| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,970,274 | A→G | I237I (ATT→ATC) | tap ← | methyl‑accepting chemotaxis protein Tap |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,970,274 | 0 | A | G | 83.3% | 222.4 / 30.4 | 96 | I237I (ATT→ATC) | tap | methyl‑accepting chemotaxis protein Tap |
| Reads supporting (aligned to +/- strand): ref base A (7/9); new base G (29/51); total (36/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.66e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
CCTGCGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATGCTGATAAAC > NC_000913/1970137‑1970412 | ccTGCGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGAt > 1:855/1‑140 (MQ=255) tGCGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCg > 1:1244649/1‑140 (MQ=255) gCGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCgg < 1:357362/140‑1 (MQ=255) cGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGa < 2:1366928/140‑1 (MQ=255) cGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGa < 2:1244649/140‑1 (MQ=255) aaTCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGAcgcg < 1:341030/140‑1 (MQ=255) aaTCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGAcgcg < 1:356422/140‑1 (MQ=255) aaTCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGAcgcg < 1:1131877/140‑1 (MQ=255) tctcCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGcc < 2:393748/140‑1 (MQ=255) tctcCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGcc > 1:897984/1‑140 (MQ=255) tctcCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCATCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGcc > 2:332505/1‑140 (MQ=255) cgATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGCTCTCATTTCCACCACATACCGCGATTGGACGCGCCAGATTa > 2:789463/1‑140 (MQ=255) gATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTAc > 2:1357577/1‑140 (MQ=255) aTACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTAcc < 1:726179/140‑1 (MQ=255) aCCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCg > 1:1028218/1‑140 (MQ=255) ccAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCgc > 1:954502/1‑140 (MQ=255) aTGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTTCGACCCTATACCCCGATCCGACGCGCCAGATTAccccccgc > 2:1090280/1‑135 (MQ=255) tgtgCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCgcagca < 1:670324/140‑1 (MQ=255) tgtgCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCgcagca < 2:1278610/140‑1 (MQ=255) cATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGAGGTTTCATTACGACCATATAACCCGCTCTGATGCGCCAGATTACCCGcaacaacgg > 2:912881/1‑137 (MQ=255) ctcCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGt > 1:858294/1‑140 (MQ=255) ctcCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGt > 1:1265937/1‑140 (MQ=255) tcCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTc > 1:1195271/1‑140 (MQ=255) ccTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCa > 2:1110401/1‑140 (MQ=255) tGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCaaa < 1:789463/140‑1 (MQ=255) ggCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCaaaa > 2:261283/1‑140 (MQ=255) ttCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATgg < 1:1090280/140‑1 (MQ=255) cccTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATTTACCGCAATCGGACGCGCCCGGTTAACCGCAGCAATGCTGTCAAAATGGCt > 2:489749/1‑140 (MQ=255) ccTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTa < 1:1113177/140‑1 (MQ=255) ccTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTa > 2:629301/1‑140 (MQ=255) cTTACGCACATCACTTACCGTCCCACGCAAAGCCTTCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTAc < 1:691980/140‑1 (MQ=255) cTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTAc < 1:738381/140‑1 (MQ=255) cTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTAc < 2:1265937/140‑1 (MQ=255) cGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGAt < 1:856521/140‑1 (MQ=255) cacaTCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATaa < 1:1307887/140‑1 (MQ=255) cACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGcc < 2:855/140‑1 (MQ=255) cACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGcc < 2:730686/140‑1 (MQ=255) cTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAg < 1:1062282/140‑1 (MQ=255) ttACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGt > 2:838903/1‑140 (MQ=255) ttACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGt > 2:638561/1‑140 (MQ=255) ttACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAg > 2:1284217/1‑139 (MQ=255) ttACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAg < 1:1284217/139‑1 (MQ=255) tACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTg > 2:1099688/1‑140 (MQ=255) aCCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTgg > 1:283573/1‑140 (MQ=255) ccGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATGCCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGt < 1:912881/140‑1 (MQ=255) ccGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGt > 2:1386502/1‑140 (MQ=255) atCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTg < 1:332505/139‑1 (MQ=255) cccACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTTCGACCATATACCGCGATCGGACCCGCCCGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCCGTGGTTGaa > 2:804410/1‑140 (MQ=255) cccACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGCCCATATAACGCGATCCGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCCATAATAGCCAGTGGTTTaa > 2:680767/1‑140 (MQ=255) cccACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACCACCCTATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGaa > 1:938899/1‑140 (MQ=255) ccACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAAc > 1:315343/1‑140 (MQ=255) ccACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAAc > 1:1020459/1‑140 (MQ=255) ccACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAAc > 2:1379757/1‑140 (MQ=255) aGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCt > 1:1100764/1‑140 (MQ=255) gCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCtt < 2:858294/140‑1 (MQ=255) ctgctgCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTgc < 1:1110401/140‑1 (MQ=255) ctgcATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGGAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGcgcg > 2:419180/1‑140 (MQ=255) ctgcATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGGTAATGGCCAGGGGTTGAAAAATCATCTTGcgcg > 2:1378386/1‑140 (MQ=255) ctgcATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGcgcg > 2:503837/1‑140 (MQ=255) aTGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTcca < 2:897984/140‑1 (MQ=255) ggTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTccacc > 1:113042/1‑140 (MQ=255) ggTCTTCAGACTGGCAAAAATGGCGGAGGTCTCATTACCATCCAATACCGCGATTCGACGCGCCCAAATAACCGCACCCACACTGTTAAAATGGGCACCCAACATGGCCTATGGTTTAACAATCATCCTTCGCGaccacc > 2:251197/1‑140 (MQ=255) gTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTccacca < 1:1379733/140‑1 (MQ=255) gTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTccacca < 1:251197/140‑1 (MQ=255) cAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAgcg < 1:638561/140‑1 (MQ=255) cAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAgcg < 1:1063831/140‑1 (MQ=255) cAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAgcg < 1:261283/140‑1 (MQ=255) aGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAgcgc < 1:1274166/140‑1 (MQ=255) aGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAgcgc < 2:1100764/140‑1 (MQ=255) aCTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGGAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCAc < 1:419180/140‑1 (MQ=255) aCTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCAc < 1:503837/140‑1 (MQ=255) aCTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCAc < 1:1378386/140‑1 (MQ=255) tGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActg < 2:113042/140‑1 (MQ=255) tGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActg < 1:459998/140‑1 (MQ=255) tGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActg < 1:1379757/140‑1 (MQ=255) tGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActg < 1:1386502/140‑1 (MQ=255) tGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActg < 1:532118/140‑1 (MQ=255) ggCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActgc > 1:370820/1‑140 (MQ=255) ggCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActgc < 2:1081257/140‑1 (MQ=255) ggCAAAAATGGCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActgc < 1:838903/140‑1 (MQ=255) ggCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCAc < 2:805609/137‑1 (MQ=255) ggCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCAc > 1:805609/1‑137 (MQ=255) cAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActgctg < 1:1099688/140‑1 (MQ=255) cAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCActgctg > 2:253880/1‑140 (MQ=255) gCGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGAt < 2:1195271/140‑1 (MQ=255) cGGTGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATc > 2:918354/1‑140 (MQ=255) tGATCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATcgcc < 1:664782/140‑1 (MQ=255) aTCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATcgccgc < 2:315343/140‑1 (MQ=255) aTCTCATTACGACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATcgccgc < 2:370820/140‑1 (MQ=255) aTCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATcgccgc < 1:1436696/140‑1 (MQ=255) gACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATc > 1:261514/1‑140 (MQ=255) gACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATc > 1:1049162/1‑140 (MQ=255) gACCATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATc > 2:164226/1‑140 (MQ=255) ccATATACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCAt > 1:1274774/1‑140 (MQ=255) cATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATg < 2:745724/140‑1 (MQ=255) atgtaCCGCGATGGGACGCGCCAGATTACCGGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTACGCGTCCACCACAGCGCACTTCTGATGTAGGGCGCCGCAACAATAATCATGc < 2:1049162/137‑1 (MQ=255) atatACCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATGc < 2:938899/140‑1 (MQ=255) tataCCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATGCt > 1:401027/1‑140 (MQ=255) tataCCGCGATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATGCt > 2:514029/1‑140 (MQ=255) cAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATGCTGATAAac > 2:1286818/1‑140 (MQ=255) | CCTGCGACAATCTCCGCGATACCAATGTGCATCTCCTGGCTTCCCTTACGCACATCACTTACCGTCCCACGCAAAGCCTGCTGCATGGTCTTCAGACTGGCAAAAATGGCGGTGATCTCATTACGACCATATACCGCAATCGGACGCGCCAGATTACCCGCAGCAATGCTGTCAAAATGGCTACCGATAATGGCCAGTGGTTGAACAATCATCTTGCGCGTCCACCACAGCGCACTGCTGATGTAGATCGCCGCAACAATAATCATGCTGATAAAC > NC_000913/1970137‑1970412 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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |