| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 42.2% | 75.0 / 50.3 | 71 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
| Reads supporting (aligned to +/- strand): ref base C (3/38); new base T (30/0); total (33/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.69e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAT > NC_000913/4604209‑4604481 | gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttttttt > 2:1757558/1‑140 (MQ=255)gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttttttt > 2:784004/1‑140 (MQ=255)gCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttttttt > 2:1412913/1‑140 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttcttttt < 2:76591/140‑1 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttcttttt < 2:453957/140‑1 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttcttttt < 2:1240179/140‑1 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttcttttt > 2:1286829/1‑140 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATtttttcttttt < 1:1302697/140‑1 (MQ=255) tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTttttctttttct < 2:609099/140‑1 (MQ=255) tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTttttctttttct < 2:243257/140‑1 (MQ=255) cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CAttttttttttttttt > 2:749834/1‑137 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGc < 2:917331/140‑1 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGc < 1:1286829/140‑1 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCa < 1:1615793/140‑1 (MQ=255) agtagtATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCAt < 1:1142551/140‑1 (MQ=255) tagttTCGGTATTGAGAGTTTATTCAGAAAGTTTGCTGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATga < 2:1546374/140‑1 (MQ=255) tagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATA‑CAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATtag > 2:85003/1‑140 (MQ=255) gtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATgaga < 1:1412913/140‑1 (MQ=255) aTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATTCCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAg < 1:1873670/140‑1 (MQ=255) tCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAgg > 2:1024183/1‑139 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAg > 2:1364953/1‑140 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCTTTAGAAGTGAg > 2:439994/1‑140 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAg < 1:1216693/140‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATTAGAAGGGAgcg > 2:1672544/1‑140 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTCTGCCAt > 1:1834261/1‑128 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCAt < 2:1834261/128‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg < 2:682099/140‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg < 1:693842/140‑1 (MQ=255) tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCa < 2:1145107/140‑1 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATTAGAAGTGAGGGCag > 2:1471296/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTCGCTTGTGAAGTGAgcggcg > 2:693842/1‑137 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCag > 2:1618825/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag < 1:439994/140‑1 (MQ=255) agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCaga > 2:1216693/1‑140 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 1:243217/140‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 1:749834/140‑1 (MQ=255) gacagtATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 1:524604/135‑1 (MQ=255) tttATTCACAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCCATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑TCTTTTTTTTTTTTTTCGCCTGCCGAGTGAGCGCacccgag > 2:1473288/1‑134 (MQ=255) ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTTTGCCCTGAGAAGTGAGCGCCGAGAggg > 1:1841432/1‑140 (MQ=255) ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAggg < 1:1757558/140‑1 (MQ=255) ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAggg < 1:1672544/140‑1 (MQ=255) aTTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAggggt > 1:1277726/1‑138 (MQ=255) cAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTAt < 2:331063/140‑1 (MQ=255) aGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATc < 1:881660/140‑1 (MQ=255) aaaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCtt > 1:1899500/1‑140 (MQ=255) aaaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCtt > 1:1076035/1‑140 (MQ=255) aaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTg < 1:216429/140‑1 (MQ=255) tttGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCGGAGAGGGATTTTCtctttc > 2:524604/1‑135 (MQ=255) aCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGATTTTCTTGCCTGACTG‑AACTg > 2:1272517/1‑140 (MQ=255) aCCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTg < 2:509748/140‑1 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGAAGTGAGCGCAGAGGGGGGTTATTTTTCCTGACTG‑AACTGGCGAtt > 2:605915/1‑140 (MQ=255) aaGCTCCATACCTATA‑CAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAg < 1:85003/140‑1 (MQ=255) tACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTG‑AACTGGCGGTTAAGTTTTcgc > 2:1267303/1‑140 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTAcc < 1:1364953/140‑1 (MQ=255) taCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCAGAGAGGGGTTTTTTTGCCTGACTG‑AACTGGCGATTTAGTTTCCCCGTAccc > 2:241594/1‑140 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGGGAGGGGTTATTTTGCCTGACTG‑TACTGGCGATTAAGTTTTCGCGGACCCGGCgg > 2:91834/1‑139 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGt < 1:1024183/140‑1 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCAGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGt > 1:1833242/1‑140 (MQ=255) tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGtt > 2:154115/1‑140 (MQ=255) cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CGTTTTTTTTTTTTCTTCCCTGAGAAGTGAGGGCCGAGGGGGGGTTTCTTTTCTCGCAGAAATTGGGGATAAAATTT‑CGCGTACCCGGCGctt > 2:938894/1‑140 (MQ=255) cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTCCGAAAAGAGCGCAGGGAGGGATTATCTTTCCTGACTG‑TACTGGCCATTTAGGTTCCCCGGCCCCCGCGgtt > 2:2017790/1‑140 (MQ=255) cAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGC‑GATTTTTTCTTTTTTTCCCCCGAAAAGCGAGCGCAGAGAGGGACTTTTTTGCCTGACTG‑AAATGGCGATTAAGTTTCTCCGTACGCgggggtt > 2:333493/1‑135 (MQ=255) aGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CCTTTTTTTTTTTTTTTCCATGGGAAGGGAGGGGCGAGAGGGGGTTTCTTTTCTGACTG‑AACTGGCGATTAAGTTTTCGCGCAACCGGCGgttt > 2:842276/1‑139 (MQ=255) ggAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAg < 1:1745115/140‑1 (MQ=255) gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTAAATTTTTTTTTTTTTTGCC‑TTAGAAGTAGAAGCAAAGAGGGAGTATCTTGCCTGAGTG‑GACAGGCGGGTTAATGTCCGCGGACCCGGCGCTTAGt > 2:1015247/1‑140 (MQ=255) gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTCTTCCATGAGAAGGGAGCGCAGAGAGGGATTTTCTTTCCTGACTG‑AACTTGCGGTTAAGTTTTCCCGTACCCGGCGCTTTGt > 2:1483020/1‑140 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAGGGGTTATCTTTCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCCGCGGTTTGTTAttt > 2:1563660/1‑139 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg < 1:947487/140‑1 (MQ=255) ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCg < 1:1025158/140‑1 (MQ=255) ttCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCg < 1:1483020/140‑1 (MQ=255) cAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGga < 1:511196/140‑1 (MQ=255) gATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatga < 1:842276/140‑1 (MQ=255) gATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatga < 1:443714/140‑1 (MQ=255) ttccATATAGCGGATCTAGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCAGGAGAAGTGAGCGCAGAGATGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatg < 2:1396758/138‑1 (MQ=255) gCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAGGGGTTATCTTGCCTGACTG‑AACTGGCGGTTAAGTTTTCGCGGACCCGGCGTTTAGTTATTGCGgatgatga > 2:465218/1‑140 (MQ=255) aTGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGatat < 1:1618825/140‑1 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGGTTATTTTGTCTGACTG‑AACTGGCGGTTTAATTTTCCCGTACCCGGCGTTTTGTTTTTTGGGGTGGTGATAttt > 2:637197/1‑139 (MQ=255) cgcgGATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGGGGGGTTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTTCGCGGACCCGGCGGTTTGTTATTTGGGGTGATGATATTTaa > 2:1807482/1‑140 (MQ=255) gcgGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg < 1:1974552/140‑1 (MQ=255) gATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTTTTCCATGAGAAGGGAGCGCAGAGAGGGGTTATCTTGCCTGACTG‑AACTGGCGGTTAAGTTTTCGCGTACCCGGCGGTTAGTTATTGCGGGTGATGATATTTAAACTc > 2:1583486/1‑140 (MQ=255) gATCTCGTTTGCGGCGGT‑CATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGGGGGGTTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTTCGCGTACCCGGCGTTTTGTTATTGCGGATGATGGTATTGAAGCTc > 2:1330273/1‑140 (MQ=255) tctcGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCgg < 1:241594/140‑1 (MQ=255) tctcGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCgg < 1:764815/140‑1 (MQ=255) cGTTTGCGGCGGT‑CATTTTTTTTTTTTTTGCCATGAGAAGGGAGGGCAGAGAGGGGTTATTTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGGTTAGTTATTTGGGGTGATGATATTTAAGCTCGGCTg > 2:1807088/1‑140 (MQ=255) tttGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGAt < 1:784004/140‑1 (MQ=255) gT‑CATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCAtt > 1:713593/1‑140 (MQ=255) t‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTg < 1:1267303/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 1:2017790/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt > 1:42751/1‑140 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 1:1807482/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 2:1229062/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 2:1277726/140‑1 (MQ=255) | GCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGT‑CATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTG‑AACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAT > NC_000913/4604209‑4604481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |