Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913646,7470TG23.5% 172.5 / 39.5 82T255P (ACC→CCC) citGtriphosphoribosyl‑dephospho‑CoA synthase
Reads supporting (aligned to +/- strand):  ref base T (2/60);  new base G (19/0);  total (22/60)
Fisher's exact test for biased strand distribution p-value = 1.39e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 117 total aligned reads displayed.

ATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646614‑646886
                                                                                                                                      |                                                                                                                                           
aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGAGGGTTGAAt                                                                                                                                       >  1:1924795/1‑140 (MQ=255)
      tGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGGCGGATGccccc                                                                                                                                 >  2:1429406/1‑140 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGATGcccccct                                                                                                                               >  2:882112/1‑138 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCTAATGcccccct                                                                                                                               >  1:1006284/1‑138 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGcccccct                                                                                                                               >  2:2048658/1‑138 (MQ=255)
        cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGGCGGATGgccccct                                                                                                                               >  2:362499/1‑138 (MQ=255)
         ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCttt                                                                                                                              <  2:505976/140‑1 (MQ=255)
          tAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCtttt                                                                                                                             <  1:1021799/140‑1 (MQ=255)
           aaaTAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGtt                                                                                                                                            <  2:612956/124‑1 (MQ=255)
           aaaTAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGtt                                                                                                                                            >  1:612956/1‑124 (MQ=255)
                atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGGCCCCCTTTTTCaat                                                                                                                       >  2:1967729/1‑140 (MQ=255)
                atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAGGCCCCCCTTTTTCaat                                                                                                                       >  1:1875501/1‑140 (MQ=255)
                  tAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCaataa                                                                                                                     >  1:1230557/1‑140 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAAT‑CCCCCCTTTTGCAAAAATtttttct                                                                                                             >  1:1227758/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGTCCCCCTTTTTTATTAATGtttttt                                                                                                             >  1:1909711/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATTCCCCCTTTTTTTTATAATATTTtcg                                                                                                             >  2:1892428/1‑140 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGGCCCCCTTTTTCAATAATGtttttc                                                                                                             >  1:1074135/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTTAATAAAGtttttg                                                                                                             >  2:694667/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTCAATAATAttttct                                                                                                             >  1:32822/1‑137 (MQ=255)
                          tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGACTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGATGCCCCCCTTTTTTAATAATttttttg                                                                                                             >  2:196226/1‑137 (MQ=255)
                           gCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTCAATAAAGTTTtcgc                                                                                                            >  2:1658267/1‑140 (MQ=255)
                              aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  2:1282137/140‑1 (MQ=255)
                              aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:694667/140‑1 (MQ=255)
                              aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTc                                                                                                         <  1:1658267/140‑1 (MQ=255)
                               aaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGCCCCCCTTTTTGAATAATTTTTgtcccccc                                                                                                        >  1:157514/1‑133 (MQ=255)
                                   ccAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCt                                                                                                    <  2:1924795/140‑1 (MQ=255)
                                    cAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGCATGCCCCCCTTTTTCAATAATGTTTTCGCCCCGCCCTg                                                                                                   >  2:189270/1‑140 (MQ=255)
                                      ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGCACGACCCCCTTTTTCAATAATGATTTTGCCCCCCGCtctc                                                                                                 >  2:1773480/1‑137 (MQ=255)
                                      ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTCAATAATTTTTTCGCCTCCCGCTGTa                                                                                                 >  1:728410/1‑140 (MQ=255)
                                      ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGACCCCTTTTTTTAATAAGGTTTTCGCCTCGCGCTgga                                                                                                 >  1:1392034/1‑138 (MQ=255)
                                        tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc                                                                                               <  1:1582457/140‑1 (MQ=255)
                                         aaGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGcc                                                                                              <  1:1198986/140‑1 (MQ=255)
                                             aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgcg                                                                                          <  1:189270/140‑1 (MQ=255)
                                                aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGATGCCCCCCTTTTTCCATAATGTTTTTGCCTCCCGCTGTATCCCGCGCAg                                                                                       >  2:1582457/1‑140 (MQ=255)
                                                aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTTCATAATTTTTTTGCCCCCCCCCGTAGCCAacgccg                                                                                       >  2:1620728/1‑138 (MQ=255)
                                                aGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAAGGCCCCCTTTTTTAATAAAATTTTTGCCCCCCGCCGTAGCCCgcgccg                                                                                       >  2:911006/1‑138 (MQ=255)
                                                 gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAgg                                                                                      <  1:671757/140‑1 (MQ=255)
                                                 gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGATGCCCCCCTTTTTTAATAATGTTTTCGCCTCGCGCTGTAGCCACCGCCgg                                                                                      >  2:679015/1‑140 (MQ=255)
                                                  tAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTCAATAATGTTTTTGCCCCCCGCTGTACCCAGCGCGGGc                                                                                     >  2:1395218/1‑140 (MQ=255)
                                                   aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGcc                                                                                    <  1:2048658/140‑1 (MQ=255)
                                                       cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGATGCCCCCCTTTTTTAATAATTTTTTTGCCTCCCCCTGTTTCCCCCGCCGGcccccc                                                                                >  2:794459/1‑140 (MQ=255)
                                                       cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGCCCCCCCTTTTCAATAAAGTTTTCGCCTCCCCCCCTAGCCAGCGCAGGgccccc                                                                                >  2:2021203/1‑140 (MQ=255)
                                                       cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAAGCCCCCCTTTTTTAATAAAATTTTTGCCTCGCGCCGTGTCCCGCGCCGGcccccc                                                                                >  2:1527098/1‑140 (MQ=255)
                                                         gCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGATTCCCCCCTTTTTTC‑ATAATGTTTTCGCCCCCCGCCGTAGCCAGCGCCGGgccccccc                                                                              >  2:1471685/1‑138 (MQ=255)
                                                         gCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGTATGCCCCCCCTTTGCAATAAAATTTTCGCTTCTCGCGCTTGCCCGCCCAAGcccccccc                                                                              >  2:1314515/1‑138 (MQ=255)
                                                         gCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGCCCCCCTTTTTCAATAATTTTTTCGCCCCCCGCCGTAGCCAGCGCAGGcccccccc                                                                              >  2:1505541/1‑138 (MQ=255)
                                                          cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGCCCCCCTTTTTCAATAATGTTTTCGCCCCCCCCCGTAGCCCGCGCAGGgcccccccc                                                                             >  1:880819/1‑137 (MQ=255)
                                                             cgccgccTGGACTGAGATTTCGTTCGATACTCTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCa                                                                          <  1:1165955/139‑1 (MQ=255)
                                                               ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGCCCCCCTTTTTCCATAATGTTTTCGCCCCGCGCTGTAGCCAGCGCAGGGCCCCCCCGCcccc                                                                        >  1:826687/1‑140 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:1125789/140‑1 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:1398089/140‑1 (MQ=255)
                                                                  ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACcgcg                                                                     <  1:139471/140‑1 (MQ=255)
                                                                      gACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGAt                                                                 <  1:3456/140‑1 (MQ=255)
                                                                       aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATg                                                                <  1:1618731/140‑1 (MQ=255)
                                                                           agaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAAc                                                            <  1:362499/140‑1 (MQ=255)
                                                                             aTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGt                                                          <  1:2021203/140‑1 (MQ=255)
                                                                                 cgttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGCCCCCCTTTTTTAATAAATTTTTCGCCCCCCGCCGTTGCCAGCGCCGGGCCCCCCCCCCCCCCCCCGCTGCAACGTTggg                                                      >  2:1764114/1‑139 (MQ=255)
                                                                                     cgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCg                                                  <  1:1375596/140‑1 (MQ=255)
                                                                                       aTACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGcc                                                <  2:1230557/140‑1 (MQ=255)
                                                                                       aTACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGCCCCCCTTTTTCAATAAAATTTTCGCCTCCCGCTGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGATGCAACGCTGGGATTGcc                                                >  2:675155/1‑140 (MQ=255)
                                                                                         acacTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGt                                              <  1:14559/140‑1 (MQ=255)
                                                                                           acTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTg                                            <  1:1752648/140‑1 (MQ=255)
                                                                                            cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGa                                           <  2:1838188/140‑1 (MQ=255)
                                                                                             tCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGAt                                          <  1:454580/140‑1 (MQ=255)
                                                                                             tCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGCCCCCCTTTTTTAATAAAATTTTTGCCCCCCGCCGTAGCCCACGCAGGCCCCCCCCCCCCCCCCGCGATGCAACATTGGGATTGCCGTTTAt                                          >  2:2053265/1‑140 (MQ=255)
                                                                                               ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCg                                        <  2:1092195/140‑1 (MQ=255)
                                                                                               ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCg                                        <  1:735791/140‑1 (MQ=255)
                                                                                               ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCg                                        <  1:196226/140‑1 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc                                      <  1:1532504/140‑1 (MQ=255)
                                                                                                 tGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGGCCCCCTTTTTTTATAATATTTTCGCCCCCCGCCGTGGCCCGCGCAGGCCCCCCCCCCCCCCCCCCCGTGCCACGTTGGGATTGCCGTTGGTTGcc                                      >  2:490015/1‑140 (MQ=255)
                                                                                                  gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGGCCCCCTTTTTCAATAAAGTTTTCGCCCCGCGCTGTAGCCCGCGCAGGCCCCCCCCCCCCCCCCGCGCCGCAACGTTTGGATCGCCGCTGCTccccc                                     >  2:157690/1‑139 (MQ=255)
                                                                                                  gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGCCCCCCTTTTTCAATAAAGTTTTCGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGGTGCAACGCTGGGATCGCCGTTGATCGccc                                     >  2:132732/1‑139 (MQ=255)
                                                                                                  gTCGAACTGCCGGAGATAATCGAGATCGGC‑‑GGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCAt                                    <  1:214015/140‑1 (MQ=255)
                                                                                                    cGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATc                                   <  1:108633/140‑1 (MQ=255)
                                                                                                     gAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGCCCCCCTTTTTTAATAATGTTTTCGGCCCGCGCCGTAGCCCGCGCCGGGCCCCCCCCCCCCCCCCCGGTGGCACGTTGGGATCGCCGTTGGTCTCCATcc                                  >  2:707161/1‑139 (MQ=255)
                                                                                                      aaCTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTCAATAATTTTTTTGCCCCCCGCCGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCCCGGTGCAACGTTGGGATCGCCGGTGATTGCCCTccc                                 >  2:631205/1‑138 (MQ=255)
                                                                                                      aaCTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAATGCCCCCCTTTTTCAATAATTTTTTCGCCCCCCGCTGTAGCCAGCGCCGGCCCCCCCCCCCCCCCCGCGGTGCAACGGTGGTATCGCCGTTGGTCGCCCTccg                                 >  2:1076773/1‑138 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  1:1645293/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  1:1395218/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  2:1006284/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  2:880819/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  2:826687/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt                                <  1:794459/140‑1 (MQ=255)
                                                                                                       aCTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAATGCCCCCCTTTTTTAATAATGTTTTTGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCCCCCCCCCCCCCGATGCAACGTTGGTATCGCCGCTGATCGCCCTCAGt                                >  2:1234290/1‑140 (MQ=255)
                                                                                                         tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg                              <  2:332929/140‑1 (MQ=255)
                                                                                                              gagaTAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:1505541/140‑1 (MQ=255)
                                                                                                              gagaTAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa                         <  1:1234290/140‑1 (MQ=255)
                                                                                                                    aTCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt                   <  1:1497534/140‑1 (MQ=255)
                                                                                                                      cGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCg                 <  2:1392034/140‑1 (MQ=255)
                                                                                                                         gaTCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGc              <  1:1498806/140‑1 (MQ=255)
                                                                                                                             ggc‑ggGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATg          <  1:1076773/140‑1 (MQ=255)
                                                                                                                               c‑ggGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGcc        <  2:32822/140‑1 (MQ=255)
                                                                                                                                    ggTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGtt    <  1:1892428/140‑1 (MQ=255)
                                                                                                                                     gTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc   <  1:675155/140‑1 (MQ=255)
                                                                                                                                     gTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc   <  2:516610/140‑1 (MQ=255)
                                                                                                                                     gTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc   <  1:1243715/140‑1 (MQ=255)
                                                                                                                                      ttCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa  <  1:513949/140‑1 (MQ=255)
                                                                                                                                      ttCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa  <  1:1773480/140‑1 (MQ=255)
                                                                                                                                      ttCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa  <  1:965588/140‑1 (MQ=255)
                                                                                                                                      ttCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa  <  1:1314515/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                           
ATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAATGCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGCGCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA  >  NC_000913/646614‑646886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑