BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,796,817	G→T	G280V (GGA→GTA)	waaC →	ADP‑heptose:LPS heptosyltransferase 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,796,817	0	G	T	100.0%	369.3 / NA	106	G280V (GGA→GTA)	waaC	ADP‑heptose:LPS heptosyltransferase 1
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (51/55); total (51/55)

Only 100 of 114 total aligned reads displayed.

ATGTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCT  >  NC_000913/3796682‑3796952

aTGTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCa                                                                                                                                     >  1:35423/1‑140 (MQ=255)

aTGTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCa                                                                                                                                     >  2:702023/1‑140 (MQ=255)

  gTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAAc                                                                                                                                   <  2:924197/140‑1 (MQ=255)

  gTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAAc                                                                                                                                   <  2:198912/140‑1 (MQ=255)

   ttGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAAcc                                                                                                                                  <  2:1095022/140‑1 (MQ=255)

      aaGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGAt                                                                                                                               <  2:463488/140‑1 (MQ=255)

      aaGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGAt                                                                                                                               <  2:1620011/140‑1 (MQ=255)

      aaGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAAACGAt                                                                                                                               >  2:785552/1‑140 (MQ=255)

       aGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGGTTATGTACCAACCGATc                                                                                                                              >  2:897324/1‑140 (MQ=255)

        gTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATcc                                                                                                                             >  2:619269/1‑140 (MQ=255)

        gTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTCGATAGACCCAATATCACGGTTTATGTACCAACCGATcc                                                                                                                             >  1:312247/1‑140 (MQ=255)

         tagtGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCg                                                                                                                            <  2:401555/137‑1 (MQ=255)

         tATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTCGATAGACCCAATATCACGGTTTATGTACCAACCGATCCg                                                                                                                            <  2:312247/140‑1 (MQ=255)

           ttGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTTTGTACCAACCGATCCggg                                                                                                                          >  1:591578/1‑140 (MQ=255)

           ttGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCggg                                                                                                                          <  2:917984/140‑1 (MQ=255)

            tGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGa                                                                                                                         >  1:117400/1‑140 (MQ=255)

            tGCCGAAGATCAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAAAATCACGGTTTATGTACCAAGCGATCCggtg                                                                                                                         >  2:1146132/1‑138 (MQ=255)

             gCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGAt                                                                                                                        >  2:1286224/1‑140 (MQ=255)

             gCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGAt                                                                                                                        >  1:1801380/1‑140 (MQ=255)

                gAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTaa                                                                                                                     >  1:1209030/1‑140 (MQ=255)

                     tGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATtggt                                                                                                                <  2:945142/140‑1 (MQ=255)

                     tGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATtggt                                                                                                                <  2:1116652/140‑1 (MQ=255)

                     tGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATtggt                                                                                                                >  2:1609529/1‑140 (MQ=255)

                        gTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATTACGGTTTATGTACCAACCGATCCGGGATTAATTGGTggg                                                                                                             >  2:1633969/1‑140 (MQ=255)

                        gTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGGTTAATTGGTggg                                                                                                             >  2:1130670/1‑140 (MQ=255)

                        gTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTggg                                                                                                             >  2:552142/1‑140 (MQ=255)

                        gTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTggg                                                                                                             >  2:784002/1‑140 (MQ=255)

                          cTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTa                                                                                                           <  2:1205272/140‑1 (MQ=255)

                              aaGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCCATATCACGGTTTATGTACCCAACGATCCGGGATTAATTGGTGGGGATggg                                                                                                       >  2:493194/1‑140 (MQ=255)

                              aaGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATTACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATggg                                                                                                       >  2:53250/1‑140 (MQ=255)

                              aaGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATggg                                                                                                       <  2:568634/140‑1 (MQ=255)

                                ggCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGgaa                                                                                                     <  1:784002/140‑1 (MQ=255)

                                    ttGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAAt                                                                                                 <  2:341901/140‑1 (MQ=255)

                                     tGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATc                                                                                                <  1:1381717/140‑1 (MQ=255)

                                     tGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATc                                                                                                <  1:493194/140‑1 (MQ=255)

                                     tGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATc                                                                                                <  1:552142/140‑1 (MQ=255)

                                       cccGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAg                                                                                              <  1:1665487/140‑1 (MQ=255)

                                        ccGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATTACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGa                                                                                             <  1:1633969/140‑1 (MQ=255)

                                        ccGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGa                                                                                             <  1:1182916/140‑1 (MQ=255)

                                        ccGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGa                                                                                             <  2:468660/140‑1 (MQ=255)

                                         cgcgTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGCGGGTATGGGAAGAATCAGAt                                                                                            <  1:1146132/140‑1 (MQ=255)

                                          gcgTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATg                                                                                           <  1:1182147/140‑1 (MQ=255)

                                           cgTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGGTTAATTGGTGGGGATGGGAAGAATCAGATgg                                                                                          >  2:831292/1‑140 (MQ=255)

                                               cTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATg                                                                                      >  2:521692/1‑140 (MQ=255)

                                                tGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGt                                                                                     <  2:35768/140‑1 (MQ=255)

                                                tGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGt                                                                                     <  2:1385771/140‑1 (MQ=255)

                                                      gggCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGGGGGGATGGGGAGAATCAGATGGTATGTAGGGCt                                                                               >  2:923843/1‑140 (MQ=255)

                                                                 gTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAagag                                                                        >  2:1283244/1‑136 (MQ=255)

                                                                      gtCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATttaa                                                               >  1:935562/1‑140 (MQ=255)

                                                                      gtCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATttaa                                                               >  1:74895/1‑140 (MQ=255)

                                                                       tCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATttaat                                                              >  2:3059/1‑140 (MQ=255)

                                                                        cGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATttaatt                                                             >  1:1432109/1‑140 (MQ=255)

                                                                            ggATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGGTTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGaaaa                                                                    >  2:796336/1‑129 (MQ=255)

                                                                            ggATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGaaaa                                                                    <  1:796336/129‑1 (MQ=255)

                                                                               tACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCa                                                      >  2:641021/1‑140 (MQ=255)

                                                                                 cGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAAc                                                    <  1:1338192/140‑1 (MQ=255)

                                                                                    ggTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAAGCTCAACAGt                                                 >  2:1536868/1‑140 (MQ=255)

                                                                                    ggTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGt                                                 >  1:1118629/1‑140 (MQ=255)

                                                                                     gTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAAc                                                          <  1:696990/130‑1 (MQ=255)

                                                                                     gTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAAc                                                          >  2:696990/1‑130 (MQ=255)

                                                                                     gTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTc                                                >  1:643847/1‑140 (MQ=255)

                                                                                       tAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCaa                                              >  2:1664592/1‑140 (MQ=255)

                                                                                       tAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCaa                                              >  2:1538372/1‑140 (MQ=255)

                                                                                        aaGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAg                                             <  2:542006/140‑1 (MQ=255)

                                                                                           ccATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAg                                          <  1:798770/140‑1 (MQ=255)

                                                                                           ccATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAg                                          <  1:619269/140‑1 (MQ=255)

                                                                                              tttAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGttt                                       >  1:1410581/1‑140 (MQ=255)

                                                                                                 aaCGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTgg                                    <  2:1118629/140‑1 (MQ=255)

                                                                                                  aCGGCGGCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGa                                   <  1:3059/140‑1 (MQ=255)

                                                                                                   cggcggCACTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGaa                                  <  2:74895/140‑1 (MQ=255)

                                                                                                        gcACTGGGTAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGCGGGAATGGGAAGAATCAGATGGTATGTAGGGCACCAAGAGGAAAATTAATTAACCTCAACAGATAAGCAGTTTTGGAAAAGtt                             >  2:244165/1‑140 (MQ=255)

                                                                                                          aCTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTat                           <  1:1664592/140‑1 (MQ=255)

                                                                                                          aCTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTat                           <  1:1538372/140‑1 (MQ=255)

                                                                                                           cTGGATAGACCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTatc                          <  2:430343/140‑1 (MQ=255)

                                                                                                                   aCCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATtat                  >  1:1752624/1‑140 (MQ=255)

                                                                                                                   aCCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATtat                  <  2:1410581/140‑1 (MQ=255)

                                                                                                                   aCCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATtat                  >  1:1570063/1‑140 (MQ=255)

                                                                                                                   aCCCAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATtat                  >  2:1198494/1‑140 (MQ=255)

                                                                                                                    cccAATATCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATtata                 <  1:235150/140‑1 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  1:1774584/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  1:727894/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  2:495370/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  2:1603392/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  1:1581455/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  1:41135/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             >  2:230933/1‑140 (MQ=255)

                                                                                                                        atatCACGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAgg             <  2:1774584/140‑1 (MQ=255)

                                                                                                                             aCGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTaaaa        >  2:658520/1‑140 (MQ=255)

                                                                                                                             aCGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTaaaa        <  1:1198494/140‑1 (MQ=255)

                                                                                                                              cGGTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAAc       >  2:1430898/1‑140 (MQ=255)

                                                                                                                               ggTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      <  2:1801380/140‑1 (MQ=255)

                                                                                                                               ggTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      <  2:819483/140‑1 (MQ=255)

                                                                                                                               ggTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      <  1:230933/140‑1 (MQ=255)

                                                                                                                               ggTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      >  1:1711997/1‑140 (MQ=255)

                                                                                                                               ggTTTATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      <  1:53250/140‑1 (MQ=255)

                                                                                                                                 tttATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      <  2:1242654/138‑1 (MQ=255)

                                                                                                                                 tttATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACa      >  1:1242654/1‑138 (MQ=255)

                                                                                                                                   tATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTaaaa        <  2:589328/134‑1 (MQ=255)

                                                                                                                                   tATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTaaaa        >  1:589328/1‑134 (MQ=255)

                                                                                                                                   tATGTACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCt  >  1:320305/1‑140 (MQ=255)

ATGTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCT  >  NC_000913/3796682‑3796952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`