcytochrome bd‑I ubiquinol oxidase subunit I
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base A (33/33);  total (34/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01

CTATACGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATG  >  NC_000913/772534‑772796
                                                                                                                                           |                                                                                                                             
cTATACGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑gagc                                                                                                                             <  1:798137/140‑1 (MQ=255)
  ataCGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctc                                                                                                                           <  2:1240879/140‑1 (MQ=255)
  ataCGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctc                                                                                                                           <  1:1171876/140‑1 (MQ=255)
  ataCGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctc                                                                                                                           >  1:305106/1‑140 (MQ=255)
  ataCGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctc                                                                                                                           <  2:512879/140‑1 (MQ=255)
   taCGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctct                                                                                                                          <  1:662221/140‑1 (MQ=255)
    aCGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctctc                                                                                                                         <  1:748812/140‑1 (MQ=255)
     cGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGctctct                                                                                                                        <  1:214405/140‑1 (MQ=255)
        cAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTc                                                                                                                     >  1:911707/1‑140 (MQ=255)
          aaCGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTg                                                                                                                   <  1:790362/140‑1 (MQ=255)
          aaCGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTg                                                                                                                   >  2:790362/1‑140 (MQ=255)
           aCGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTgg                                                                                                                  >  1:971127/1‑140 (MQ=255)
           aCGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTgg                                                                                                                  >  1:514218/1‑140 (MQ=255)
           aCGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTAGCAATCATC‑‑GAGCTCTCTTTCTgg                                                                                                                  >  2:1190729/1‑140 (MQ=255)
             gTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAg                                                                                                                >  1:1274143/1‑140 (MQ=255)
                gCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAgtgt                                                                                                             >  2:888545/1‑140 (MQ=255)
                         aCTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCaa                                                                                                    <  2:971127/140‑1 (MQ=255)
                                        cAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGaa                                                                                     >  1:422169/1‑140 (MQ=255)
                                        cAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGaa                                                                                     >  1:575074/1‑140 (MQ=255)
                                         aaCAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGaaa                                                                                    >  2:398779/1‑140 (MQ=255)
                                               cAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATgg                                                                              >  2:194016/1‑140 (MQ=255)
                                               cAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATgg                                                                              >  1:133295/1‑140 (MQ=255)
                                                aaCCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGc                                                                             >  1:344237/1‑140 (MQ=255)
                                                   cAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTc                                                                          >  1:1211868/1‑140 (MQ=255)
                                                   cAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTc                                                                          >  1:537904/1‑140 (MQ=255)
                                                          tCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTgcgcgc                                                                   >  2:713921/1‑140 (MQ=255)
                                                            cATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccg                                                                 <  2:537904/140‑1 (MQ=255)
                                                            cATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccg                                                                 >  2:1322163/1‑140 (MQ=255)
                                                            cATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccg                                                                 >  2:305141/1‑140 (MQ=255)
                                                            cATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccg                                                                 >  1:813737/1‑140 (MQ=255)
                                                            cATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccg                                                                 >  1:727433/1‑140 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  1:888545/140‑1 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  1:460222/140‑1 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  1:247199/140‑1 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  2:899405/140‑1 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  1:576319/140‑1 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  2:1221995/140‑1 (MQ=255)
                                                              tCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTCTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGcgcgccgcg                                                               <  1:305141/140‑1 (MQ=255)
                                                                   cgTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTa                                                          <  2:514218/140‑1 (MQ=255)
                                                                   cgTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTa                                                          <  1:713921/140‑1 (MQ=255)
                                                                   cgTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTa                                                          <  2:1297032/140‑1 (MQ=255)
                                                                   cgTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTa                                                          >  1:787960/1‑140 (MQ=255)
                                                                   cgTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTa                                                          >  2:495572/1‑140 (MQ=255)
                                                                   cgTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTa                                                          >  1:355479/1‑140 (MQ=255)
                                                                             cgcTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCg                                                <  2:305106/140‑1 (MQ=255)
                                                                             cgcTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCg                                                <  2:1184751/140‑1 (MQ=255)
                                                                              gcTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGc                                               >  2:306066/1‑140 (MQ=255)
                                                                                    cTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGt                                         >  2:1288151/1‑140 (MQ=255)
                                                                                       tGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATCGAGCTCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTg                                        >  2:637124/1‑140 (MQ=255)
                                                                                       tGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGa                                      >  2:212342/1‑140 (MQ=255)
                                                                                        gCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGAt                                     <  2:1211868/140‑1 (MQ=255)
                                                                                        gCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGAt                                     <  2:813737/140‑1 (MQ=255)
                                                                                        gCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGAt                                     <  1:828047/140‑1 (MQ=255)
                                                                                        gCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGAt                                     <  1:586170/140‑1 (MQ=255)
                                                                                          gTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTg                                   <  1:495572/140‑1 (MQ=255)
                                                                                            tCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCt                                 >  2:259687/1‑140 (MQ=255)
                                                                                            tCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCt                                 >  1:225982/1‑140 (MQ=255)
                                                                                                tATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAg                             <  2:422169/140‑1 (MQ=255)
                                                                                                tATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAg                             <  2:575074/140‑1 (MQ=255)
                                                                                                        tggCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGc                     <  2:225982/140‑1 (MQ=255)
                                                                                                        tggCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGc                     >  1:410315/1‑140 (MQ=255)
                                                                                                          gCGTGTGGCTTCCTGCTTCTGTCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCGGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTg                   >  2:1108758/1‑140 (MQ=255)
                                                                                                          gCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTg                   >  2:695569/1‑140 (MQ=255)
                                                                                                          gCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTg                   >  2:81100/1‑140 (MQ=255)
                                                                                                             tgtgGCTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGtt                >  1:706093/1‑140 (MQ=255)
                                                                                                                ggCTTCCTGCTTCTGGCAATCATC‑‑GAGCGCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGt             <  2:911707/140‑1 (MQ=255)
                                                                                                                  cTTCCTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTgg           <  2:787960/140‑1 (MQ=255)
                                                                                                                     ccTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTg        >  2:1054985/1‑140 (MQ=255)
                                                                                                                     ccTGCTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTg        >  1:1194498/1‑140 (MQ=255)
                                                                                                                         cTTCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAata    <  2:772309/140‑1 (MQ=255)
                                                                                                                           tCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATg  <  2:1194498/140‑1 (MQ=255)
                                                                                                                           tCTGGCAATCATC‑‑GAGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATg  <  2:933621/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                             
CTATACGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATC‑‑GCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATG  >  NC_000913/772534‑772796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: