Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,795,859 (A)5→4 coding (186/663 nt) csiR → DNA‑binding transcriptional repressor CsiR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,795,8550A.94.7% 275.6 / 12.8 75coding (182/663 nt)csiRDNA‑binding transcriptional repressor CsiR
Reads supporting (aligned to +/- strand):  ref base A (4/0);  new base . (27/44);  total (31/44)
Fisher's exact test for biased strand distribution p-value = 2.59e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01

GATATTATTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGC  >  NC_000913/2795716‑2795990
                                                                                                                                           |                                                                                                                                       
gATATTATTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCa                                                                                                                                         >  2:877189/1‑140 (MQ=255)
gATATTATTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCa                                                                                                                                         >  2:1080124/1‑140 (MQ=255)
  tattatTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaa                                                                                                                                       <  2:90277/140‑1 (MQ=255)
  tattatTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaa                                                                                                                                       <  2:829785/140‑1 (MQ=255)
  tattatTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaa                                                                                                                                       <  2:821110/140‑1 (MQ=255)
  tattatTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaa                                                                                                                                       <  1:995151/140‑1 (MQ=255)
  tattatTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaa                                                                                                                                       <  2:681568/140‑1 (MQ=255)
   attattCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaaa                                                                                                                                      <  1:1239064/140‑1 (MQ=255)
    ttattCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTTGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCaaaag                                                                                                                                     >  2:575223/1‑139 (MQ=255)
       ttCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAgggt                                                                                                                                  >  1:675568/1‑139 (MQ=255)
       ttCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAgggt                                                                                                                                  >  1:813351/1‑139 (MQ=255)
       ttCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAgggt                                                                                                                                  >  2:334850/1‑139 (MQ=255)
       ttCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAgggt                                                                                                                                  >  2:558866/1‑139 (MQ=255)
         cgcgGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTAt                                                                                                                               <  1:313359/140‑1 (MQ=255)
         cgcgGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTAt                                                                                                                               <  1:509548/140‑1 (MQ=255)
         cgcgGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTAt                                                                                                                               <  2:57941/140‑1 (MQ=255)
         cgcgGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCACTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTAt                                                                                                                               <  2:1165122/140‑1 (MQ=255)
            ggTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCgg                                                                                                                            >  2:611209/1‑140 (MQ=255)
            ggTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCgg                                                                                                                            >  2:696483/1‑140 (MQ=255)
            ggTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCgg                                                                                                                            >  2:266007/1‑140 (MQ=255)
               aaTTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTg                                                                                                                         <  1:209907/140‑1 (MQ=255)
               aaTTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTg                                                                                                                         <  1:353714/140‑1 (MQ=255)
               aaTTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTg                                                                                                                         <  1:334850/140‑1 (MQ=255)
               aaTTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTg                                                                                                                         <  1:197308/140‑1 (MQ=255)
               aaTTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTg                                                                                                                         <  2:813351/140‑1 (MQ=255)
                   ttCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGt                                                                                                                     <  2:675568/140‑1 (MQ=255)
                    tCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTc                                                                                                                    <  1:1080124/140‑1 (MQ=255)
                         cGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGt                                                                                                               <  1:465010/140‑1 (MQ=255)
                         cGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGt                                                                                                               <  1:527028/140‑1 (MQ=255)
                          ggATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTc                                                                                                              >  2:1372707/1‑140 (MQ=255)
                          ggATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTc                                                                                                              <  2:1119913/140‑1 (MQ=255)
                          ggATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTc                                                                                                              <  1:611209/140‑1 (MQ=255)
                            aTGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGAGGCGGAACGGCTGGTCACGGTGGCGAATCAAAAGGGCATCGGGTGGCGTCTATGTCag                                                                                                            >  1:807602/1‑140 (MQ=255)
                                    ttACGAATGAGTTTGCTTACATCGCGTTATGCACTTGCCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGTCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAg                                                                                                    <  2:980080/140‑1 (MQ=255)
                                      aCGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAgct                                                                                                  >  2:884649/1‑140 (MQ=255)
                                       cGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAgctg                                                                                                 <  1:81474/140‑1 (MQ=255)
                                         aaTGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAgctgct                                                                                               >  1:1419786/1‑140 (MQ=255)
                                          aTGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTc                                                                                              <  1:266007/140‑1 (MQ=255)
                                              gTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGata                                                                                          <  2:505313/140‑1 (MQ=255)
                                               tttGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGatat                                                                                         >  1:601646/1‑140 (MQ=255)
                                                   cTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTc                                                                                     >  1:1379175/1‑140 (MQ=255)
                                                       cATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACg                                                                                 <  2:898496/140‑1 (MQ=255)
                                                           gcgTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCcg                                                                             <  2:1419786/140‑1 (MQ=255)
                                                              ttATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCgcgc                                                                          <  2:1102166/140‑1 (MQ=255)
                                                              ttATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCgcgc                                                                          <  1:307042/140‑1 (MQ=255)
                                                                 tGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGcc                                                                               <  1:1170834/132‑1 (MQ=255)
                                                                 tGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTAGATATTTTCGACGCCCGCGCCaa                                                                       >  1:36809/1‑140 (MQ=255)
                                                                 tGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGGGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGcc                                                                               >  2:1170834/1‑132 (MQ=255)
                                                                     cTTGGCGTTGGGCCGTTCCGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATg                                                                   <  1:1372707/140‑1 (MQ=255)
                                                                     cTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATg                                                                   <  1:481347/140‑1 (MQ=255)
                                                                       tGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGGATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGa                                                                 <  1:192401/140‑1 (MQ=255)
                                                                       tGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGa                                                                 >  1:401805/1‑140 (MQ=255)
                                                                       tGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGa                                                                 >  2:1104962/1‑140 (MQ=255)
                                                                        ggCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGaa                                                                >  1:451303/1‑140 (MQ=255)
                                                                         gCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAg                                                               <  2:678050/140‑1 (MQ=255)
                                                                         gCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAg                                                               <  1:884649/140‑1 (MQ=255)
                                                                             tGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGAt                                                           >  2:318145/1‑140 (MQ=255)
                                                                              gggCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATg                                                          >  1:659243/1‑140 (MQ=255)
                                                                                 ccGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTa                                                       <  2:274611/140‑1 (MQ=255)
                                                                                   gTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGt                                                     <  2:1358561/140‑1 (MQ=255)
                                                                                   gTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGt                                                     <  2:659243/140‑1 (MQ=255)
                                                                                   gTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGt                                                     <  2:913899/140‑1 (MQ=255)
                                                                                    ttACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTg                                                    >  2:480758/1‑140 (MQ=255)
                                                                                    ttACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTg                                                    >  2:559220/1‑140 (MQ=255)
                                                                                    ttACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGGGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTg                                                    >  2:327801/1‑140 (MQ=255)
                                                                                        gggAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTc                                                <  1:696483/140‑1 (MQ=255)
                                                                                              ctctTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGa                                          >  2:867449/1‑140 (MQ=255)
                                                                                               tctTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGAt                                         >  2:1243339/1‑140 (MQ=255)
                                                                                                 tttCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTg                                       >  1:309563/1‑140 (MQ=255)
                                                                                                  ttCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGc                                      >  1:682886/1‑140 (MQ=255)
                                                                                                   tCGCACCTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGcc                                     <  1:467605/140‑1 (MQ=255)
                                                                                                     gCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCcg                                   <  2:107139/140‑1 (MQ=255)
                                                                                                         cTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGt                               <  1:263614/140‑1 (MQ=255)
                                                                                                           ggtggCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTgg                             >  2:1276168/1‑140 (MQ=255)
                                                                                                               gCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGAt                         <  2:601646/140‑1 (MQ=255)
                                                                                                               gCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGAt                         <  1:1289332/140‑1 (MQ=255)
                                                                                                               gCGGAACGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGAt                         <  1:1276168/140‑1 (MQ=255)
                                                                                                                   aaCGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGcc                                     <  2:1449583/124‑1 (MQ=255)
                                                                                                                   aaCGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGcc                                     >  1:1449583/1‑124 (MQ=255)
                                                                                                                   aaCGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGt                     >  1:778336/1‑140 (MQ=255)
                                                                                                                    aCGGCTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTg                    <  1:480758/140‑1 (MQ=255)
                                                                                                                      ggCTGGTCACGGTGGTGAATCAAAAGGGTAACGGGTGGCGTCTATGTCAGAGCAGGAGCTGTTCGATAATGTCGCCGCCCCCGCCAATATGGAAGCGATGTTAGTGAGTCCGGCAATTGCCCGCGGTGGAGATGAGTggg                  <  2:807602/140‑1 (MQ=255)
                                                                                                                        cTGGTCACGGTGGTGAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAg                <  1:1104962/140‑1 (MQ=255)
                                                                                                                                 gtggtgAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGtt       >  2:532148/1‑140 (MQ=255)
                                                                                                                                      gAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGc  <  2:451303/140‑1 (MQ=255)
                                                                                                                                      gAATCAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGc  <  1:532148/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                       
GATATTATTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGC  >  NC_000913/2795716‑2795990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: