BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,147,102	G→T	pseudogene (590/836 nt)	yghX ←	putative hydrolase fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,147,102	0	G	T	100.0%	372.4 / NA	106	pseudogene (590/836 nt)	yghX	putative hydrolase fragment
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (60/46); total (60/46)

Only 100 of 126 total aligned reads displayed.

GGATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTGGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGTTGCAT  >  NC_000913/3146965‑3147236

ggATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTtgg                                                                                                                                      >  1:2053608/1‑140 (MQ=255)

ggATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTtgg                                                                                                                                      >  2:425012/1‑140 (MQ=255)

ggATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTtgg                                                                                                                                      >  2:316247/1‑140 (MQ=255)

ggATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTtgg                                                                                                                                      >  1:1448559/1‑140 (MQ=255)

ggATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTtgg                                                                                                                                      >  2:1923513/1‑140 (MQ=255)

 gatagataTACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGAGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGt                                                                                                                                     >  2:583230/1‑140 (MQ=255)

      atatACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTg                                                                                                                                >  1:2202540/1‑140 (MQ=255)

        ataCGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTgac                                                                                                                              <  1:2042443/140‑1 (MQ=255)

        ataCGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTgac                                                                                                                              <  2:1159568/140‑1 (MQ=255)

         taCGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTgacg                                                                                                                             <  2:897640/140‑1 (MQ=255)

           cGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTgacgac                                                                                                                           >  2:2081543/1‑140 (MQ=255)

           cGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTgacgac                                                                                                                           >  1:348474/1‑140 (MQ=255)

            gCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGAcc                                                                                                                          >  1:1959268/1‑140 (MQ=255)

            gCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGAcc                                                                                                                          >  1:1051725/1‑140 (MQ=255)

             ccTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCa                                                                                                                         >  2:1574439/1‑140 (MQ=255)

             ccTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCa                                                                                                                         <  1:2136981/140‑1 (MQ=255)

              cTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCAt                                                                                                                        >  2:174589/1‑140 (MQ=255)

                cATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATaa                                                                                                                      >  2:532834/1‑140 (MQ=255)

                cATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATaa                                                                                                                      >  1:1075410/1‑140 (MQ=255)

                cATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAACCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATaa                                                                                                                      >  1:491439/1‑140 (MQ=255)

                 aTAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATaaa                                                                                                                     >  2:1332752/1‑140 (MQ=255)

                  tAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATaaaa                                                                                                                    <  1:583230/140‑1 (MQ=255)

                  tAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATaaaa                                                                                                                    <  1:2242477/140‑1 (MQ=255)

                       cTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGTCa                                                                                                               <  2:878051/140‑1 (MQ=255)

                       cTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCa                                                                                                               <  2:797821/140‑1 (MQ=255)

                       cTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCa                                                                                                               <  1:1574439/140‑1 (MQ=255)

                        ttattaTTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCAc                                                                                                              >  1:1564195/1‑140 (MQ=255)

                         tattatTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGTTTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCa                                                                                                               <  1:136661/138‑1 (MQ=255)

                         tattatTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGTTTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCa                                                                                                               >  2:136661/1‑138 (MQ=255)

                          attattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcg                                                                                                            >  1:1359832/1‑140 (MQ=255)

                          attattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcg                                                                                                            >  2:753926/1‑140 (MQ=255)

                          attattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcg                                                                                                            >  1:830124/1‑140 (MQ=255)

                           ttattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGAAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcgc                                                                                                           >  2:1487129/1‑140 (MQ=255)

                            tattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcgcg                                                                                                          <  1:787351/140‑1 (MQ=255)

                            tattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcgcg                                                                                                          <  1:174589/140‑1 (MQ=255)

                            tattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcgcg                                                                                                          <  1:747071/140‑1 (MQ=255)

                            tattGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcgcg                                                                                                          <  2:1959268/140‑1 (MQ=255)

                             attGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTTCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCgcgc                                                                                                         <  1:316247/140‑1 (MQ=255)

                             attGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCgcgc                                                                                                         <  1:425012/140‑1 (MQ=255)

                                ggCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAgg                                                                                                      <  2:732402/140‑1 (MQ=255)

                                ggCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAgg                                                                                                      >  2:1869287/1‑140 (MQ=255)

                                ggCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAgg                                                                                                      <  1:1923513/140‑1 (MQ=255)

                                 gCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGc                                                                                                     <  2:2053608/140‑1 (MQ=255)

                                 gCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGc                                                                                                     >  1:1749860/1‑140 (MQ=255)

                                 gCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGc                                                                                                     >  1:257314/1‑140 (MQ=255)

                                  cTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGcc                                                                                                    <  1:1458182/140‑1 (MQ=255)

                                   tttCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCa                                                                                                   >  1:779634/1‑140 (MQ=255)

                                    ttCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACcgcg                                                                                                          <  1:1606269/132‑1 (MQ=255)

                                      cAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCa                                                                                                        >  1:1454653/1‑132 (MQ=255)

                                      cAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCa                                                                                                        <  2:1454653/132‑1 (MQ=255)

                                      cAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGtt                                                                                                >  1:576673/1‑140 (MQ=255)

                                           ccgccTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGa                                                                                           <  1:1869287/140‑1 (MQ=255)

                                              ccTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATAc                                                                                        <  1:1785752/140‑1 (MQ=255)

                                                   tAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGAc                                                                                   >  2:541365/1‑140 (MQ=255)

                                                          gCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAgccgcc                                                                            <  2:1581570/140‑1 (MQ=255)

                                                          gCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAgccgcc                                                                            >  1:1459921/1‑140 (MQ=255)

                                                          gCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAgccgcc                                                                            <  2:1459921/140‑1 (MQ=255)

                                                             aGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCcgcg                                                                         <  2:257314/140‑1 (MQ=255)

                                                             aGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCcgcg                                                                         <  2:1552492/140‑1 (MQ=255)

                                                             aGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTACGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCcgcg                                                                         <  2:2093032/140‑1 (MQ=255)

                                                               cccTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAgccg                                                                              >  1:1175526/1‑133 (MQ=255)

                                                                ccTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTc                                                                      <  2:576673/140‑1 (MQ=255)

                                                                   cGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGAt                                                                   <  2:1051725/140‑1 (MQ=255)

                                                                   cGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGAt                                                                   <  1:541365/140‑1 (MQ=255)

                                                                       gATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAACCGGCCCCGCGCAGGCCAGTTCCGGATCCGCGACAGCCGCCGCGTTCGATACGc                                                               <  2:348474/140‑1 (MQ=255)

                                                                        tttCGGGTGTCCAGTTCCGCGAGGTGGAGTAGAAAGGGCGCTTCAATCTTCGCCACATCGGAAGTTGGTGCCTGACGCCAAAAAACCGGCCCCGCGCGGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGcc                                                              <  2:2202540/139‑1 (MQ=255)

                                                                         ttCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCa                                                             >  1:469406/1‑140 (MQ=255)

                                                                             ggTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGAATACGCGACAGCCGCCGCGTTCGATACGCCACCGc                                                         <  2:1749860/140‑1 (MQ=255)

                                                                              gtgtCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGcc                                                        >  2:1699776/1‑140 (MQ=255)

                                                                                  ccAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAg                                                    >  1:1296876/1‑140 (MQ=255)

                                                                                   cAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGc                                                   >  1:1682437/1‑140 (MQ=255)

                                                                                    aGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCCCCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCa                                                  <  1:1332752/140‑1 (MQ=255)

                                                                                    aGTTCCGCGAAGTGGAGAAGAAAAGGCGCTTCAATCTTCGCCACTTCGGCAGTTGGTGCCGGACGACCAAAAACCGGCCCCGCGCAGGCCAGTTCCGGATACGCGAAAGCCCCCGCGTTCGATACGCCACCGCCATAGCa                                                  <  2:1296876/140‑1 (MQ=255)

                                                                                         cgcgAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCATTTCCGGATCCGCGACAGCCGCCGCGTTGGATACGCCACCGCCATAGCAAAATc                                             <  2:1564195/140‑1 (MQ=255)

                                                                                           cgAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCg                                           >  1:2148896/1‑140 (MQ=255)

                                                                                           cgAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCg                                           >  2:726584/1‑140 (MQ=255)

                                                                                                        taAAGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACtt                              >  1:1830261/1‑140 (MQ=255)

                                                                                                          aaGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCAc                                <  1:52403/136‑1 (MQ=255)

                                                                                                          aaGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCAc                                <  1:816182/136‑1 (MQ=255)

                                                                                                          aaGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCAc                                >  2:816182/1‑136 (MQ=255)

                                                                                                          aaGGCGCTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCAc                                >  2:52403/1‑136 (MQ=255)

                                                                                                           gggCGCTTCAATCTTCGCCACATGGGCAGTTGGTGCCTGACGACCAAAAAACGGCCCCGCGCGGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGc                           <  2:1075410/139‑1 (MQ=255)

                                                                                                             gcgcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCTAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCt                         >  1:853537/1‑140 (MQ=255)

                                                                                                             gcgcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCt                         >  1:112024/1‑140 (MQ=255)

                                                                                                             gcgcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCt                         >  1:579952/1‑140 (MQ=255)

                                                                                                             gcgcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCt                         >  2:1778047/1‑140 (MQ=255)

                                                                                                             gcgcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCt                         >  2:1244408/1‑140 (MQ=255)

                                                                                                               gcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGt                       >  2:45907/1‑140 (MQ=255)

                                                                                                               gcTTCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGt                       >  1:1743052/1‑140 (MQ=255)

                                                                                                                 ttCAATCTTCGCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAACAAAATCCGGTAATACCCACTTTGCCTGTCg                     >  2:1412902/1‑140 (MQ=255)

                                                                                                                           gCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATa           >  2:461592/1‑140 (MQ=255)

                                                                                                                           gCCACATCGGCAGTTGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATa           >  2:836502/1‑140 (MQ=255)

                                                                                                                              acaTCGGCATTTGGTGCCTGACGCCCAAAAAACGGCCCCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCg        <  2:112024/140‑1 (MQ=255)

                                                                                                                              acaTCGGCAGTTGGTGCCTGACGACCAAAAACCGGCCCCGCGCAGGCCAGTCCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCg        <  2:469406/140‑1 (MQ=255)

                                                                                                                              acaTCGCCGGTGGGTGCCGGACGCCCAAAAACCGGCCCCGCGCAGGCCAGTTCCGGATACGAGCCGGCCGCCGCGTTCGATACGCCTCCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCg        <  2:606435/140‑1 (MQ=255)

                                                                                                                               caTCGGCAGTTGGTGCCTGACGACCATAAAACGGCCCCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGt       <  2:793414/140‑1 (MQ=255)

                                                                                                                               caTCGGCAGTTGGTGCCTGACGACCATAAAACGGCCCCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGt       <  1:1487129/140‑1 (MQ=255)

                                                                                                                               caTCGGCAGTGGGTGCCTGACGCCCAAAATACGGCCCCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCTTTCGATCCGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGt       <  2:1756475/140‑1 (MQ=255)

                                                                                                                                    gCAGTTGGTGCCTGACGCCAATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGTTGCAt  <  1:2109295/140‑1 (MQ=255)

                                                                                                                                    gCAGTTGGTGCCTGACGACCATAAAACGGCCCCGCGCAGGCCAGTTCCGGATCCGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGTTGCAt  <  1:749761/140‑1 (MQ=255)

GGATAGATATACGCCTCATAAACCTTATTATTGGCTTTCAACGCCGCCTCGTAAGCAGGCCAGCCCTCGTTGATTCGGGTGTCCAGTTCCGCGAAGTGGAGTAGTAAAGGCGCTTCAATCTTCGCCACATCGGCAGTGGGTGCCTGACGACCATAAAACGGCACCGCGCAGGCCAGTTCCGGATACGCGACAGCCGCCGCGTTCGATACGCCACCGCCATAGCAAAATCCGGTAATACCCACTTTGCCTGTCGCTTGCGGATAGCGTTGCAT  >  NC_000913/3146965‑3147236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`