BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,167,698	C→A	pseudogene (123/219 nt)	yegZ ←	phage protein D

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,167,698	0	C	A	100.0%	551.5 / NA	155	pseudogene (123/219 nt)	yegZ	phage protein D
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (83/72); total (83/72)

Only 100 of 155 total aligned reads displayed.

GTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACCTTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTATTTTTTTATG  >  NC_000913/2167561‑2167833

     tttACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  <  1:2131203/140‑1 (MQ=255)

     tttACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  >  2:1932624/1‑140 (MQ=255)

     tttACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  <  2:1863601/140‑1 (MQ=255)

              acaaaacaaaCAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  <  2:1320417/131‑1 (MQ=255)

              acaaaacaaaCAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  <  2:410660/131‑1 (MQ=255)

              acaaaacaaaCAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  >  1:410660/1‑131 (MQ=255)

              acaaaacaaaCAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGa                                                                                                                                  >  1:1320417/1‑131 (MQ=255)

              acaaaacaaaCAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGt                                                                                                                         >  2:1338052/1‑140 (MQ=255)

                  aacaaacaGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTg                                                                                                                     <  2:804949/140‑1 (MQ=255)

                    caaacaGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCt                                                                                                                   <  2:1717705/140‑1 (MQ=255)

                    caaacaGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCt                                                                                                                   <  1:710148/140‑1 (MQ=255)

                       acaGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCt                                                                                                                   >  2:655610/1‑137 (MQ=255)

                       acaGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGt                                                                                                                >  1:146864/1‑140 (MQ=255)

                       acaGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGt                                                                                                                <  2:772093/140‑1 (MQ=255)

                              aaataaaaACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGAc                                                                                                         >  1:1431604/1‑140 (MQ=255)

                               aataaaaACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGAcg                                                                                                        >  1:1974291/1‑140 (MQ=255)

                               aataaaaACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGAcg                                                                                                        <  1:358832/140‑1 (MQ=255)

                                     aaCATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTa                                                                                                  >  2:1661310/1‑140 (MQ=255)

                                     aaCATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTa                                                                                                  >  1:1130893/1‑140 (MQ=255)

                                          cACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGcc                                                                                             >  1:1401740/1‑140 (MQ=255)

                                          cACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGcc                                                                                             >  2:1756547/1‑140 (MQ=255)

                                           aCTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCa                                                                                            <  2:1346508/140‑1 (MQ=255)

                                           aCTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCa                                                                                            >  1:1407865/1‑140 (MQ=255)

                                           aCTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCa                                                                                            <  1:1338052/140‑1 (MQ=255)

                                           aCTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGCCCTGCTCGTCTATGACGCGCTTAAAGCCa                                                                                            <  2:858645/140‑1 (MQ=255)

                                                 tATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACt                                                                                      <  1:443475/140‑1 (MQ=255)

                                                      tctGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGAc                                                                                 <  2:1915934/140‑1 (MQ=255)

                                                       ctGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCa                                                                                            >  2:392662/1‑128 (MQ=255)

                                                       ctGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCa                                                                                            <  1:392662/128‑1 (MQ=255)

                                                       ctGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGAcc                                                                                >  1:1773136/1‑140 (MQ=255)

                                                         gTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCgg                                                                              >  2:707431/1‑140 (MQ=255)

                                                          tttCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGgt                                                                             >  2:67148/1‑140 (MQ=255)

                                                             cGTACCCCGCATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGtt                                                                          >  2:820358/1‑140 (MQ=255)

                                                             cGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGAc                                                                                 <  1:131594/133‑1 (MQ=255)

                                                             cGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGtt                                                                          >  2:2000471/1‑140 (MQ=255)

                                                             cGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGtt                                                                          >  1:315087/1‑140 (MQ=255)

                                                              gTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGttt                                                                         <  2:1054010/140‑1 (MQ=255)

                                                               tACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGAc                                                                                 <  1:850331/131‑1 (MQ=255)

                                                               tACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGAc                                                                                 >  2:850331/1‑131 (MQ=255)

                                                               tACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTc                                                                        >  1:1631880/1‑140 (MQ=255)

                                                               tACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTc                                                                        >  1:850363/1‑140 (MQ=255)

                                                                aCCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTcc                                                                       <  2:1980081/140‑1 (MQ=255)

                                                                aCCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTcc                                                                       <  1:77707/140‑1 (MQ=255)

                                                                aCCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTcc                                                                       <  2:1112929/140‑1 (MQ=255)

                                                                   ccACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTcc                                                                       <  1:1888132/137‑1 (MQ=255)

                                                                   ccACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACAC‑TTGACCGGTGTTTCCgtgt                                                                   <  1:1756547/140‑1 (MQ=255)

                                                                    cacaTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCgtgt                                                                   >  1:1347447/1‑140 (MQ=255)

                                                                    cacaTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCgtgt                                                                   <  1:67148/140‑1 (MQ=255)

                                                                    cacaTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCgtgt                                                                   >  2:1540122/1‑140 (MQ=255)

                                                                      caTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTaa                                                                 >  1:1114038/1‑140 (MQ=255)

                                                                      caTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTaa                                                                 >  2:1026048/1‑140 (MQ=255)

                                                                      caTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTaa                                                                 >  2:5005/1‑140 (MQ=255)

                                                                       aTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTaaa                                                                >  1:1584989/1‑140 (MQ=255)

                                                                       aTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTaaa                                                                >  1:1191029/1‑140 (MQ=255)

                                                                       aTCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTaaa                                                                >  1:801033/1‑140 (MQ=255)

                                                                            aaaGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCt                                                           >  2:22689/1‑140 (MQ=255)

                                                                            aaaGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCt                                                           <  2:315087/140‑1 (MQ=255)

                                                                            aaaGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCt                                                           >  1:875581/1‑140 (MQ=255)

                                                                                ccTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGccc                                                       <  1:2019443/140‑1 (MQ=255)

                                                                                ccTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGccc                                                       >  1:1098600/1‑140 (MQ=255)

                                                                                 cTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCg                                                      >  1:1950483/1‑140 (MQ=255)

                                                                                 cTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCg                                                      >  2:1754424/1‑140 (MQ=255)

                                                                                   gACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGAc                                                    >  2:2129427/1‑140 (MQ=255)

                                                                                   gACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGAc                                                    >  2:1693546/1‑140 (MQ=255)

                                                                                    aCCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGAcc                                                   <  2:801033/140‑1 (MQ=255)

                                                                                          aGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTTGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGc                                             >  2:1254003/1‑140 (MQ=255)

                                                                                            ctctAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCa                                           <  2:1130893/140‑1 (MQ=255)

                                                                                                aaTGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCt                                       >  2:1320761/1‑140 (MQ=255)

                                                                                                 aTGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTg                                      <  1:1189975/140‑1 (MQ=255)

                                                                                                 aTGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTAACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTg                                      <  1:1717029/140‑1 (MQ=255)

                                                                                                    aCGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATg                                   <  1:2057531/140‑1 (MQ=255)

                                                                                                      gtcgtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGga                                 >  2:2244124/1‑140 (MQ=255)

                                                                                                      gtcgtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGga                                 <  1:2220105/140‑1 (MQ=255)

                                                                                                       tcgtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGgag                                >  2:1522649/1‑140 (MQ=255)

                                                                                                       tcgtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGgag                                <  1:2244124/140‑1 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGga                                 <  1:1099140/137‑1 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGga                                 >  2:1099140/1‑137 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGga                                 <  1:471606/137‑1 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGga                                 >  2:471606/1‑137 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGaa                              >  2:430249/1‑140 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGaa                              <  1:1661310/140‑1 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGaa                              <  2:1172603/140‑1 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGaa                              >  2:339416/1‑140 (MQ=255)

                                                                                                         gtGAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGaa                              <  2:1401740/140‑1 (MQ=255)

                                                                                                           gAAGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAAct                            <  1:288529/140‑1 (MQ=255)

                                                                                                            aaGCCGCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAActc                           <  2:1431604/140‑1 (MQ=255)

                                                                                                                 gCTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTa                      >  1:1885792/1‑140 (MQ=255)

                                                                                                                  cTATTATTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTac                     >  2:397329/1‑140 (MQ=255)

                                                                                                                   tattatTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTaca                    <  1:611481/140‑1 (MQ=255)

                                                                                                                   tattatTCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCAAGGCTGATGGAGAACTCTGCTaca                    <  1:1721077/140‑1 (MQ=255)

                                                                                                                    attattCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTacac                   >  2:594128/1‑140 (MQ=255)

                                                                                                                         tCAGAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCt              >  2:109769/1‑140 (MQ=255)

                                                                                                                            gAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTAt           >  2:109659/1‑140 (MQ=255)

                                                                                                                            gAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTAt           >  1:2241806/1‑140 (MQ=255)

                                                                                                                            gAAAATGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTAt           >  1:2000997/1‑140 (MQ=255)

                                                                                                                             aaagtgtgTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTAtt          >  1:132754/5‑140 (MQ=255)

                                                                                                                             aaaaTGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGATAACTCTGCTACACGGGCTTAtt          >  1:1636836/1‑140 (MQ=255)

                                                                                                                             aaaaTGTGTCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTAtt          <  1:1540122/140‑1 (MQ=255)

                                                                                                                                  gtgtCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTAttttttt     <  2:1885792/140‑1 (MQ=255)

                                                                                                                                   tgtCACATTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTATTTTTTTa    <  1:590829/140‑1 (MQ=255)

GTTAATTTACCCTTACAAAACAAACAGATAAAATAAAAACATCACTCATTATCTTCTGTTTCGTACCCCACATCAGAAAGCCTGACCTCAAGCTCTAATGACGTCGTGAAGCCGCTATTATTCAGAAAATGTGTCACCTTAGTGATTGTCCAGTCCTGCTCGTCTATGACGCGCTTAAAGCCAGACACTTTGACCGGTGTTTCCGTGTAAATATCTGCCCGACCGGTAGCCAGGCTGATGGAGAACTCTGCTACACGGGCTTATTTTTTTATG  >  NC_000913/2167561‑2167833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`