Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,232,269	T→C	G142G (GGT→GGC)	cdd →	cytidine/deoxycytidine deaminase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,232,269	0	T	C	100.0%	357.6 / NA	95	G142G (GGT→GGC)	cdd	cytidine/deoxycytidine deaminase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (48/47);  total (48/47)

GCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGG  >  NC_000913/2232134‑2232405                                                                                                                                        |                                                                                                                                         gcagcaAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTgg                                                                                                                                      >  1:248756/1‑140 (MQ=255)     caAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCt                                                                                                                                  <  2:1597830/140‑1 (MQ=255)       aaCCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGc                                                                                                                                >  2:694874/1‑140 (MQ=255)       aaCCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGc                                                                                                                                >  1:1731291/1‑140 (MQ=255)        aCCGTTCATGCCGAACAAAGCGTGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCg                                                                                                                               >  2:919681/1‑140 (MQ=255)        aCCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCg                                                                                                                               <  2:1731291/140‑1 (MQ=255)          cGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTa                                                                                                                             >  2:564732/1‑140 (MQ=255)          cGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTa                                                                                                                             >  1:1087376/1‑140 (MQ=255)            ttCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTAtt                                                                                                                           >  1:1083968/1‑140 (MQ=255)             tCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTc                                                                                                                          <  1:748455/140‑1 (MQ=255)               aTGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCAt                                                                                                                        <  1:1887445/140‑1 (MQ=255)                    gAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCGTCTGcc                                                                                                                   <  2:1418078/140‑1 (MQ=255)                    gAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGcc                                                                                                                   >  1:200108/1‑140 (MQ=255)                      aCAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCgg                                                                                                                 >  1:445503/1‑140 (MQ=255)                       cAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCggg                                                                                                                >  1:1332599/1‑140 (MQ=255)                         aaGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGcc                                                                                                              <  2:1704756/140‑1 (MQ=255)                          aGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCcg                                                                                                             >  1:1427712/1‑140 (MQ=255)                          aGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCcg                                                                                                             <  2:445503/140‑1 (MQ=255)                          aGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCcg                                                                                                             <  1:1576097/140‑1 (MQ=255)                           gcgcGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCcgc                                                                                                            <  2:200108/140‑1 (MQ=255)                            cgcgATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCcgcg                                                                                                           >  2:1617094/1‑140 (MQ=255)                             gcgATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGa                                                                                                          <  1:1312244/140‑1 (MQ=255)                                 tCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGca                                                                                                      <  2:2070048/140‑1 (MQ=255)                                    gCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCacac                                                                                                   >  1:2019600/1‑140 (MQ=255)                                      cACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACAcgc                                                                                                 <  2:1165401/140‑1 (MQ=255)                                         gCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCt                                                                                              <  1:587541/140‑1 (MQ=255)                                             ggTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGt                                                                                          <  2:1382537/140‑1 (MQ=255)                                             ggTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGt                                                                                          >  1:1189107/1‑140 (MQ=255)                                               ttGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGa                                                                                        <  2:1427712/140‑1 (MQ=255)                                               ttGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGa                                                                                        <  1:762646/140‑1 (MQ=255)                                                   gtggtgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTAt                                                                                    >  1:1325749/1‑140 (MQ=255)                                                   gtggtgAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTAt                                                                                    >  1:1358287/1‑140 (MQ=255)                                                        gAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATc                                                                                   <  1:1699956/136‑1 (MQ=255)                                                        gAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATc                                                                                   >  2:1699956/1‑136 (MQ=255)                                                           aaaGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGa                                                                            <  1:1544756/140‑1 (MQ=255)                                                              gcgcTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGc                                                                         >  1:489767/1‑140 (MQ=255)                                                                gcTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCt                                                                       >  1:755451/1‑140 (MQ=255)                                                                 cTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCtt                                                                      <  2:2019600/140‑1 (MQ=255)                                                                 cTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCtt                                                                      >  1:1517850/1‑140 (MQ=255)                                                                       gCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGcc                                                                <  2:1517850/140‑1 (MQ=255)                                                                        ccATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCg                                                               <  1:564732/140‑1 (MQ=255)                                                                         cATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGa                                                              <  2:466930/140‑1 (MQ=255)                                                                         cATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGa                                                              <  1:1617094/140‑1 (MQ=255)                                                                         cATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGa                                                              <  1:299716/140‑1 (MQ=255)                                                                              ccGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGAt                                                         <  1:1534226/140‑1 (MQ=255)                                                                                 ttAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTg                                                      <  2:489767/140‑1 (MQ=255)                                                                                   aaCTACACGCCATGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGga                                                    <  2:1680662/140‑1 (MQ=255)                                                                                      tACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGAt                                                 >  1:528117/1‑140 (MQ=255)                                                                                        cacGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTa                                               >  1:1552579/1‑140 (MQ=255)                                                                                         acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGcc                                                                >  1:1738340/1‑122 (MQ=255)                                                                                         acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGcc                                                                <  2:1738340/122‑1 (MQ=255)                                                                                         acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTaa                                              >  2:550125/1‑140 (MQ=255)                                                                                         acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTaa                                              >  2:774490/1‑140 (MQ=255)                                                                                         acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTaa                                              >  2:326874/1‑140 (MQ=255)                                                                                         acGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTaa                                              >  1:539257/1‑140 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACg                                          <  2:1325749/140‑1 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACg                                          <  2:2061337/140‑1 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACg                                          <  2:248756/140‑1 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACg                                          >  1:220991/1‑140 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACg                                          >  2:664989/1‑140 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTAACTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACg                                          <  2:951459/140‑1 (MQ=255)                                                                                             cTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACA‑‑GGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgct                                        >  1:1062538/1‑140 (MQ=255)                                                                                               tgtgGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgct                                        >  2:723096/1‑140 (MQ=255)                                                                                                gtgGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGt                                                                                          <  1:751983/89‑1 (MQ=255)                                                                                                gtgGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGt                                                                                          >  2:751983/1‑89 (MQ=255)                                                                                                gtgGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgctg                                       >  2:1353540/1‑140 (MQ=255)                                                                                                gtgGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgctg                                       >  1:907364/1‑140 (MQ=255)                                                                                                  ggTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgctgct                                     >  1:802415/1‑140 (MQ=255)                                                                                                  ggTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACgctgct                                     <  2:1087376/140‑1 (MQ=255)                                                                                                   gTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGgaga                                                  >  1:1930700/1‑126 (MQ=255)                                                                                                   gTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGgaga                                                  <  2:1930700/126‑1 (MQ=255)                                                                                                       cTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATgg                                <  2:35844/140‑1 (MQ=255)                                                                                                       cTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATgg                                >  1:171234/1‑140 (MQ=255)                                                                                                       cTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATgg                                <  1:1633889/140‑1 (MQ=255)                                                                                                       cTGCCGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATgg                                <  1:1337449/140‑1 (MQ=255)                                                                                                          ccGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACg                             >  2:1885592/1‑140 (MQ=255)                                                                                                          ccGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACg                             <  2:907364/140‑1 (MQ=255)                                                                                                           cGTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGa                            >  1:1161849/1‑140 (MQ=255)                                                                                                            gTCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGaa                           <  1:710101/140‑1 (MQ=255)                                                                                                             tCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAAc                          <  2:1606070/140‑1 (MQ=255)                                                                                                             tCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAAc                          <  1:664989/140‑1 (MQ=255)                                                                                                             tCAGTTTATGAATGAACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAAc                          <  2:1879044/140‑1 (MQ=255)                                                                                                                    atgaatgaACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCa                   >  1:815480/1‑140 (MQ=255)                                                                                                                    atgaatgaACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCa                   >  1:857713/1‑140 (MQ=255)                                                                                                                    atgaatgaACTGAACAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCa                   >  2:122206/1‑140 (MQ=255)                                                                                                                         tgaactgaacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCt              >  2:1056072/1‑140 (MQ=255)                                                                                                                         tgaactgaacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCt              >  1:1272921/1‑140 (MQ=255)                                                                                                                              tgaacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATgcg         <  2:171234/140‑1 (MQ=255)                                                                                                                              tgaacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATgcg         <  1:1045403/140‑1 (MQ=255)                                                                                                                               gaacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATgcgc        >  1:1709002/1‑140 (MQ=255)                                                                                                                                aacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGTTGCTGATGGACGAACAGGATCACGGCTATGCGCt       >  2:2001298/1‑140 (MQ=255)                                                                                                                                aacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCt       >  2:1729118/1‑140 (MQ=255)                                                                                                                                aacAGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCt       <  2:802415/140‑1 (MQ=255)                                                                                                                                   aGCGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGAc    <  2:528117/140‑1 (MQ=255)                                                                                                                                     cGGCCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACgg  >  1:1872806/1‑140 (MQ=255)                                                                                                                                        |                                                                                                                                         GCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGG  >  NC_000913/2232134‑2232405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑