| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,297,994 | T→G | D89A (GAT→GCT) | napC ← | periplasmic nitrate reductase cytochrome c protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,297,994 | 0 | T | G | 98.8% | 300.5 / ‑4.5 | 81 | D89A (GAT→GCT) | napC | periplasmic nitrate reductase cytochrome c protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (34/46); total (35/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
TCTGTGCCATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAATCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCGGTGTTA > NC_000913/2297860‑2298128 | tCTGTGCCATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGa > 1:1162270/1‑140 (MQ=255)tCTGTGCCATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGa > 2:615981/1‑140 (MQ=255) tgCCATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAgg > 1:268070/1‑140 (MQ=255) ccATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTc > 2:44172/1‑140 (MQ=255) ccATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTc > 1:1331697/1‑140 (MQ=255) aTCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCg < 2:933188/139‑1 (MQ=255) aTCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCg > 1:933188/1‑139 (MQ=255) tCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCa > 1:5709/1‑140 (MQ=255) tCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCa < 2:1362262/140‑1 (MQ=255) cGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCAc > 2:666288/1‑140 (MQ=255) tCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACgg > 2:53921/1‑140 (MQ=255) cAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGa < 1:615981/140‑1 (MQ=255) cAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGa < 1:666288/140‑1 (MQ=255) aGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGAc > 2:785456/1‑140 (MQ=255) aGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGAc > 1:1076810/1‑140 (MQ=255) tGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCt < 2:1003655/140‑1 (MQ=255) tGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCt < 1:688170/140‑1 (MQ=255) tGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCt < 2:268070/140‑1 (MQ=255) tGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCt < 2:1331697/140‑1 (MQ=255) tGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCt < 2:893942/140‑1 (MQ=255) tGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCt < 2:5709/140‑1 (MQ=255) aGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTAc > 1:181671/1‑140 (MQ=255) aGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTAc < 2:452199/140‑1 (MQ=255) cAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGgttg > 1:938029/1‑140 (MQ=255) tCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAg < 2:32624/140‑1 (MQ=255) cTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGt > 1:342123/1‑140 (MQ=255) tGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTg > 2:157185/1‑140 (MQ=255) gcgTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACg < 2:1074387/140‑1 (MQ=255) gcgTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACg < 2:901306/140‑1 (MQ=255) tgtCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGaa > 2:284719/1‑140 (MQ=255) tgtCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCGTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGaa < 1:478602/140‑1 (MQ=255) gtCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAAt < 1:620957/140‑1 (MQ=255) gtCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAAt < 1:1207119/140‑1 (MQ=255) aTAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCAt < 2:344496/140‑1 (MQ=255) tAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATg < 1:497020/140‑1 (MQ=255) tAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATg < 2:342123/140‑1 (MQ=255) aaCGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGt < 1:546720/140‑1 (MQ=255) aaCGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGt < 1:801201/140‑1 (MQ=255) aaCGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGt < 2:455997/140‑1 (MQ=255) cGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTAt < 2:258651/140‑1 (MQ=255) cGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTAt < 2:1162270/140‑1 (MQ=255) cGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTAt < 2:986555/140‑1 (MQ=255) cGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTAt < 1:1269639/140‑1 (MQ=255) cGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTAt < 1:553017/140‑1 (MQ=255) gCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTAtt > 1:1328319/1‑140 (MQ=255) cAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGt < 2:738427/135‑1 (MQ=255) cAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGt > 1:738427/1‑135 (MQ=255) cAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTcc > 1:499103/1‑140 (MQ=255) tACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACAcc < 1:53921/140‑1 (MQ=255) aGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTgcg < 2:352751/140‑1 (MQ=255) cTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTg < 1:1226332/140‑1 (MQ=255) cTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTg < 1:157185/140‑1 (MQ=255) gCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCa > 1:1091715/1‑140 (MQ=255) gCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCa < 2:1076810/140‑1 (MQ=255) gCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCa > 1:1252223/1‑140 (MQ=255) gCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCa > 2:492252/1‑140 (MQ=255) gCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCa > 1:688229/1‑140 (MQ=255) tttGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGc < 2:944405/140‑1 (MQ=255) tttGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGc < 1:44172/140‑1 (MQ=255) tttGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGc < 2:688229/140‑1 (MQ=255) ttGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCt < 2:938029/140‑1 (MQ=255) tGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAg < 1:1130475/140‑1 (MQ=255) tGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAg < 1:1287918/140‑1 (MQ=255) gCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGa > 2:626338/1‑140 (MQ=255) cGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGaa < 2:181671/140‑1 (MQ=255) cGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGaa < 1:586231/140‑1 (MQ=255) cGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGaa > 1:87054/1‑140 (MQ=255) tcatcTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAActct > 1:1142789/1‑140 (MQ=255) tcatcTTCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAActct > 2:113493/1‑140 (MQ=255) ttCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGt > 2:111426/1‑140 (MQ=255) tCGGCACAAACTCGTGCGGAACGTGACAATCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTa > 2:738310/1‑140 (MQ=255) tCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTa > 2:663950/1‑140 (MQ=255) tCGGCACAAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTa > 2:148421/1‑140 (MQ=255) acaAACTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGc < 1:492252/140‑1 (MQ=255) aaaCTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTa > 1:1196654/1‑133 (MQ=255) aaaCTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTa < 2:1196654/133‑1 (MQ=255) aaCTCGTGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCttt > 1:1134578/1‑140 (MQ=255) tGCGGAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCAt > 2:1180168/1‑140 (MQ=255) ggAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATccc > 2:1361482/1‑140 (MQ=255) gAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCg < 1:113493/140‑1 (MQ=255) gAACGTGACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCg < 2:1173165/140‑1 (MQ=255) gACAAGCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCGGTGTTa > 2:1014164/1‑140 (MQ=255) | TCTGTGCCATCGTCAGACGATGAGCTTCAAATTTCTGCGGCGTGTCAATAACGCCAAAAATTTTACCATACAGCTCTTTACTTGCTTTGAGCTTGCGTATCATCTTCGGCACAAACTCGTGCGGAACGTGACAATCCGGACAGGTCGCACGGACGCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCGGTGTTA > NC_000913/2297860‑2298128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |