Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,778,930	(C)6→7	coding (3797/4581 nt)	ypjA ←	adhesin‑like autotransporter YpjA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,778,924	1	.	C	100.0%	221.7 / NA	62	A1268G (GCG→GGG)	ypjA	adhesin‑like autotransporter YpjA
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (25/37);  total (25/37)

ATAGCCCATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAG  >  NC_000913/2778785‑2779050                                                                                                                                             |                                                                                                                                aTAGCCCATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCg                                                                                                                                  >  2:1333991/1‑140 (MQ=255)  taccccATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑c                                                                                                                               >  2:625296/4‑140 (MQ=255)    gCCCATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCTCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccc                                                                                                                             >  2:692517/1‑140 (MQ=255)    gCCCATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccc                                                                                                                             >  2:702947/1‑140 (MQ=255)    gCCCATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccc                                                                                                                             >  1:441946/1‑140 (MQ=255)     cccATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cccc                                                                                                                            >  2:1244372/1‑140 (MQ=255)     cccATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cc                                                                                                                              <  2:676924/138‑1 (MQ=255)     cccATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cc                                                                                                                              >  1:676924/1‑138 (MQ=255)        aTAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCTCTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccccccc                                                                                                                         <  1:1084862/140‑2 (MQ=255)        aTAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccccccc                                                                                                                         >  1:1116955/1‑139 (MQ=255)         tAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccccccca                                                                                                                        >  2:1398946/1‑138 (MQ=255)         tAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑ccccccca                                                                                                                        >  1:372412/1‑138 (MQ=255)          aaaaGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cccccccag                                                                                                                       >  1:322847/1‑137 (MQ=255)           aaaGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cccccccaga                                                                                                                      <  1:1244372/140‑5 (MQ=255)           aaaGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cccccccaga                                                                                                                      <  2:1241553/140‑5 (MQ=255)           aaaGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑cccccccaga                                                                                                                      <  2:441946/140‑5 (MQ=255)             aGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCTCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACa                                                                                                                     <  1:692517/140‑1 (MQ=255)             aGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACa                                                                                                                     <  2:381712/140‑1 (MQ=255)             aGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACa                                                                                                                     <  2:1119109/140‑1 (MQ=255)             aGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACa                                                                                                                     <  1:702947/140‑1 (MQ=255)                gcCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACatta                                                                                                                  <  1:97999/140‑1 (MQ=255)                  cTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACattatt                                                                                                                <  2:372412/140‑1 (MQ=255)                                ccTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCg                                                                                                  <  1:1398946/140‑1 (MQ=255)                                  ttCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCt                                                                                                <  1:625296/140‑1 (MQ=255)                                   tCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCtt                                                                                               <  2:322847/140‑1 (MQ=255)                                      ggAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCa                                                                                            <  1:830834/140‑1 (MQ=255)                                      ggAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCa                                                                                            <  1:722000/140‑1 (MQ=255)                                          tatCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTAt                                                                                        >  1:639099/1‑140 (MQ=255)                                               ttACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCa                                                                                   >  2:713420/1‑140 (MQ=255)                                                tACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCaa                                                                                  >  2:63748/1‑140 (MQ=255)                                                 aCGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAAc                                                                                 >  2:802618/1‑140 (MQ=255)                                                 aCGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAAc                                                                                 >  2:302130/1‑140 (MQ=255)                                                 aCGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAAc                                                                                 >  1:123415/1‑140 (MQ=255)                                                   ggCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCGGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCg                                                                               <  1:937991/140‑1 (MQ=255)                                                       gTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCt                                                                             >  1:508425/1‑138 (MQ=255)                                                       gTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCt                                                                             <  2:508425/138‑1 (MQ=255)                                                       gTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTcg                                                                           >  1:1072423/1‑140 (MQ=255)                                                        tCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTcgc                                                                          <  2:123415/140‑1 (MQ=255)                                                           aTCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGaa                                                                       <  1:1090183/140‑1 (MQ=255)                                                             ccccACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATa                                                                     <  2:1072423/140‑1 (MQ=255)                                                             ccccACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATa                                                                     <  1:713420/140‑1 (MQ=255)                                                               ccACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACt                                                                   >  2:578668/1‑140 (MQ=255)                                                                     tCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAg                                                             >  1:862184/1‑140 (MQ=255)                                                                     tCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAg                                                             >  1:20230/1‑140 (MQ=255)                                                                       aTTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCt                                                           >  1:1424429/1‑140 (MQ=255)                                                                       aTTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCt                                                           >  2:199646/1‑140 (MQ=255)                                                                       aTTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCt                                                           >  1:1384163/1‑140 (MQ=255)                                                                          ccGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGCCCCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCa                                                         >  2:1214605/1‑140 (MQ=255)                                                                            ggTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCa                                                      <  1:578668/140‑1 (MQ=255)                                                                             gTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCAt                                                     >  2:1007074/1‑140 (MQ=255)                                                                               cAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCa                                                   >  2:459805/1‑140 (MQ=255)                                                                                     cTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATAcc                                             <  2:20230/140‑1 (MQ=255)                                                                                        cTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAAc                                          >  2:750202/1‑140 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                <  1:459805/140‑1 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                <  1:302130/140‑1 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                >  1:1086002/1‑140 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                <  2:1086002/140‑1 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                >  1:836586/1‑140 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                <  1:943253/140‑1 (MQ=255)                                                                                                  gCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtg                                <  1:1225194/140‑1 (MQ=255)                                                                                                     cccGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGCCCCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtgct                              <  1:1214605/140‑1 (MQ=255)                                                                                                     cccGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtgctg                             <  2:65353/140‑1 (MQ=255)                                                                                                      ccGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTtgctgc                            <  1:1333991/140‑1 (MQ=255)                                                                                                       cGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGcc                           <  2:862184/140‑1 (MQ=255)                                                                                                       cGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGcc                           <  2:1424429/140‑1 (MQ=255)                                                                                                       cGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGcc                           <  2:1384163/140‑1 (MQ=255)                                                                                                       cGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGcc                           <  1:63748/140‑1 (MQ=255)                                                                                                       cGCATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGcc                           >  1:1256534/1‑140 (MQ=255)                                                                                                         cATCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCat                         <  1:1300800/140‑1 (MQ=255)                                                                                                          aTCGGTGGTGACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCata                        <  1:199646/140‑1 (MQ=255)                                                                                                            cGGTGGTGACATTCTTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCTTCAAATACCAACGGTAATGTTGCTGCCATAtt                      <  2:21088/140‑1 (MQ=255)                                                                                                               tggtgACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAg                   <  1:519726/140‑1 (MQ=255)                                                                                                                   gACATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACg               <  2:1116955/140‑1 (MQ=255)                                                                                                                    aCATTATTACGGGTGTTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACgg              <  1:191469/140‑1 (MQ=255)                                                                                                                                gtgtTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAg  >  2:291138/1‑140 (MQ=255)                                                                                                                                gtgtTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAg  >  2:1384296/1‑140 (MQ=255)                                                                                                                                gtgtTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAg  >  1:1423353/1‑140 (MQ=255)                                                                                                                                gtgtTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAg  >  1:1361709/1‑140 (MQ=255)                                                                                                                                gggtTATACGTCGC‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAg  >  1:872481/3‑140 (MQ=255)                                                                                                                                             |                                                                                                                                ATAGCCCATAAAAGCGCCTAGCGTGGTAATTCCTTCAGGAATATCATTACGGCTGTCGATCCCCACTGTCATTCCGGTCAGCGTCTGCTCAAACCCGGCACCCGCATCGGTGGTGACATTATTACGGGTGTTATACGTCG‑‑CCCCCCAGACATTATTGTTGTGTGGACTCGCTTTCATTATGTTCAACCGCTCGCGAATACTGTTTAGCTCAGCATCAAATACCAACGGTAATGTTGCTGCCATATTGAGTACGGCTGCCGTAGAAG  >  NC_000913/2778785‑2779050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑