| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,825,061 | 0 | G | A | 35.6% | 88.5 / 30.4 | 59 | intergenic (‑124/+79) | ves/spy | HutD family protein Ves/ATP‑independent periplasmic chaperone |
| Reads supporting (aligned to +/- strand): ref base G (37/1); new base A (0/21); total (37/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.24e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTC > NC_000913/1824929‑1825197 | tttttCCATCCTCCCCCCCGGCCCTTTTTTTTCTTTTTTATCGTTCAGGTACCC‑GTGGTTGTTTATCGGCAACTGGGGTGTTTTACGTTAGTGGTGATCGGGTTTTTTTTACAAC‑TGTTTGAGAAGAAAAAAAAAAA‑‑ccg < 2:571227/137‑1 (MQ=255)ttATCCCATCCTCGCTCCCGGCCCTTTTTTTTCATTTTTATCTTTCAGGTAACC‑GTGGATGGTTACCGCAAACTGGGGTGATTTACGTTAGTGGTGATCAGTTTTTTTTAACAAC‑TGTTGGAGAAGAAAAAAAAAAA‑‑ccg < 2:328616/139‑1 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGa > 1:2189898/1‑140 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGa > 1:1096917/1‑140 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGa > 1:1915464/1‑140 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGa > 1:1719218/1‑140 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGa > 1:1416831/1‑140 (MQ=255) tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGCGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGa > 2:1386261/1‑140 (MQ=255) tACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCt > 1:579988/1‑140 (MQ=255) ccTCGCCCCCGCCCCTTTTTTTTCTTTGTTATCGTCAAGGTACCG‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAAT‑TGTTTGAGAAGAGAAAAAAAAA‑‑CCGCCGATCCTg < 2:1869415/139‑1 (MQ=255) ccgcccccgccccTTTTTTTTCTTTTTTATCGTTCGGGTAACC‑GTGGATGGTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACACC‑TTTTTGAAAAAAAAAAAAAAAA‑‑CCGCCGATCCTGTc < 2:1876245/139‑1 (MQ=255) ccccccGGCCTTTTTTTTTCATTTTTTTCGTTCGGTTACCG‑GTGGATGGTTATGGGAAACTGGGGTGTTTTACTTTGGTGGTGTTGAGGTTTTTTTTAAATT‑TTTTTGAAAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCa < 2:183229/137‑1 (MQ=255) cTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCAc > 2:417493/1‑140 (MQ=255) tCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCAcc > 2:926661/1‑140 (MQ=255) tCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCAcc > 2:1274150/1‑140 (MQ=255) cGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCa > 1:1879962/1‑140 (MQ=255) ggCCCTTTTTTTTCTTTTTTTTCTTTCGGGTAACC‑GTGGATGTTTATCGGCAACTTGGTTGTTTTAGGTTAGTGGTGATCGGGTTTTTTTTACAAC‑TGTTTGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCAt < 2:1915464/140‑1 (MQ=255) ggCCCGTTCTTTTTTTTGTTATCTTTCAGGTAACC‑GTGGATGTTTATCGGCAACGCGGGTGTTTTACGTTAGGGGTGTTCAGGTTTTTTTTACAAC‑TGTTTGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCAt < 2:1416831/140‑1 (MQ=255) gccccTTTTTTTTTTTTGTTATCGTTCAGGTACCG‑GTGGATGGTTATCGGCAACTGGGGTGATTTACTTTAGTGGTGATCGGTTTTTTTTTACAAT‑TGTTGGAAAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCAt < 2:1719218/138‑1 (MQ=255) gCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCAtt > 1:2017704/1‑140 (MQ=255) cccGTTTTTTTCATTTTTATCGTTCAGGTAACC‑GTGGATGTTTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAAC‑TGTTTGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTa < 1:1386261/140‑1 (MQ=255) ttttttCATTTTTTTCGTT‑AGGTTACCGGGGGATGGTTACCGCAAGCTGGGGTGATTTACTTTAGTGGTAATCGGTTTTTTTTAACATC‑TTTTAGAGAGGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCa < 2:2017704/138‑1 (MQ=255) cATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTTGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAg > 1:1935286/1‑140 (MQ=255) tGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 2:1402948/1‑140 (MQ=255) tGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGGGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTgg > 1:1919841/1‑140 (MQ=255) gaGGTAACG‑GTGGATGTTTATCGGCAACTGGGGTGTTTTACGTTGGTGGTGACCAGTTTTTTTTTACACT‑TGTTTGAAAAGAAAAAAAAAAC‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg < 2:1070757/139‑1 (MQ=255) cAGGTAACT‑GTGGATGGTTATCGGCACCTGGGTTGTTTTTTGTTGGTGGTGATGAGTCTTTTTTTACAAC‑TTTTGGAAAGGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg < 2:688611/140‑1 (MQ=255) cAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcgg > 1:1648127/1‑140 (MQ=255) ggTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg > 2:839952/1‑140 (MQ=255) ggTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcggcg > 1:270917/1‑140 (MQ=255) aCC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCt > 1:1029216/1‑140 (MQ=255) aCC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCt > 1:1550339/1‑140 (MQ=255) c‑GTGGATGTTTATCGCAAACTGGGGTGTTTTGCGTAGGTGGTGTTCGGTTTTTTTTTACAAC‑TGTTTGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTa < 1:213633/140‑1 (MQ=255) gATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtt > 1:2055743/1‑140 (MQ=255) tATCGGCACCTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAAT‑TTTTGGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTgg < 2:579988/140‑1 (MQ=255) gggCACCTGGGGTGTTTTAGTTTGGGGGGGAT‑AGGTTTTTTTTAAAACTTGTTAGAGAAAAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg < 2:1029216/139‑1 (MQ=255) gCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGaa > 1:1314939/1‑140 (MQ=255) cAACTCGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAAC‑TGTTTGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGaaa < 1:1274150/140‑1 (MQ=255) acctggggTGTTTTACGTTAGTGGTGATCAGGTTTTTTTTACATC‑TGTTGGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg < 1:1607683/135‑1 (MQ=255) cTCGGGTGATTTACGTTAGTGGTGATCGGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat > 1:428700/1‑140 (MQ=255) cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat > 2:1112271/1‑140 (MQ=255) cTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat > 1:47056/1‑140 (MQ=255) tACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGt > 1:2204833/1‑140 (MQ=255) ttAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGGTGCa > 1:1991575/1‑140 (MQ=255) ttAGGGGTGATAGGGCTTTTTTAAAATT‑TGTTGGAGAAGAAAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 1:649313/140‑1 (MQ=255) tgaGTGGTAATCGGGTTTTTTTTACAAT‑TTTTTGAGAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCa < 2:850835/138‑1 (MQ=255) gtggtgATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGc > 1:1966004/1‑140 (MQ=255) gtggtgATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGc > 2:342367/1‑140 (MQ=255) tggtgATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCa > 1:1068638/1‑140 (MQ=255) tggtgATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCa > 1:1607469/1‑140 (MQ=255) tggtgATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCa > 1:1085949/1‑140 (MQ=255) accggtttttttttAAAAT‑TGTTAGAAAAGAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa < 2:2204833/133‑1 (MQ=255) aTCAGTTTTTTTTAACAAT‑TTTTTGAAAAAAAAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTa < 2:1085949/140‑1 (MQ=255) gCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCttt > 2:1780126/1‑140 (MQ=255) ttttttAGAAAAAAAAAAAAAACCCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACg < 2:1314939/138‑1 (MQ=255) tGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGtt < 1:342367/140‑1 (MQ=255) tGTTAGAAAAGAGAAAAAAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGtt < 1:1232198/140‑1 (MQ=255) tttGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt > 1:828514/1‑140 (MQ=255) tttGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt > 1:1270210/1‑140 (MQ=255) tttGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCt > 1:1264393/1‑140 (MQ=255) tGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGt > 2:992542/1‑140 (MQ=255) aaaaaaaaagaaac‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGa < 2:270917/135‑1 (MQ=255) agaaaaaaaaA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGc < 1:417493/140‑1 (MQ=255) aaaaaaaa‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtc < 2:1222/140‑1 (MQ=255) aaaaaaaa‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTtc < 2:559574/140‑1 (MQ=255) | GTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACC‑GTGGATGGTTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAAC‑TGTTTGAGAAGAGAAAAGAAAA‑‑CCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTC > NC_000913/1824929‑1825197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |