Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,645,276 G→T intergenic (‑2/+70) hokD ← / ← relE Qin prophage; toxic protein HokD/Qin prophage; mRNA interferase toxin RelE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,645,2760GT100.0% 369.2 / NA 103intergenic (‑2/+70)hokD/relEQin prophage; toxic protein HokD/Qin prophage; mRNA interferase toxin RelE
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (49/54);  total (49/54)

Only 100 of 103 total aligned reads displayed.

TGTGAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATAGCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAA  >  NC_000913/1645140‑1645407
                                                                                                                                        |                                                                                                                                   
tgtgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCt                                                                                                                                  >  2:2017223/1‑140 (MQ=255)
tgtgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCt                                                                                                                                  >  1:1619496/1‑140 (MQ=255)
tgtgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCt                                                                                                                                  >  1:147005/1‑140 (MQ=255)
 gtgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTg                                                                                                                                 <  1:610062/140‑1 (MQ=255)
 gtgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTg                                                                                                                                 >  1:1241418/1‑140 (MQ=255)
 gtgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTg                                                                                                                                 >  1:1783310/1‑140 (MQ=255)
  tgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGc                                                                                                                                >  1:704970/1‑140 (MQ=255)
  tgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGc                                                                                                                                >  2:2004503/1‑140 (MQ=255)
  tgAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGc                                                                                                                                >  1:1393782/1‑140 (MQ=255)
         aGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCt                                                                                                                         >  2:438402/1‑140 (MQ=255)
         aGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCt                                                                                                                         >  1:1762472/1‑140 (MQ=255)
         aGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCt                                                                                                                         >  1:1537204/1‑140 (MQ=255)
         aGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCt                                                                                                                         >  2:187681/1‑140 (MQ=255)
         aGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCt                                                                                                                         >  2:1099300/1‑140 (MQ=255)
         aGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCt                                                                                                                         >  2:1567055/1‑140 (MQ=255)
          gCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTg                                                                                                                        >  2:752370/1‑140 (MQ=255)
          gCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTCCATATCCTGCTTCTCCTg                                                                                                                        >  1:1819115/1‑140 (MQ=255)
           cGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGt                                                                                                                       <  2:501697/140‑1 (MQ=255)
                tCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACg                                                                                                                  <  1:785874/140‑1 (MQ=255)
                tCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACg                                                                                                                  <  2:1241418/140‑1 (MQ=255)
                 ccGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGc                                                                                                                 >  2:222225/1‑140 (MQ=255)
                 ccGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGCCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGc                                                                                                                 >  1:1190533/1‑140 (MQ=255)
                  cGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCa                                                                                                                >  1:1007782/1‑140 (MQ=255)
                  cGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCa                                                                                                                <  2:1848922/140‑1 (MQ=255)
                  cGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCa                                                                                                                <  1:438402/140‑1 (MQ=255)
                  cGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCa                                                                                                                <  1:1226620/140‑1 (MQ=255)
                   gTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACg                                                                                                                  >  2:2035014/1‑137 (MQ=255)
                   gTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACg                                                                                                                  <  1:2035014/137‑1 (MQ=255)
                      tGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGc                                                                                                            <  2:704970/140‑1 (MQ=255)
                        gCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAg                                                                                                          <  1:1291957/140‑1 (MQ=255)
                          cGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGaa                                                                                                        <  2:1783310/140‑1 (MQ=255)
                            gTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAgt                                                                                                      >  1:1318524/1‑140 (MQ=255)
                             ttCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAgtg                                                                                                     >  2:1684003/1‑140 (MQ=255)
                              tCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAgtgt                                                                                                    <  2:147005/140‑1 (MQ=255)
                                  aTTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCAcc                                                                                                >  2:323671/1‑140 (MQ=255)
                                  aTTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCAcc                                                                                                >  2:901070/1‑140 (MQ=255)
                                       tACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCgg                                                                                           >  2:1223632/1‑140 (MQ=255)
                                       tACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCgg                                                                                           >  1:1996249/1‑140 (MQ=255)
                                       tACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCgg                                                                                           >  2:1548503/1‑140 (MQ=255)
                                         ccTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTg                                                                                         <  1:901070/140‑1 (MQ=255)
                                         ccTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTg                                                                                         <  1:1567055/140‑1 (MQ=255)
                                         ccTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTg                                                                                         <  2:1393782/140‑1 (MQ=255)
                                         ccTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTg                                                                                         <  2:1619496/140‑1 (MQ=255)
                                            cGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTg                                                                                         >  2:1073523/1‑137 (MQ=255)
                                            cGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTg                                                                                         <  1:1073523/137‑1 (MQ=255)
                                            cGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGa                                                                                      <  1:1929239/140‑1 (MQ=255)
                                              cAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGaaa                                                                                    <  2:288751/140‑1 (MQ=255)
                                                gagGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACa                                                                                  >  2:1632854/1‑140 (MQ=255)
                                                gagGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACa                                                                                  >  2:1294141/1‑140 (MQ=255)
                                                 agGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACag                                                                                 <  2:608006/140‑1 (MQ=255)
                                                 agGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTCCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACag                                                                                 <  2:1819115/140‑1 (MQ=255)
                                                   gTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACagag                                                                               <  1:187681/140‑1 (MQ=255)
                                                    tCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAgaga                                                                              >  1:943172/1‑140 (MQ=255)
                                                         ccTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCa                                                                         <  2:1996249/140‑1 (MQ=255)
                                                             gTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCt                                                                     <  1:1303450/140‑1 (MQ=255)
                                                             gTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCt                                                                     <  1:1294141/140‑1 (MQ=255)
                                                              ttACCAGTGCCGTCGCTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGGCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCtt                                                                    <  1:323671/140‑1 (MQ=255)
                                                                   aGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGtt                                                               >  2:1814269/1‑140 (MQ=255)
                                                                     tGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCa                                                             <  2:1762472/140‑1 (MQ=255)
                                                                          tCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGaa                                                        >  2:705055/1‑140 (MQ=255)
                                                                                 gACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGttt                                                 <  1:1099300/140‑1 (MQ=255)
                                                                                  aCGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTg                                                >  2:1635706/1‑140 (MQ=255)
                                                                                   cGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGa                                               <  1:85962/140‑1 (MQ=255)
                                                                                      ttAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCg                                            >  2:324361/1‑140 (MQ=255)
                                                                                      ttAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCg                                            <  2:943172/140‑1 (MQ=255)
                                                                                      ttAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCg                                            <  2:1873615/140‑1 (MQ=255)
                                                                                      ttAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCg                                            <  1:1632854/140‑1 (MQ=255)
                                                                                      ttAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCg                                            <  1:277958/140‑1 (MQ=255)
                                                                                      ttAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCg                                            <  1:742114/140‑1 (MQ=255)
                                                                                        aaaCAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGcc                                          <  2:1330696/140‑1 (MQ=255)
                                                                                        aaaCAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGcc                                          <  1:222225/140‑1 (MQ=255)
                                                                                        aaaCAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGcc                                          >  1:706769/1‑140 (MQ=255)
                                                                                         aaCAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCt                                         <  2:122612/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  1:2004503/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  1:1076193/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  1:1223632/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  2:456609/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  2:1691594/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  2:1281825/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  1:924415/140‑1 (MQ=255)
                                                                                           cAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCg                                       <  2:108042/140‑1 (MQ=255)
                                                                                              aTGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCta                                    >  2:1905968/1‑140 (MQ=255)
                                                                                              aTGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCta                                    >  2:619686/1‑140 (MQ=255)
                                                                                              aTGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAAAGAATGCGTTTGACCGCCTCGCta                                    >  1:223546/1‑140 (MQ=255)
                                                                                              aTGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGACATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCta                                    >  2:149627/1‑140 (MQ=255)
                                                                                                gACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCtata                                  >  1:685704/1‑140 (MQ=255)
                                                                                                gACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCtata                                  >  2:585670/1‑140 (MQ=255)
                                                                                                 aCGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTCCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCtatat                                 <  1:131715/140‑1 (MQ=255)
                                                                                                   gATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATAc                               >  2:560991/1‑140 (MQ=255)
                                                                                                      cAGGGCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTc                            <  1:585670/140‑1 (MQ=255)
                                                                                                        gggCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACg                                                                                                                  >  2:1785419/1‑52 (MQ=255)
                                                                                                        gggCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACg                                                                                                                  <  1:1785419/52‑1 (MQ=255)
                                                                                                        gggCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCg                          >  2:373568/1‑140 (MQ=255)
                                                                                                        gggCGATTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCg                          >  2:2025998/1‑140 (MQ=255)
                                                                                                             aTTAACATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGt                     <  1:1665974/140‑1 (MQ=255)
                                                                                                                  cATCGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTctct                <  1:1635706/140‑1 (MQ=255)
                                                                                                                     cGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCtttt             <  1:752370/140‑1 (MQ=255)
                                                                                                                     cGCCTTTTGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCtttt             <  1:9995/140‑1 (MQ=255)
                                                                                                                         ttttGCTGCTTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCa         <  2:1318524/140‑1 (MQ=255)
                                                                                                                                gctTCATATCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGaaa  >  1:1348240/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                   
TGTGAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAACAGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGCTTCATAGCCTGCTTCTCCTGTCAACGCAAAGCAGAAGTGTCACCTTCGGTGCGAAACAGAGATGTCATGCTTTGGTTCAGAGAATGCGTTTGACCGCCTCGCTATATACTTCCGAGCGTTCTCTTTTCCCAACAGAAA  >  NC_000913/1645140‑1645407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑