| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,507,424 | A→G | H215R (CAT→CGT) | rlhA → | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,507,424 | 0 | A | G | 99.0% | 330.9 / ‑4.5 | 97 | H215R (CAT→CGT) | rlhA | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (48/48); minor base T (1/0); total (49/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACATCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCG > NC_000913/1507288‑1507556 | gTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTct < 2:84791/140‑1 (MQ=255) ccTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTctgctg > 1:559885/1‑140 (MQ=255) aTTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCg > 1:235464/1‑140 (MQ=255) aTTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCg > 2:622720/1‑140 (MQ=255) aTTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGGTTCCTATGAAAAACGGCTGTTGTCg > 1:1423966/1‑140 (MQ=255) cGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGTGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATg < 1:377771/140‑1 (MQ=255) tCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAg < 1:604880/140‑1 (MQ=255) aGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGAt < 2:749333/140‑1 (MQ=255) aGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGAt < 2:452182/140‑1 (MQ=255) aGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGAt > 2:1192611/1‑140 (MQ=255) tGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATaa > 1:763565/1‑140 (MQ=255) tGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGGTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATaa > 2:193620/1‑140 (MQ=255) cATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATc > 1:246150/1‑140 (MQ=255) ttCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGa < 1:857090/140‑1 (MQ=255) ctcATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGTCATACACATTGAAAGACGATCAGGGGCGGGTGGGTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACt > 1:1162862/1‑140 (MQ=255) ctcATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACt > 2:1163908/1‑140 (MQ=255) ctcATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACt > 2:1225093/1‑140 (MQ=255) ctcATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACt > 2:752580/1‑140 (MQ=255) ctcATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAAACATCAGAcc > 2:778666/1‑139 (MQ=255) cATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGc < 1:657705/140‑1 (MQ=255) cATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGc > 2:657705/1‑140 (MQ=255) cATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGc > 1:985273/1‑140 (MQ=255) atacgcAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGcc > 2:1422074/4‑140 (MQ=255) gcgcAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGGTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCaa > 2:419210/1‑140 (MQ=255) aCAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCgg < 2:185577/140‑1 (MQ=255) ggCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGgcgcg < 2:933833/140‑1 (MQ=255) ggCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGGGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGgcgcg > 1:823671/1‑140 (MQ=255) aGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgat < 1:1422074/140‑1 (MQ=255) aGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgat < 2:246150/140‑1 (MQ=255) aGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgat < 2:235464/140‑1 (MQ=255) gcgcCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgatt > 2:571454/1‑140 (MQ=255) gcCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgattga > 1:179403/1‑140 (MQ=255) gcCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgattga < 2:179403/140‑1 (MQ=255) gcCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCtgattga > 1:67751/1‑140 (MQ=255) cAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATg > 2:749550/1‑140 (MQ=255) cAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATg > 1:884511/1‑140 (MQ=255) aaCCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGGGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGc > 1:967525/1‑140 (MQ=255) ccGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTg < 1:419210/140‑1 (MQ=255) gCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTa < 1:34013/140‑1 (MQ=255) aTTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGc < 1:571454/140‑1 (MQ=255) tGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTc > 1:246193/1‑140 (MQ=255) tGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTc < 1:141725/140‑1 (MQ=255) gCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTcc > 1:389624/1‑140 (MQ=255) cTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCt > 1:641355/1‑140 (MQ=255) tCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCtt < 1:1320615/140‑1 (MQ=255) tCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCtt < 2:884511/140‑1 (MQ=255) cGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTc > 1:611341/1‑140 (MQ=255) gCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCa < 2:389624/140‑1 (MQ=255) gCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCa < 2:1146910/140‑1 (MQ=255) gCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAATCGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGAt > 2:638510/1‑140 (MQ=255) tGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGa > 2:246259/1‑140 (MQ=255) tGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGa > 2:826089/1‑140 (MQ=255) tGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGa > 2:969760/1‑140 (MQ=255) gCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAATCGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGaa < 1:638510/140‑1 (MQ=255) gCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGaa < 1:778666/140‑1 (MQ=255) tttGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGc < 1:854017/140‑1 (MQ=255) tttGCCATACACATTGAAAGACGATCAGGGGCGGGCGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAAAATGCCCACCTCGGCGCGCTGATTGGTGCTGGTGTACGCTCCTTCAAAATTGAAGGGc > 2:943951/1‑140 (MQ=255) tGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGt > 1:1145859/1‑140 (MQ=255) tGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGt > 2:314597/1‑140 (MQ=255) tGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGt < 2:763565/140‑1 (MQ=255) aTACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACa < 2:641355/140‑1 (MQ=255) aTACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACa < 2:929847/140‑1 (MQ=255) aTACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACa < 2:920712/140‑1 (MQ=255) aTACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACa < 1:749550/140‑1 (MQ=255) tACACATTGAAAGACGATCAGGGGCGGGTGGGTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACaa > 1:1306683/1‑140 (MQ=255) caTTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGat < 1:1163908/140‑1 (MQ=255) caTTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATCGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGat < 1:1186/140‑1 (MQ=255) aTTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAggg > 1:181901/1‑127 (MQ=255) aTTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAggg < 2:181901/127‑1 (MQ=255) aTTGAAAGACGATCAGGGGCGGGGGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGata > 1:7754/1‑140 (MQ=255) ttGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGatat < 1:1115966/140‑1 (MQ=255) tGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGatat < 1:611160/139‑1 (MQ=255) tGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGatat > 2:611160/1‑139 (MQ=255) tGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATg > 1:114926/1‑140 (MQ=255) tGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATg > 2:955577/1‑140 (MQ=255) tGAAAGACGATCAGGGGCGGGGGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATg > 1:169008/1‑140 (MQ=255) gaaGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAg < 1:1354764/139‑1 (MQ=255) aaaGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAg < 1:1004303/140‑1 (MQ=255) aaaGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAg < 2:413271/140‑1 (MQ=255) aaGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGc < 1:752580/140‑1 (MQ=255) aaGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGc < 1:622720/140‑1 (MQ=255) aGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCt < 1:314597/140‑1 (MQ=255) gATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGt > 2:452188/1‑140 (MQ=255) gATCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGt > 1:748024/1‑140 (MQ=255) aTCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTg < 1:969760/140‑1 (MQ=255) aTCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTg > 2:38833/1‑140 (MQ=255) aTCAGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTg < 1:417920/140‑1 (MQ=255) aGGGGCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTgaag > 2:469357/1‑140 (MQ=255) gggCGGGTGGTTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTgaagaa < 2:1145859/140‑1 (MQ=255) gggTGGTTTCCTATGAAAAACTTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATc > 1:146196/1‑140 (MQ=255) ggtggtTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGGATATCa > 1:852507/1‑140 (MQ=255) ggtggtTTCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCa > 2:632948/1‑140 (MQ=255) ttCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGccc > 1:303776/1‑140 (MQ=255) ttCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGccc > 2:1144343/1‑140 (MQ=255) tCCTATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCa > 2:744536/1‑140 (MQ=255) tATGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTa < 1:469357/140‑1 (MQ=255) aTGAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTAt < 1:632948/140‑1 (MQ=255) gAAAAACGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCg < 1:1225093/140‑1 (MQ=255) aaaaaCGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGcc < 1:1174034/131‑1 (MQ=255) aaaaaCGTCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGcc > 2:1174034/1‑131 (MQ=255) | GTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACATCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCG > NC_000913/1507288‑1507556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |