Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,576,361 C→A pseudogene (2227/2721 nt) yjiV → putative uncharacterized protein YjiV

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,576,3610CA98.6% 257.1 / ‑2.9 73pseudogene (2227/2721 nt)yjiVputative uncharacterized protein YjiV
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base A (44/28);  total (44/29)
Fisher's exact test for biased strand distribution p-value = 3.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

AGCGGGTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTCACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATCGCCCCG  >  NC_000913/4576224‑4576496
                                                                                                                                         |                                                                                                                                       
aGCGGGTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAAc                                                                                                                                       >  1:845610/1‑140 (MQ=255)
 gCGGGTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCGCTGATGAATAACACGCGAATTACCGGCGTTAACt                                                                                                                                      <  2:331032/140‑1 (MQ=255)
     gTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATAc                                                                                                                                  <  1:390784/140‑1 (MQ=255)
     gTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATAc                                                                                                                                  >  1:26291/1‑140 (MQ=255)
         aaGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGAt                                                                                                                              >  2:1232988/1‑140 (MQ=255)
               ttCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTAt                                                                                                                        >  1:463866/1‑140 (MQ=255)
               ttCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTAt                                                                                                                        >  2:642439/1‑140 (MQ=255)
                  aGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTg                                                                                                                     <  1:162911/140‑1 (MQ=255)
                      ccACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCaaa                                                                                                                 >  1:173192/1‑140 (MQ=255)
                             cAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGt                                                                                                          <  1:105972/140‑1 (MQ=255)
                                ttGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTgc                                                                                                       >  2:182083/1‑140 (MQ=255)
                                  gAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTgcgc                                                                                                     >  2:611539/1‑140 (MQ=255)
                                  gAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTgcgc                                                                                                     <  1:560738/140‑1 (MQ=255)
                                   aaTGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCt                                                                                                    >  1:838738/1‑140 (MQ=255)
                                   aaTGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCt                                                                                                    >  1:935798/1‑140 (MQ=255)
                                        aCCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCgt                                                                                               >  1:1077064/1‑140 (MQ=255)
                                          cACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCgttg                                                                                             >  2:1447182/1‑140 (MQ=255)
                                            cTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCgttgtt                                                                                           <  1:881533/140‑1 (MQ=255)
                                            cTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCgttgtt                                                                                           <  1:1230775/140‑1 (MQ=255)
                                             tGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGttgttg                                                                                          >  2:731969/1‑140 (MQ=255)
                                             tGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGttgttg                                                                                          >  2:1483985/1‑140 (MQ=255)
                                             tGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGttgttg                                                                                          >  2:303093/1‑140 (MQ=255)
                                               tCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTggg                                                                                        <  2:587839/140‑1 (MQ=255)
                                                 gCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCgttgtt                                                                                           <  2:610510/135‑1 (MQ=255)
                                                 gCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCgttgtt                                                                                           >  1:610510/1‑135 (MQ=255)
                                                    gTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCaa                                                                                   <  1:642439/140‑1 (MQ=255)
                                                         ggCAACACTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTg                                                                              >  1:457066/1‑140 (MQ=255)
                                                            aaCGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTgaga                                                                           <  2:1381857/140‑1 (MQ=255)
                                                            aaCGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTgaga                                                                           <  1:611539/140‑1 (MQ=255)
                                                               gCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCg                                                                        >  1:209848/1‑140 (MQ=255)
                                                                 ttCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTCACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCt                                                                      <  2:1247067/140‑1 (MQ=255)
                                                                   cTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTaa                                                                    >  1:727420/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCTCTAAAAACAAAg                                                            >  2:100330/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            <  2:209848/140‑1 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  2:355540/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  1:330220/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  1:179714/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            <  1:303093/140‑1 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  1:820060/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  2:284938/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  1:159326/1‑140 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            <  1:1483985/140‑1 (MQ=255)
                                                                           tGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAg                                                            >  2:639405/1‑140 (MQ=255)
                                                                             cTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCt                                                          >  2:972809/1‑140 (MQ=255)
                                                                              tGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTg                                                         <  1:284938/140‑1 (MQ=255)
                                                                                   aaCGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGa                                                    <  1:1044998/140‑1 (MQ=255)
                                                                                   aaCGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGa                                                    <  2:220642/140‑1 (MQ=255)
                                                                                     cGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATg                                                  >  2:572023/1‑140 (MQ=255)
                                                                                     cGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATg                                                  >  2:824665/1‑140 (MQ=255)
                                                                                     cGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATg                                                  >  1:17539/1‑140 (MQ=255)
                                                                                     cGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATg                                                  >  2:275369/1‑140 (MQ=255)
                                                                                       aCCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGgc                                                >  2:906027/1‑140 (MQ=255)
                                                                                          aTGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCt                                             >  2:1418597/1‑140 (MQ=255)
                                                                                                 agCGCAGTCACTGATGAATAACACGCGAATTACTGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGa                                      <  1:461115/140‑1 (MQ=255)
                                                                                                  gcgcAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGAc                                     >  1:639086/1‑140 (MQ=255)
                                                                                                  gcgcAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGAc                                     <  1:731969/140‑1 (MQ=255)
                                                                                                   cgcAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACg                                    >  1:442642/1‑140 (MQ=255)
                                                                                                   cgcAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACg                                    <  1:355540/140‑1 (MQ=255)
                                                                                                   cgcAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACg                                    <  1:860258/140‑1 (MQ=255)
                                                                                                   cgcAGTCACTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACg                                    <  1:639405/140‑1 (MQ=255)
                                                                                                           cTGATGAATAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATAc                            <  1:786374/140‑1 (MQ=255)
                                                                                                                  aTAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTAttt                     >  1:210322/1‑140 (MQ=255)
                                                                                                                   tAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTta                    <  2:820060/140‑1 (MQ=255)
                                                                                                                   tAACACGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTta                    <  2:727420/140‑1 (MQ=255)
                                                                                                                      cacGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTtaaag                 >  1:144463/1‑140 (MQ=255)
                                                                                                                      cacGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTta                    >  2:839312/1‑137 (MQ=255)
                                                                                                                      cacGCGAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTta                    <  1:839312/137‑1 (MQ=255)
                                                                                                                        cgcgAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTtaaagat               >  1:1317544/1‑140 (MQ=255)
                                                                                                                           gAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTtaaagataaa            >  1:1053352/1‑140 (MQ=255)
                                                                                                                           gAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTtaaagataaa            >  2:768825/1‑140 (MQ=255)
                                                                                                                           gAATTACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTtaaagataaa            >  1:1382076/1‑140 (MQ=255)
                                                                                                                               tACCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATc        <  2:159326/140‑1 (MQ=255)
                                                                                                                                aCCGGCGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATCg       >  1:738466/1‑140 (MQ=255)
                                                                                                                                     cGTTAACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATCGCCCCg  >  2:751893/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                       
AGCGGGTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTCACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATCGCCCCG  >  NC_000913/4576224‑4576496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: