BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	731,083	C→A	P501T (CCT→ACT)	rhsC →	rhs element protein RhsC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	731,083	0	C	A	99.0%	327.0 / ‑3.1	104	P501T (CCT→ACT)	rhsC	rhs element protein RhsC
Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (47/56); total (48/56)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.31e-01

Only 100 of 106 total aligned reads displayed.

GCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGTTC  >  NC_000913/730946‑731219

gcATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACt                                                                                                                                        <  2:1889666/140‑1 (MQ=255)

 cATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTg                                                                                                                                       <  2:1814892/140‑1 (MQ=255)

    caccacGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATGCGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACg                                                                                                                                    <  1:1156769/140‑1 (MQ=255)

    caccacGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACg                                                                                                                                    >  2:1547234/1‑140 (MQ=255)

    caccacGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACg                                                                                                                                    <  2:97262/140‑1 (MQ=255)

     accacGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACgg                                                                                                                                   <  1:1224328/140‑1 (MQ=255)

          gCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGata                                                                                                                              <  1:1812094/140‑1 (MQ=255)

           ccGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGatat                                                                                                                             <  2:1288066/140‑1 (MQ=255)

            cGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATc                                                                                                                            >  1:1935314/1‑140 (MQ=255)

             ggATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCa                                                                                                                           <  2:2018054/140‑1 (MQ=255)

              gATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCAc                                                                                                                          >  2:805965/1‑140 (MQ=255)

              gATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCAc                                                                                                                          >  2:15169/1‑140 (MQ=255)

              gATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCAc                                                                                                                          >  1:302558/1‑140 (MQ=255)

               aTGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCAcc                                                                                                                         <  2:9363/140‑1 (MQ=255)

                 ggCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCTGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCg                                                                                                                       >  2:148433/1‑140 (MQ=255)

                 ggCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCg                                                                                                                       <  1:1962732/140‑1 (MQ=255)

                  gCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGc                                                                                                                      <  1:1566046/140‑1 (MQ=255)

                   cAGGGCGTCGGCGTTTTACTATACCCAACACAGTCAGTTAACGTCAGCAACCGGGCCTGACGGGCTGGAAATTCGCCGGGAAGATGATGAATGAGGCCGTCTGATTCAGGAAACTGCGACTGACGGCGATATCTCGCGCt                                                                                                                     <  2:1342699/140‑1 (MQ=11)

                   cAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCTGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCt                                                                                                                     <  1:148433/140‑1 (MQ=255)

                   cAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCAGTGACGGCGATATCACCCGCt                                                                                                                     <  2:1450671/140‑1 (MQ=255)

                   cAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCt                                                                                                                     <  2:1141495/140‑1 (MQ=255)

                    aGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTa                                                                                                                    >  1:1954516/1‑140 (MQ=255)

                      ggCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCt                                                                                                                     >  1:987554/1‑137 (MQ=255)

                      ggCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCt                                                                                                                     <  2:987554/137‑1 (MQ=255)

                       gCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCg                                                                                                                 <  2:111723/140‑1 (MQ=255)

                       gCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCg                                                                                                                 <  2:1267872/140‑1 (MQ=255)

                       gCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCg                                                                                                                 <  1:1058339/140‑1 (MQ=255)

                        cATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGt                                                                                                                <  2:793033/140‑1 (MQ=255)

                          tCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTa                                                                                                              <  1:1547234/140‑1 (MQ=255)

                           cGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTa                                                                                                                    >  2:1541747/1‑133 (MQ=255)

                           cGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTa                                                                                                                    <  1:1541747/133‑1 (MQ=255)

                           cGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTAt                                                                                                             >  1:1488082/1‑140 (MQ=255)

                            ggCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATg                                                                                                            <  1:1065019/140‑1 (MQ=255)

                            ggCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATg                                                                                                            >  1:531164/1‑140 (MQ=255)

                              cGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGAt                                                                                                          <  1:934938/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacgca                                                                                                <  2:303097/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                                                                                <  2:1232497/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                                                                                <  2:1557496/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                                                                                <  1:624366/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                                                                                <  1:555666/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                                                                                <  2:923107/140‑1 (MQ=255)

                                        taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTACGATAATCcacaca                                                                                                <  1:1258227/140‑1 (MQ=255)

                                          accaccACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGt                                                                                              >  2:1673511/1‑140 (MQ=255)

                                             accacAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGAc                                                                                           >  1:1128382/1‑140 (MQ=255)

                                               cacaGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCcacaca                                                                                                >  1:99706/1‑133 (MQ=255)

                                                acaGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTa                                                                                        >  2:908961/1‑140 (MQ=255)

                                                   gCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAccc                                                                                     >  1:168723/1‑140 (MQ=38)

                                                    ccAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCt                                                                                    >  2:1808455/1‑140 (MQ=37)

                                                    ccAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGCTATGATAATCCACACAGTGACTTACCCt                                                                                    >  2:1897885/1‑140 (MQ=255)

                                                     cAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTg                                                                                   <  2:1488082/140‑1 (MQ=37)

                                                     cAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTg                                                                                   <  1:1673511/140‑1 (MQ=37)

                                                       gTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTgcg                                                                                 <  2:531164/140‑1 (MQ=37)

                                                        ttAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                                                                                             <  2:1893182/127‑1 (MQ=38)

                                                        ttAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                                                                                             >  1:1893182/1‑127 (MQ=255)

                                                        ttAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTgcgc                                                                                >  1:1657247/1‑140 (MQ=38)

                                                        ttAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTgcgc                                                                                >  1:1344343/1‑140 (MQ=37)

                                                          aaCGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCaa                                                                              <  2:534768/140‑1 (MQ=37)

                                                          aaCGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCaa                                                                              <  1:1397086/140‑1 (MQ=37)

                                                             gTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACgg                                                                           >  1:1531879/1‑140 (MQ=37)

                                                                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGa                                                                       >  1:1106729/1‑140 (MQ=38)

                                                                 gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGa                                                                       >  1:342883/1‑140 (MQ=255)

                                                                  ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGAt                                                                      >  1:119034/1‑140 (MQ=37)

                                                                  ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGAt                                                                      >  1:189151/1‑140 (MQ=255)

                                                                  ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGAt                                                                      >  1:188646/1‑140 (MQ=255)

                                                                            tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCa                                                            >  2:283047/1‑140 (MQ=255)

                                                                            tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCa                                                            >  2:733738/1‑140 (MQ=255)

                                                                              aCGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGc                                                          >  1:1809291/1‑140 (MQ=255)

                                                                              aCGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGc                                                          >  1:1843391/1‑140 (MQ=37)

                                                                              aCGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGc                                                          >  1:666994/1‑140 (MQ=255)

                                                                                gggCTGGAAATACGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCg                                                        >  1:1012908/1‑140 (MQ=18)

                                                                                  gCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGa                                                      >  2:550100/1‑140 (MQ=255)

                                                                                        aaTACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCa                                                <  2:1128382/140‑1 (MQ=25)

                                                                                          tACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATg                                              <  1:1466707/140‑1 (MQ=18)

                                                                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGAc                                            >  2:1221864/1‑140 (MQ=17)

                                                                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGAc                                            >  1:870474/1‑140 (MQ=18)

                                                                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGAc                                            >  2:910141/1‑140 (MQ=18)

                                                                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGAc                                            >  1:1972662/1‑140 (MQ=17)

                                                                                            cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGAc                                            >  2:450207/1‑140 (MQ=17)

                                                                                             gCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACg                                           <  1:876446/140‑1 (MQ=17)

                                                                                                gggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACg                                           >  1:1387153/1‑137 (MQ=18)

                                                                                                gggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACg                                           <  2:1387153/137‑1 (MQ=17)

                                                                                                 ggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGa                                       >  2:1309283/1‑140 (MQ=18)

                                                                                                 ggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGa                                       >  1:1161214/1‑140 (MQ=17)

                                                                                                  gAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAg                                      <  2:188646/140‑1 (MQ=17)

                                                                                                  gAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGCTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAg                                      <  1:1897885/140‑1 (MQ=17)

                                                                                                        gatgaATGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTa                                <  1:1430098/140‑1 (MQ=17)

                                                                                                            aaTGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGt                            >  1:2025535/1‑140 (MQ=17)

                                                                                                             aTGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGtt                           <  1:450207/140‑2 (MQ=17)

                                                                                                             aTGGGGCCGTCTGATTCAGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTc                           >  1:540820/1‑140 (MQ=17)

                                                                                                                              aGGAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCact          <  1:31266/140‑1 (MQ=11)

                                                                                                                               ggAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCactg         <  2:1745091/140‑1 (MQ=14)

                                                                                                                                gAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCactga        >  2:1342020/1‑140 (MQ=17)

                                                                                                                                gAAACTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCactga        <  2:1972662/140‑1 (MQ=17)

                                                                                                                                gAAACTGCCACTGACGGAGATATCGCCCGCTACCGTTATGATAATCCGCACAGTGACTTACCCTGCGCGTCGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGTGCAGTTACGGTCAGTTGCTGAGCTTCactga        <  2:527482/140‑1 (MQ=11)

                                                                                                                                 aaaCTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCactgac       <  1:1808455/140‑1 (MQ=18)

                                                                                                                                   aCTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCactgactg     <  1:1880237/140‑1 (MQ=18)

                                                                                                                                    cTGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGt    >  2:874561/1‑140 (MQ=17)

                                                                                                                                     tGCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGtt   >  1:1872577/1‑140 (MQ=17)

                                                                                                                                      gCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGTTc  <  1:733738/140‑1 (MQ=18)

                                                                                                                                      gCCACTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGTTc  <  1:283047/140‑1 (MQ=18)

GCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGTTC  >  NC_000913/730946‑731219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`