BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,023,757	G→T	P43T (CCG→ACG)	yccS ←	putative transporter YccS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,023,757	0	G	T	100.0%	417.4 / NA	118	P43T (CCG→ACG)	yccS	putative transporter YccS
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (52/66); total (52/66)

Only 100 of 120 total aligned reads displayed.

GGCCAGGGAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGGAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCATA  >  NC_000913/1023621‑1023893

ggccagggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAAt                                                                                                                                       >  1:969717/1‑140 (MQ=255)

ggccagggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAAt                                                                                                                                       >  2:1075683/1‑140 (MQ=255)

   cagggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACTTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGt                                                                                                                                    <  1:859854/140‑1 (MQ=255)

   cagggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGt                                                                                                                                    <  2:468389/140‑1 (MQ=255)

   cagggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGt                                                                                                                                    <  2:662867/140‑1 (MQ=255)

   cagggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGt                                                                                                                                    <  1:789931/140‑1 (MQ=255)

    agggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTc                                                                                                                                   >  1:1219005/1‑140 (MQ=255)

    agggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTc                                                                                                                                   >  1:1162242/1‑140 (MQ=255)

     gggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCa                                                                                                                                  >  2:1470534/1‑140 (MQ=255)

     gggAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCa                                                                                                                                  >  2:344290/1‑140 (MQ=255)

           cAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTa                                                                                                                            >  1:992145/1‑140 (MQ=255)

           cAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTa                                                                                                                            >  2:886233/1‑140 (MQ=255)

            aGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTAc                                                                                                                           <  1:236571/140‑1 (MQ=255)

                    tACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCa                                                                                                                   >  2:904219/1‑140 (MQ=255)

                      cTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGc                                                                                                                 <  1:1261133/140‑1 (MQ=255)

                        gAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGcca                                                                                                               >  2:1002357/1‑140 (MQ=255)

                          ggCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGccacc                                                                                                             >  1:787787/1‑140 (MQ=255)

                           gCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGccacca                                                                                                            >  1:1297018/1‑140 (MQ=255)

                           gCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGccacca                                                                                                            >  2:173482/1‑140 (MQ=255)

                           gCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGccacca                                                                                                            >  2:1482937/1‑140 (MQ=255)

                              gAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCACCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACgg                                                                                                         >  2:1171227/1‑140 (MQ=255)

                               aGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGa                                                                                                        >  2:324661/1‑140 (MQ=255)

                               aGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGa                                                                                                        <  2:1440322/140‑1 (MQ=255)

                                 gCGAAAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGaaa                                                                                                      <  2:1332830/140‑1 (MQ=255)

                                     tAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCt                                                                                                  >  1:789003/1‑140 (MQ=255)

                                     tAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCt                                                                                                  >  2:152330/1‑140 (MQ=255)

                                     tAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCACCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCt                                                                                                  <  1:1171227/140‑1 (MQ=255)

                                      aaaaaaGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCtg                                                                                                 <  1:1002357/140‑1 (MQ=255)

                                      aaaaaaGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCtg                                                                                                 <  2:1210264/140‑1 (MQ=255)

                                           aGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGtt                                                                                            >  2:45472/1‑140 (MQ=255)

                                              aGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCca                                                                                         <  1:1164574/140‑1 (MQ=255)

                                                aaCAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCcaca                                                                                       <  1:1470534/140‑1 (MQ=255)

                                                aaCAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCcaca                                                                                       <  2:1162242/140‑1 (MQ=255)

                                                aaCAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCcaca                                                                                       >  1:781746/1‑140 (MQ=255)

                                                   aGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAg                                                                                    <  1:1003662/140‑1 (MQ=255)

                                                     cGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAgcg                                                                                  >  1:627277/1‑140 (MQ=255)

                                                     cGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAgcg                                                                                  >  1:865234/1‑140 (MQ=255)

                                                     cGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAgcg                                                                                  >  1:829654/1‑140 (MQ=255)

                                                               aGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATaaaaaa                                                                        >  2:1171829/1‑139 (MQ=255)

                                                               aGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAAt                                                                        >  1:1376444/1‑140 (MQ=255)

                                                               aGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAAt                                                                        >  1:670858/1‑140 (MQ=255)

                                                               aGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAAt                                                                        >  1:138636/1‑140 (MQ=255)

                                                               aGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAAt                                                                        >  2:1318159/1‑140 (MQ=255)

                                                               aGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAAt                                                                        >  2:1523505/1‑140 (MQ=255)

                                                                 gTTCCGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAGAGCGCAATAAAAATAc                                                                      <  2:759703/140‑1 (MQ=255)

                                                                 gTTACGCAACCGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCACCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAc                                                                      <  2:1139366/140‑1 (MQ=255)

                                                                 gTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAc                                                                      >  2:622611/1‑140 (MQ=255)

                                                                 gTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAc                                                                      <  2:969717/140‑1 (MQ=255)

                                                                 gTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAc                                                                      <  1:314326/140‑1 (MQ=255)

                                                                  ttACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCATCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcg                                                                     >  2:1067528/1‑140 (MQ=255)

                                                                    ccGCAAACTTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcg                                                                   <  2:467153/139‑1 (MQ=255)

                                                                    aCGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcg                                                                   >  2:1090879/1‑140 (MQ=255)

                                                                    aCGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcg                                                                   <  2:138636/140‑1 (MQ=255)

                                                                    aCGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcg                                                                   <  1:495039/140‑1 (MQ=255)

                                                                    aCGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCACCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcg                                                                   >  2:452025/1‑140 (MQ=255)

                                                                     cGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcgc                                                                  <  2:829654/140‑1 (MQ=255)

                                                                     cGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATAcgcgc                                                                  <  2:627277/140‑1 (MQ=255)

                                                                          aCGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAAt                                                             >  2:481018/1‑140 (MQ=255)

                                                                          aCGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAAt                                                             <  2:1376444/140‑1 (MQ=255)

                                                                             ccccGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACa                                                          <  1:1033244/139‑1 (MQ=255)

                                                                                  ccAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATAcctgtct                                                     >  1:350904/1‑134 (MQ=255)

                                                                                   cAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCGGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAgg                                                    <  2:1204707/140‑1 (MQ=255)

                                                                                     gTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGgcg                                                  <  1:173482/140‑1 (MQ=255)

                                                                                     gTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGgcg                                                  <  1:622611/140‑1 (MQ=255)

                                                                                     gTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGgcg                                                  <  2:1332073/140‑1 (MQ=255)

                                                                                     gTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGgcg                                                  <  2:561111/140‑1 (MQ=255)

                                                                                     gTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACAGCACCCAGCCACCACGGCAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGgca                                                  <  2:1098708/140‑2 (MQ=255)

                                                                                      tCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGgcgc                                                 >  2:925109/1‑140 (MQ=255)

                                                                                       cGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCt                                                <  2:675737/140‑1 (MQ=255)

                                                                                         gTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGt                                              <  2:789003/140‑1 (MQ=255)

                                                                                          tCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGtt                                             >  2:1080692/1‑140 (MQ=255)

                                                                                             tCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCa                                          <  1:1523505/140‑1 (MQ=255)

                                                                                                 gaTCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGta                                      <  1:324661/140‑1 (MQ=255)

                                                                                                    cGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAg                                   >  1:865960/1‑140 (MQ=255)

                                                                                                              cgcTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCTAGGCGCTGTTCCAGGTATAGCGTTTGAGCa                         <  2:731034/140‑1 (MQ=255)

                                                                                                              cgcTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCa                         <  1:45472/140‑1 (MQ=255)

                                                                                                               gcTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCaa                        <  1:1199893/140‑1 (MQ=255)

                                                                                                                cTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCaaa                       <  1:886233/140‑1 (MQ=255)

                                                                                                                cTGCCACCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCaaa                       >  2:1043071/1‑140 (MQ=255)

                                                                                                                 tGCCTCCATCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAg                      <  1:412768/140‑1 (MQ=255)

                                                                                                                    caccaTCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCCGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGAc                   <  1:1326241/140‑1 (MQ=255)

                                                                                                                      ccaTCCCCAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACtt                 <  2:865234/140‑1 (MQ=255)

                                                                                                                            ccAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATa           <  1:1080692/140‑1 (MQ=255)

                                                                                                                            ccAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATa           <  1:1151862/140‑1 (MQ=255)

                                                                                                                            ccAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATa           <  1:1043071/140‑1 (MQ=255)

                                                                                                                            ccAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATa           <  1:1039588/140‑1 (MQ=255)

                                                                                                                             cAGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATaa          >  2:1153501/1‑140 (MQ=255)

                                                                                                                              aGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATaaa         <  1:570847/140‑1 (MQ=255)

                                                                                                                              aGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATaaa         <  1:1282253/140‑1 (MQ=255)

                                                                                                                              aGCGTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATaaa         <  2:211284/140‑1 (MQ=255)

                                                                                                                                 gTTAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGc      <  1:925109/140‑1 (MQ=255)

                                                                                                                                  ttAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGcc     >  2:1250201/1‑140 (MQ=255)

                                                                                                                                   tAGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCa    <  1:452025/140‑1 (MQ=255)

                                                                                                                                    aGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCat   >  2:213929/1‑140 (MQ=255)

                                                                                                                                    aGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCat   >  1:617382/1‑140 (MQ=255)

                                                                                                                                    aGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCa    <  2:332695/139‑1 (MQ=255)

                                                                                                                                    aGCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCa    >  1:332695/1‑139 (MQ=255)

                                                                                                                                     gCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCata  <  2:787787/140‑1 (MQ=255)

                                                                                                                                     gCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCata  <  1:481018/140‑1 (MQ=255)

                                                                                                                                     gCGTAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCata  <  2:1297018/140‑1 (MQ=255)

GGCCAGGGAAACAGCAATTCTACTGAGGCCGAGGCGATAAAAAAGCAGAACAGCGTAATGATGAGGTTACGCAAACGTCCCGCCAGTCGGTCATCGAGATCGGTCAGCGCCGCTGCCACCATCCCCAGCGTTAGCGGAATCGTCAGTTTTACATCACCCAGCCACCACGGAAACGCTGTGGTTCCACAAAGCGCAATAAAAATACGCGCGTAATACAGCCAGGCGCTGTTCCAGGTATAGCGTTTGAGCAAAGGACTTAGCATAAAGGCCATA  >  NC_000913/1023621‑1023893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`