| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,116,464 | +G | coding (2649/4563 nt) | yghJ ← | putative lipoprotein YghJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,116,463 | 1 | . | G | 99.2% | 481.6 / ‑3.5 | 127 | coding (2650/4563 nt) | yghJ | putative lipoprotein YghJ |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (67/59); total (67/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.47e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
GTAGAGCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGT‑GCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCTCAT > NC_000913/3116326‑3116597 | gagCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGACCCCCCGT‑ggcca < 2:1468319/140‑5 (MQ=255) gagCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGT‑ggcca > 2:943466/1‑136 (MQ=255) gagCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGT‑ggcca > 2:59705/1‑136 (MQ=255) agCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGT‑ggccag < 1:341205/140‑6 (MQ=255) agCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGT‑ggccag < 1:869811/140‑6 (MQ=255) tCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGAc < 2:456508/140‑1 (MQ=255) cATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACg < 2:87012/140‑1 (MQ=255) cATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACg > 2:1013505/1‑140 (MQ=255) aTGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGa > 2:137448/1‑140 (MQ=255) aTGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGa > 1:251397/1‑140 (MQ=255) gCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGata > 2:700268/1‑140 (MQ=255) aTACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTcc > 2:61077/1‑140 (MQ=255) aTACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTcc > 1:616386/1‑140 (MQ=255) aCGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAg > 1:934626/1‑140 (MQ=255) aCGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAg > 1:402525/1‑140 (MQ=255) aCGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAg > 2:1075696/1‑140 (MQ=255) aCGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAg > 1:448053/1‑140 (MQ=255) cGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGt < 1:359019/140‑1 (MQ=255) cGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGt < 2:1414138/140‑1 (MQ=255) cGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAA‑CCCCGTGGCCAGGACGATATTCCAGGCAGtt < 1:944735/140‑1 (MQ=255) gCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGtt > 1:199151/1‑140 (MQ=255) tGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGa > 2:1347328/1‑140 (MQ=255) tGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGa > 1:631788/1‑140 (MQ=255) gAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGAc < 1:1328804/140‑1 (MQ=255) gAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGAc < 2:448053/140‑1 (MQ=255) aaTGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGAcc < 1:1467774/140‑1 (MQ=255) aaTGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGAcc < 2:616386/140‑1 (MQ=255) gTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCa > 2:649691/1‑140 (MQ=255) ggTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAg > 1:1366722/1‑140 (MQ=255) ggTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAg > 1:1347557/1‑140 (MQ=255) ggTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAg > 1:1291470/1‑140 (MQ=255) tGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTg > 1:908160/1‑140 (MQ=255) ccTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGat > 1:765572/1‑140 (MQ=255) ccTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGat > 1:190369/1‑140 (MQ=255) ccTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGat > 2:1276963/1‑140 (MQ=255) tAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGatat > 2:245079/1‑140 (MQ=255) aaTCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGc < 1:1422256/140‑1 (MQ=255) cAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGAtt > 2:974008/1‑140 (MQ=255) gCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTaca < 1:575506/140‑1 (MQ=255) gCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTaca < 2:565747/140‑1 (MQ=255) cGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTaca > 2:1062389/1‑133 (MQ=255) cGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTaca < 1:1062389/133‑1 (MQ=255) cGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTc > 1:527652/1‑140 (MQ=255) cGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTc > 1:136064/1‑140 (MQ=255) cTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAg < 1:1422857/140‑1 (MQ=255) cTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAg < 1:974008/140‑1 (MQ=255) ttttGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGc < 1:1108102/140‑1 (MQ=255) tCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAAcg > 2:347109/1‑140 (MQ=255) ttAAGTCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGa > 2:1297694/1‑140 (MQ=255) ttAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAATGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGa < 1:137448/140‑1 (MQ=255) tagtagCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGTCATCATAGCGATATGCCGGATTAGTACACTCTTTGAGCCCCGGGAAAGCGGCGAAAATTTtc > 2:170848/1‑140 (MQ=255) gTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCg < 1:1013505/140‑1 (MQ=255) ataCTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCa < 2:1260851/140‑1 (MQ=255) ataCTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCa < 2:1127183/140‑1 (MQ=255) taCTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAg > 1:1095524/1‑140 (MQ=255) tgGAACATACATGCCACCAGTAACCGGAACCCCCGTGGTCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTc > 1:1109278/1‑140 (MQ=255) tgGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTc > 2:159498/1‑140 (MQ=255) tgGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTc > 1:228426/1‑140 (MQ=255) tgGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTc < 2:934626/140‑1 (MQ=255) tgGAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTc < 2:251397/140‑1 (MQ=255) tgGAACATACATGCCACAAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTc > 1:1455509/1‑140 (MQ=255) ggAACATACATGCCACCAGTAGCCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCa > 1:1282542/1‑140 (MQ=255) ggAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCa > 2:1410142/1‑140 (MQ=255) ggAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCa > 2:465187/1‑140 (MQ=255) ggAACATACATGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCa > 2:1224028/1‑140 (MQ=255) catacatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAgaga > 2:1352285/1‑140 (MQ=255) catacatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAgaga > 2:250724/1‑140 (MQ=255) acatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATc > 1:115377/1‑140 (MQ=255) acatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATc > 2:850472/1‑140 (MQ=255) acatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATc > 2:682447/1‑140 (MQ=255) acatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATc > 1:183148/1‑140 (MQ=255) acatGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATc > 2:559140/1‑140 (MQ=255) atGCCACCAGTAACCGGAATCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 2:238104/140‑1 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 1:969630/140‑1 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 1:1297694/140‑1 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 2:136064/140‑1 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 2:228426/140‑1 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct > 1:941786/1‑140 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 1:850472/140‑1 (MQ=255) atGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct < 1:465187/140‑1 (MQ=255) tGCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCctc < 2:765572/140‑1 (MQ=255) gCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCctct > 1:1325801/1‑140 (MQ=255) gCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCctct < 1:245079/140‑1 (MQ=255) gCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCctct > 2:925952/1‑140 (MQ=255) gCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCctct < 1:253524/140‑1 (MQ=255) gCCACCAGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCct > 2:1365608/1‑138 (MQ=255) ccaccaGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTg > 2:396925/1‑140 (MQ=255) accaGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGtt < 1:1075696/140‑1 (MQ=255) caGTAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGtttt > 2:212522/1‑140 (MQ=255) tAACCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATg > 1:1353625/1‑140 (MQ=255) aaCCGGAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGa < 2:1095524/140‑1 (MQ=255) gAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGc < 1:59705/140‑1 (MQ=255) gAACCCCCGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGc > 1:1128307/1‑140 (MQ=255) gAACCCCCGTGGCCAGGACGATATTCAAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGc < 2:993146/140‑1 (MQ=255) cccccGTGGCCAGGACGTTATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCtc < 1:1276963/140‑1 (MQ=255) cccccGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCtc < 1:123452/140‑1 (MQ=255) cccccGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCtc < 1:700268/140‑1 (MQ=255) cccccGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCtc < 2:527652/140‑1 (MQ=255) ccccGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGACCtca < 2:1325801/140‑1 (MQ=255) cccGTGGCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCtcat < 1:376203/140‑1 (MQ=255) | GTAGAGCTCATGCTGATACAGACGCTGAATGTTGGTGCCTAAATCCGCAGCCTGCACCATCGCTTTTGCAGTGTCGGCGTTAAGGCTTAGTTGCGTATACTGTGGAACATACATGCCACCAGTAACCGGAACCCCCGT‑GCCAGGACGATATTCCAGGCAGTTGACCTCATAGTGATATGCCGGATTAGTACACTCTTTCAGCCCCGGGAACGCGGCGAAAATTTTCTCCTTCGCAGCCTTCAGAGAATCCTCTGTTTTATGATCGGCCTCAT > NC_000913/3116326‑3116597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |