Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,215,391	A→T	T176S (ACC→TCC)	mlrA →	DNA‑binding transcriptional activator MlrA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,215,391	0	A	T	100.0%	337.7 / NA	94	T176S (ACC→TCC)	mlrA	DNA‑binding transcriptional activator MlrA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (47/47);  total (47/47)

ACAACCGACTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTGAAAA  >  NC_000913/2215258‑2215521                                                                                                                                      |                                                                                                                                   acaacCGACTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTc                                                                                                                              <  2:465030/140‑1 (MQ=255)   aacCGACTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCtg                                                                                                                            <  2:2066542/140‑1 (MQ=255)         ctctCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTg                                                                                                                      <  2:1033308/140‑1 (MQ=255)             ccAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAgg                                                                                                                  >  2:292880/1‑140 (MQ=255)                   gctgctGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGa                                                                                                            >  2:1605198/1‑140 (MQ=255)                    ctgctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGAt                                                                                                           <  1:150770/140‑1 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         <  2:178215/140‑1 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         >  2:1734207/1‑140 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         >  2:1707292/1‑140 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         >  1:69439/1‑140 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         >  1:1562843/1‑140 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         >  2:146484/1‑140 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTg                                                                                                         >  1:1769153/1‑140 (MQ=255)                      gctgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGG‑ATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGc                                                                                                        >  2:1070708/1‑140 (MQ=255)                        tgGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGcc                                                                                                       <  2:1831256/140‑1 (MQ=255)                         ggCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCa                                                                                                      <  1:934997/140‑1 (MQ=255)                         ggCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCa                                                                                                      <  2:35381/140‑1 (MQ=255)                         ggCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCa                                                                                                      <  2:2006234/140‑1 (MQ=255)                          gCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAg                                                                                                     <  1:236677/140‑1 (MQ=255)                          gCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAg                                                                                                     <  1:1011469/140‑1 (MQ=255)                          gCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAg                                                                                                     <  1:1707292/140‑1 (MQ=255)                          gCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAg                                                                                                     <  2:1562843/140‑1 (MQ=255)                            gATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTc                                                                                                   <  2:1322399/140‑1 (MQ=255)                              tCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTcaa                                                                                                 <  2:444406/140‑1 (MQ=255)                               ccTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTcaac                                                                                                >  2:70293/1‑140 (MQ=255)                               ccTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTcaac                                                                                                <  2:254960/140‑1 (MQ=255)                               ccTCGACGGCGTACTGATCAACTACATCGCCATTTGTCT‑GCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTcaaca                                                                                               <  1:7980/140‑1 (MQ=255)                                 tCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTcaacaa                                                                                              >  1:593602/1‑140 (MQ=255)                                    aCGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGa                                                                                           <  1:2008332/140‑1 (MQ=255)                                        cGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGgc                                                                                       >  2:1377609/1‑140 (MQ=255)                                        cGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGgc                                                                                       >  1:423584/1‑140 (MQ=255)                                         gTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGgcg                                                                                      <  1:471087/140‑1 (MQ=255)                                         gTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGgcg                                                                                      <  1:292880/140‑1 (MQ=255)                                              gATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTg                                                                                 <  2:1014056/140‑1 (MQ=255)                                              gATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTg                                                                                 <  2:1698167/140‑1 (MQ=255)                                              gATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTg                                                                                 <  1:1997438/140‑1 (MQ=255)                                                  aaCTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGTCAGTCAACAAGGATGGCGCATTGATGt                                                                             >  2:876045/1‑140 (MQ=255)                                                    cTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTcc                                                                           >  1:34732/1‑140 (MQ=255)                                                       cATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCg                                                                        >  1:187168/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  2:880981/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  1:1742576/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  1:821350/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  2:781032/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  1:2068064/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  2:803232/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  2:528081/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  2:513985/1‑140 (MQ=255)                                                         tCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGcc                                                                      >  1:149319/1‑140 (MQ=255)                                                          cGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGccc                                                                     >  1:295125/1‑140 (MQ=255)                                                            ccATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCAc                                                                   >  2:1214910/1‑140 (MQ=255)                                                            ccATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCAc                                                                   >  1:1312417/1‑140 (MQ=255)                                                              aTTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTc                                                                 >  1:343950/1‑140 (MQ=255)                                                               tttGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCg                                                                <  1:1605198/140‑1 (MQ=255)                                                                ttGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGc                                                               <  1:401044/140‑1 (MQ=255)                                                                     tGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCtcaat                                                          <  1:421314/140‑1 (MQ=255)                                                                     tGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCtcaat                                                          <  1:70293/140‑1 (MQ=255)                                                                         ttCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTC‑GGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACt                                                     <  1:160131/140‑1 (MQ=255)                                                                          tCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCa                                                                    <  1:1206559/125‑1 (MQ=255)                                                                          tCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCa                                                                    >  2:1206559/1‑125 (MQ=255)                                                                            ggCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATTTTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCCCTCGCTCAATCAACTAc                                                   <  1:1501017/140‑1 (MQ=255)                                                                            ggCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTAc                                                   >  2:1423229/1‑140 (MQ=255)                                                                             gCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACg                                                  >  2:1937898/1‑140 (MQ=255)                                                                             gCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACg                                                  >  1:2026415/1‑140 (MQ=255)                                                                                 gTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCt                                              >  1:2004829/1‑140 (MQ=255)                                                                                  tAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTg                                             >  2:416845/1‑140 (MQ=255)                                                                                   aaaaaaCAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGa                                            <  1:528081/140‑1 (MQ=255)                                                                                       aaCAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTa                                        >  2:275621/1‑140 (MQ=255)                                                                                          aGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTc                                     <  1:513985/140‑1 (MQ=255)                                                                                           gggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCg                                    <  2:1943506/140‑1 (MQ=255)                                                                                           gggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCg                                    >  1:381312/1‑140 (MQ=255)                                                                                           gggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCg                                    >  1:1943506/1‑140 (MQ=255)                                                                                            ggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGa                                   <  2:937028/140‑1 (MQ=255)                                                                                            ggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGa                                   <  2:149319/140‑1 (MQ=255)                                                                                            ggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGa                                   <  2:1062410/140‑1 (MQ=255)                                                                                            ggTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGa                                   <  2:1742576/140‑1 (MQ=255)                                                                                             gTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGaa                                  <  2:821350/140‑1 (MQ=255)                                                                                              tAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAg                                 <  2:2068064/140‑1 (MQ=255)                                                                                                    tGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTa                           <  1:1377609/140‑1 (MQ=255)                                                                                                    tGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTa                           <  1:1730726/140‑1 (MQ=255)                                                                                                    tGCGCTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTa                           <  2:69439/140‑1 (MQ=255)                                                                                                     gcgcTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTAc                          <  1:803232/140‑1 (MQ=255)                                                                                                      cgcTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCg                                    >  1:794856/1‑129 (MQ=255)                                                                                                      cgcTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCg                                    <  2:794856/129‑1 (MQ=255)                                                                                                      cgcTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACa                         >  1:743271/1‑140 (MQ=255)                                                                                                      cgcTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACa                         >  1:584227/1‑140 (MQ=255)                                                                                                        cTGGTGGTTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACAtt                       >  1:1161484/1‑140 (MQ=255)                                                                                                           gtggtTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCt                    >  1:583077/1‑140 (MQ=255)                                                                                                            tggtTGGCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGTCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCtg                   <  1:876045/140‑1 (MQ=255)                                                                                                                 ggCTGGAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCtggtgtg              <  1:1214910/140‑1 (MQ=255)                                                                                                                     ggAATATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGc          >  1:34510/1‑140 (MQ=255)                                                                                                                       aaTATTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCgg        >  1:1706550/1‑140 (MQ=255)                                                                                                                         tatTCAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTg      <  1:1960006/140‑1 (MQ=255)                                                                                                                             cAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGTTGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTGaaaa  >  1:325091/1‑140 (MQ=255)                                                                                                                             cAGGATACCTCCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTGaaaa  >  1:78898/1‑140 (MQ=255)                                                                                                                                      |                                                                                                                                   ACAACCGACTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTGAAAA  >  NC_000913/2215258‑2215521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑